Hippoglossus stenolepis (Pacific halibut): 118124816
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Entry
118124816 CDS
T08308
Symbol
sync
Name
(RefSeq) uncharacterized protein sync
KO
K10377
syncoilin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118124816 (sync)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
118124816 (sync)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6988
Filament
Motif
Other DBs
NCBI-GeneID:
118124816
NCBI-ProteinID:
XP_035038873
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Position
17:complement(15807466..15813813)
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AA seq
713 aa
AA seq
DB search
MEDMDDSISSAGFEPLFIKEEAGEPDRTLGGQRERSTPQSELPFPGTQLNQSALIKPYLH
EMDDLLKSCEDLTGIPFGSRFSESYTETSLSKSTHGQSKEEVAMESYRETSVSPHAYLST
SYIDTHMDGAEEDEQPEQGQLQGMGTIIGKREGSPQPEMPLTSAGSKLSNAMVQYEGQLL
GMLSMLESCMEEAGMDFEPQDWATDASQEYVHISKNPHHHSGTTLGPIQQKMPVKLETQP
MQKESWAVKHAEGDSMSEDSNGMTGSTTNGSQQNHLPCCDNMEESLERSGIMDQGFLDPH
LSYLRPSDSSDCNENYPLYCEGTKTQYMSHESTEREVDISETEIIDTELPAEERRELTMD
PIFLRTGSYELGELGSQMEECIQEVQRLEEKRNQLLAEVLELRGNKNREEEAEGSNGEEE
VTEEQMDSKVVELMDILKSEEEGRREERKKEIQSLREERAEEERRMWKVNLERQELQEEL
RKLKMRLFAMVRACTHSQASLNNQRREVELLKREEEKLQSLVLQLTEESCHLRSDKQQQL
LQLQTQRQAQTSSQNSNTQQELTECRRQSCGDIQQYLQGGLRALEHRYEPILLALLKRRE
ATAGALVKAKEQAQELRAQLRPLRDEIQKLKLQRACLEEKLKLIHLHRREDAGRNKETVY
FLEESSRELKTELKIQKKKTKDVEELRDRLTKQLLLYRAAIEDHNECDHEQET
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatggacgacagcatttcatccgctgggttcgagcctctcttcatcaaagaa
gaggctggggagccggacagaaccctcggaggtcaaagagagcgcagcacgccacaatcg
gaactccccttcccaggaacacagctgaatcaatcagctttaatcaagccatacctacac
gagatggacgacttgctgaagagctgcgaggacctcacaggaatcccttttggctcgcgc
ttctcagaaagctacacagaaacaagcctgagcaaatcaactcacggccagagcaaagag
gaggttgcaatggagagctacagagagacaagtgtatctcctcatgcctatctttccaca
agctacatagacacacacatggatggggctgaagaagatgagcagccagagcaaggccag
ttgcaaggcatgggcaccatcatcggcaagcgagaagggtctccgcagccagaaatgcct
cttacctcagccggcagcaaactgagcaacgctatggtgcagtatgagggccagctgctg
gggatgctgtccatgctggaaagctgtatggaggaggccgggatggactttgagccacag
gactgggcgacagatgcaagtcaagaatatgtgcacatcagtaagaatcctcatcatcat
agtgggacgacactggggcctattcagcagaagatgccagtgaagctggagacccagcca
atgcagaaagagtcctgggctgttaaacacgcagagggagattcaatgtccgaggacagc
aatggaatgacgggttcaacaaccaatggaagccagcagaatcacttgccttgttgtgac
aacatggaggaaagcctggaaaggtcaggaataatggatcaggggtttcttgatcctcac
ctaagttatttaaggccatcagactcatcagattgtaacgaaaattatccattgtactgt
gaagggacaaagacacaatacatgtctcacgaaagcaccgagagagaggtagacatatct
gagactgaaatcattgacactgaattgccagctgaagagagacgagagctcacaatggac
cccatatttctgagaactggtagctatgaattaggggagctggggtctcagatggaggag
tgcatacaggaagtacagcgcttagaggagaagagaaatcagctgttggcggaggtgctg
gaattgagagggaataaaaacagagaggaagaggcagaggggagcaacggtgaggaagaa
gtgacagaagagcaaatggacagcaaagtggtggagctgatggatatactgaagagtgag
gaagaaggaaggagggaggagagaaagaaggagatacagagcctcagggaggagagagca
gaagaggagaggaggatgtggaaggtcaacctggagagacaggagctgcaagaggagctc
aggaagctgaaaatgcgtctctttgccatggtcagggcgtgtacccacagccaggcttct
ctgaacaaccagcgccgtgaggtggagctgctaaagagagaggaggagaagctgcagtcg
ctggtgctccagctgacagaggaaagctgccacctcaggtcggacaaacaacagcagctc
ttgcaactacaaacacagcgacaggcccagacctccagtcagaactccaacacccagcag
gagctgaccgagtgcaggaggcagtcctgtggggacatccagcagtatttgcagggtgga
ctaagagccctggagcacaggtacgaacccattttgctggcgttgctgaagaggagagag
gccacagctggagcgctggtgaaggctaaagagcaggcccaggaactgagggcgcagctg
agacccctaagggatgagatccaaaagttgaagctccagagggcttgtttggaggagaaa
ctcaaactaatccacctacaccgcagagaggatgcaggtcgcaacaaggagacagtgtac
tttctggaggagagcagcagggaactgaagactgagttaaagattcagaagaagaaaacc
aaagacgtagaggagttgagagacagactcacaaaacaactcctgctttacagggctgcc
attgaggaccataatgagtgtgaccatgagcaggaaacataa
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