Hippoglossus stenolepis (Pacific halibut): 118124743
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Entry
118124743 CDS
T08308
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118124743 (snx13)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118124743 (snx13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
Motif
Other DBs
NCBI-GeneID:
118124743
NCBI-ProteinID:
XP_035038709
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All DBs
Position
17:12296104..12317926
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AA seq
998 aa
AA seq
DB search
MSNDPRERISTSQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFVGGGFAVTL
LYGKINSEKHLEKCEHSYLPPTQIGIVKTLDEMKLEMKPIRIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFILEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSNKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPPELEAVKDKVVEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLQSGKEVDALKLAANFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMQGWQKDGKKQPSATKGLLKAAALGVFEQYLSEKASPRVQVEEESVTKL
GEKLQKEDPTPEIFDEIQRQVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDESMHLHAFISDTADACLPGFWGAAGVCNDHGK
TYALYAITVFRRNQDGSEDCWKTYRRYSDFHDFHMRITEQFENMASILKLPGKKTFNNMD
RDFLEKRKKDLNAYLQLLMNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKFLHNPAH
KKLPNQHMTSLVEIDTFVNPLKSSMRNVSNAVKALPDSLAEGMTKVSDNMGRMSERLGQD
LKQSILKGPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRR
NIKNLLQQLIRATYGDTINRKIVDHVDYLTSPEQVADYVKKFRDSYWPNGILAETTPRRD
KSIRMRTRVAAKTSLLGIMPDELKHIIGADTTRKGILRVFDMFQYQPMNRRLVYVFLEGF
LETMFPQYKFPELFVKLHSRSPRIHRYSQKLKSASLKR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaccctcgagaacgaatttctacatcacaacaaacacaggccagtctatcc
atctggggatgggggggtcttggagtcgtgctgttcctcgtcacctttggaccctttgcc
atattctacctggccttttatatcttctgctttgttggagggggctttgcggtcactctg
ctctatggaaagatcaactcagagaaacacctggagaaatgcgagcactcttacttgcca
cccacacagattggtatagtgaagacattggatgagatgaagctagaaatgaagcccata
aggattgaccggagattgactggctccagttttatagatgaaccactacaacaggtgatc
cagttcgctctgagagactacatccagtactggtactacactctgagcgaagatgaatcc
tttatattggagatcagacaaacactgcagaacgcactcgtccagttctccacacggtcc
aaagaggtggactggcagccttactttaccactcgcctggtggacgactttgccacccat
ttacgtgtcttcagaaaagcccaggatcgcctcgctgacagagaggacaagcagagagac
ataacggaggagctggtggactcgttctttgaagccgaggtggagatggagaggaagatt
tgccgagacgtagtgtgcacttcaaacaaagacgaagaaggtttccttcgggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttcctaagggaggtgttggctcgtggtgtgctgcttcctctgatcaaccagctgagcgac
ccggactacatcaaccagtttgtcatctggatgattcgggactccagttgtaactatgaa
gccttcatgaacatactgaagttgacagacaaacctcctgagctggaggctgtcaaggac
aaggtggtggaagagctgcagtatctccgctccctggacactgctggagatgacatcaat
gtgatcaaaaaccagataaacagtcttctgtttgtgaagaaggtttgtgagaccaggatc
cagaggctgcagtctggcaaggaggtggacgccttgaagctggcagccaacttcggcaag
ctgtgtgttatccccctggatcacatcctcgtccacaacatagccctgcagttcttcatg
gacttcatgcaggcagcgggggcgcaggccgagctgtttttctggctcactgtggagggc
tacagggtgacggcacagcagcagctggaggccatgcagggctggcagaaagacggcaag
aagcagcccagcgccaccaaaggactgctgaaggccgctgcactcggtgtcttcgaacaa
tacctctctgaaaaggcatctcccagggtgcaggtggaagaggagtctgtaactaaactt
ggggagaagctgcagaaggaagatcccacgccggagatatttgacgaaatccagagacag
gtgtatgacatgatgctacgtgatgagcgctactacccctccttcaagcagagccctctg
tacgtccgcatgctcgcagagctggatatgttgaaagaaccaagttaccggggatctgac
gacggcgatggagagtctttcaatggctctcccacaggaagcataaacctatctttggac
gacttgtccaactcctgccatgatgaatctatgcaccttcatgccttcatctccgacaca
gctgacgcttgtctccccggcttctggggtgctgcaggggtttgcaacgaccacggtaag
acctacgcgctgtacgccatcactgtgttcagacgcaaccaggatggcagcgaggactgc
tggaagacctaccgccgctattcagacttccatgacttccatatgaggatcactgaacag
tttgagaacatggcgtcgatcctcaagctgccaggaaaaaagacattcaacaacatggac
agagacttcttagagaagagaaaaaaagacctcaatgcttacctacagttgctgatgaac
ccagagatggtgaaggcctgcccaactctgattccttatgtctacgacttcctagaaaac
aaggcctacagcaagggcaaaggagagttcgcacgaaagtttttgcataatcctgctcac
aaaaaactacccaaccaacatatgacctccttggtggagatagacacatttgtaaatcct
ctgaagagctcaatgaggaacgtgtccaatgcggtgaaggccctgccggacagtctggct
gaaggaatgaccaaggtatctgacaacatgggacgcatgtcagaaagactgggtcaggac
cttaaacagtccatactgaaggggcccccactcctccccaagtcagacatcgaccctgaa
cactgtcgagtctccgcacagctcgatgacaacgtggacgataacatcccgctgagggta
atgctgctgctgatggatgaagtgtttgacctgaaggagaaaaatcagtggctgcgcagg
aacattaaaaacctgctgcagcagctcatcagagcgacatatggagacaccatcaacagg
aaaatcgtggatcatgtggactacttgacttcaccagagcaggtggctgactatgtcaag
aagttcagggattcctactggcccaacggtatactggctgagacaacgccccgccgggac
aagagcatccgcatgaggacacgagtagctgccaagaccagcctgctgggtatcatgcca
gatgaactgaagcacatcattggagcggacaccacgagaaagggcatcctgcgcgtcttc
gacatgttccagtaccaaccaatgaaccggcggctcgtctacgttttcctggagggcttc
ttggagacaatgttcccccagtacaaattccccgagctctttgttaagctgcactcccgc
tcaccgcgcatccacagatacagccagaaactcaaatcggcctctctcaagaggtga
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