Hippoglossus stenolepis (Pacific halibut): 118124817
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Entry
118124817 CDS
T08308
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
hsp03083
Polycomb repressive complex
hsp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118124817 (rbbp4)
03083 Polycomb repressive complex
118124817 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118124817 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118124817 (rbbp4)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118124817 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
118124817 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
118124817 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118124817 (rbbp4)
PRC2.2
118124817 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118124817 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118124817 (rbbp4)
Chromatin remodeling factors
NuRD complex
118124817 (rbbp4)
NuRF complex
118124817 (rbbp4)
NuRF complex (fruit fly)
118124817 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
118124817
NCBI-ProteinID:
XP_035038874
LinkDB
All DBs
Position
17:15803561..15808556
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAGAYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASQYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECRPDLRLRGHQKE
GYGLSWNSNLSGCLLSASDDHTICMWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHIAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGATE
PEATA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagctggtgcatacgatgatgcggtggaggagagggtgatcaatgaa
gagtacaagatctggaagaagaacacccccttcctctatgacctggttatgacccacgcc
ttggagtggcccagcctcactgcccagtggctgcctgatgtctccaggccggaggggaag
gattacagtgtgcaccgactggtgctgggcacccacacatctgatgagcagaaccacctg
gtcattgccagtgtccagctgcccaacgacgatgcccagttcgacgcctcacagtatgac
agtgaaaaaggagagtttggaggtttcggctcagtgagtggcaagatcgagatagaaatc
aagatcaaccacgaaggagaggtgaaccgtgcccgttatatgccacagaatccctgcatc
atcgccaccaagacccccacctcagatgtgcttgtgtttgactacaccaagcatccctcc
aagccagatccctctggagagtgtcgccctgatctgcgtctcagaggtcatcagaaagag
ggctatggtctctcctggaattcaaatctgtctggctgtctactaagtgcatcagatgat
catacgatctgtatgtgggacatcagtgctgttccaaaggaggggaagatagttgatgcg
aagacgatattcaccggtcacacggctgtggtggaagatgtctcttggcacttgctgcat
gagtccctctttggatctgtagcagatgaccagaagctcatgatttgggacacacgttca
aacaacacctccaaacccagccatgctgtcgatgcccatattgcagaggtcaactgtttg
tcatttaacccgtacagcgagttcatccttgccactggctctgcagacaagactgtggct
ctttgggacctgagaaacctcaaattgaagctgcattcctttgagtcacacaaggacgag
atcttccaggttcagtggtcccctcataatgagaccattttggcttccagtgggacagat
cgtcgcctcaatgtctgggatctcagtaaaatcggagaggagcagtccccagaagatgca
gaagatggcccacctgagctactgtttatccacggaggccacacagccaaaatctctgac
ttctcctggaaccccaacgagccctgggtcatctgctctgtgtctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaacgatgaagatcctgaaggtgcaacagag
cctgaagccaccgcctaa
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