Hippoglossus stenolepis (Pacific halibut): 118124618
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Entry
118124618 CDS
T08308
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118124618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118124618
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118124618
03012 Translation factors [BR:
hsp03012
]
118124618
04131 Membrane trafficking [BR:
hsp04131
]
118124618
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118124618
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118124618
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118124618
Translation factors [BR:
hsp03012
]
Eukaryotic type
Elongation factors
118124618
Membrane trafficking [BR:
hsp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118124618
Exosome [BR:
hsp04147
]
Exosomal proteins
Proteins found in most exosomes
118124618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
118124618
NCBI-ProteinID:
XP_047200148
LinkDB
All DBs
Position
17:3221838..3225529
Genome browser
AA seq
461 aa
AA seq
DB search
MGKAKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETTRYCVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHGLLAYTLGVKQLIIGINKMDNTEPPYSQSRFEEIKKEVSIYINK
IGYKDSAVAFVPISGWHGDNMIETSEKMSWYKGWKVERKEGNGSGTTLLEALDSILPPSR
PTEKALRLPLQDVYKISSIGTVPVGRVETGILKPGMLVTFAPPNLTTEVKSVEMHHEALP
EALPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPLEAESFKAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFKELVEKIDRRSGKKLEADPKFIKSGDSAIVLMKPSKPLVVEAFSEYAP
LGRFAVRDMRQTVAVGVVKSVEKKHLTSAKVTKSAQKVQKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggcaaagatccacatcaacatcgtggtcatcggccatgtcgactctggaaag
tccacctccaccggacacttgatctacaagtgcggaggaatcgacaagaggaccatcgag
aagttcgagaaggaagctgccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgacatctctctgtggaagttt
gagaccacaaggtactgtgtgaccatcattgatgctcctggacacagggacttcatcaag
aacatgatcactggaacctctcaggccgactgtgccgtgctgatcgttgctgctggtgtt
ggtgagttcgaggctggtatctccaagaacggccagacccgtgagcacggcctgctggcc
tacaccctcggtgtgaagcagctcatcattggtatcaacaagatggacaacaccgagccc
ccttacagccagtcccgtttcgaggagatcaaaaaagaagttagcatctacatcaacaaa
atcggctacaaagatagcgctgttgctttcgtccccatctctgggtggcacggagacaac
atgatcgaaactagtgaaaagatgagctggtacaaaggatggaaggttgagcgcaaggag
ggtaatggcagtggaaccacactgctggaagctctggactccatcctgccaccttcccgc
cccacagaaaaggctctccgtctgcccctgcaggacgtctacaaaatctcaagtattgga
actgtacccgtcggtcgtgttgagactgggatcctgaagcctggtatgctcgtcaccttc
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgaggctttgccc
gaggctctccccggtgacaacgttggcttcaacatcaagaacgtgtctgtcaaggagatc
cgtcgtggatacgttgctggagacagcaagaacgacccacctctggaagctgaaagcttc
aaagcccaggtcatcgtcctgaaccaccccggacagatctcaaatggttacaccccagtg
ctggattgccacacagctcacatcgcctgcaaattcaaggaacttgtggagaagatcgac
cgtcggtctggtaagaagctcgaagctgaccccaagtttatcaagtctggagattctgcc
attgtcctcatgaagccttcaaaacccttggtcgttgaggccttctccgagtatgcccca
ctgggtcgctttgctgtgcgagacatgaggcagactgtggccgttggcgtcgtcaagtct
gtggagaagaagcacctcacatctgcaaaggtcaccaagtctgcacagaaggtacagaag
aaatga
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