Hippoglossus stenolepis (Pacific halibut): 118124818
Help
Entry
118124818 CDS
T08308
Symbol
atxn1a
Name
(RefSeq) ataxin-1a isoform X1
KO
K23616
ataxin 1/1L
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118124818 (atxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
118124818
NCBI-ProteinID:
XP_035038875
LinkDB
All DBs
Position
17:complement(9659852..9744135)
Genome browser
AA seq
808 aa
AA seq
DB search
MKSNHERSNECLPPKKREIPACTFPSETRSITMPPASDSQRSENMAWLASVAGNESSVGG
HRSSSHSDGHHYKSLSSTSDSSTSSSSLRLVSSLPTVYTSPLSQSTVGGTVHYTQLPHNL
QFITSPYTAPYAGYISPQLLPPPPPPPPLSLSSSSHSMAAQRPSHTETASAPSQASKHDQ
HRASSGRTSMPPPSTDPHLHHTHMSTSLRTVPSTHHQGGIHLSPQSLHHHHTLGHGMSQV
LVQYMDGSNRNEDGGSRHRELHNGELERGRRFGASPEFSLSKSGNKSRDVNSSLTSYEAH
QLVLPSEYSTHDPSGLRTSVMLMHNSHGDHQLVPPRASPEKLTNCSPAHLEKGGIILGKP
VNRTSSSSNNTSSFTFPTPLSVDSLKAAVRTLSPQTVIQTTHSATEALSMGLPSSSIYPQ
APIIGYIAGGSGSQHTSISYHTSLQQHLLIPGAQPVIIPVSGGGVTTLEPVTSHMTSSTQ
ASFPSALPHTYIAASAPKGETLVTSSGSYHQVASGAVVPAQLHLPIVSAPQGLVAPSAPP
PPSNTVAPPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISNELKIDSSTVERIE
GSHTSPNVAVVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSV
GDVCISLTLKNLRNGSLKKTQPLELATPACVPASSHGHLKPPRAVYDTPQIFRHNERENG
ISQRGSGNGSGGGGPNVENGDGMFGERCAVSKGQAASIPKTGRKRRWSAPEGRKVEKTEE
EPPLTLPKPSFIPHEVKISIEGRSNIGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccatgaacgcagtaatgaatgtctgcccccaaagaagagggagatcccc
gcatgcactttcccatctgaaacccgttcaatcaccatgccacctgccagtgacagtcag
cgctcagagaacatggcctggcttgccagtgtggctgggaatgagagcagcgtgggtggg
caccgtagctccagtcattctgatgggcaccattataaatcgctctcctccacatcagac
tcttcaacctcctcttcgtcactgaggctggtctcatctcttcccacagtttatacatcc
cccttgtcacaatctacagttggcggaactgtccattacacccaactgcctcacaatctg
cagttcataacgtcaccttacactgccccgtacgcaggctacatctcccctcaactgctc
ccacctcctcctccacctccccccctctccttgtcgtcgtcgtcccactctatggccgca
cagagaccctcacacacagagacagcctctgctccttcgcaggcctccaagcatgaccag
cacagagcgtccagtgggcggacctccatgccaccgccttctacagacccccaccttcac
catactcacatgtccacttccctacggactgtcccgtcaactcatcaccaaggaggcatt
cacctctctccccagtcgctgcaccaccatcatactttgggtcatggaatgtcccaggtt
ttggtgcagtacatggacggatccaacaggaacgaggacggtggctctagacacagagag
cttcacaatggagagctggaaaggggccggcggtttggagcatcccctgagttcagcctc
tccaagtcggggaacaaatcacgggatgtcaattcttctttgacctcttatgaggcccac
cagctggtcctgccatctgaatactctacccatgatccctcagggctgagaacctctgtt
atgctaatgcacaacagccatggagaccaccagctggtaccacccagagccagccctgag
aagctgacaaattgttcccccgcacacttggagaaaggtggcatcatcctgggcaagcca
gtcaatcgcacatcatcctcctccaataacacctcctcgttcacgtttccaacaccattg
agtgtagacagtctgaaagctgctgtacgtacactctccccccagaccgttatccagacc
actcacagtgccacagaggcactttcaatggggctcccctccagcagtatctacccccag
gcacctatcatcggttacatcgcagggggcagcggaagccagcatacgtcaatcagctac
cacaccagcctacaacaacacttactcattcctggtgcccaaccagtcataatccctgtt
agtggaggtggagtcaccacattggaacctgtaacctcccacatgacatcatccacccaa
gcttcttttcctagcgcactcccacacacgtacattgctgccagcgctcccaaaggagag
actcttgtaacctccagtggctcgtaccaccaggtcgcttcaggtgcagtggtcccagcc
cagcttcatctccccattgtttccgcgccacaaggtttggtcgctccttctgctcctcct
cccccgtccaatacggtggcgcctccctcactccccccatatttcatcaagggctccatc
atccagctggccgacggggagctgaagcgcgtggaggatctgaagacagaggacttcatc
cagagtgccgagatcagcaatgaactgaagatcgactcgtccacggtggagcgcatcgaa
ggcagccacacctcacccaacgtagctgtggttcagttctctgttggtgagcaccgtgca
caggtaagcgtggaggtcttggtggagtatcccttcttcgtcttcggccaggggtggtct
tcgtgctgcccggaccggaccacccagcttctggagctgccttgcaccaagctttctgtg
ggcgacgtttgtatttcacttaccctcaagaacctgaggaacggatctctgaagaagact
cagcccctcgagctggccaccccggcctgtgtcccagcctcaagccacgggcacctcaaa
ccccccagagctgtttatgacactccgcagatctttaggcacaacgagcgggagaatggc
atcagccagcggggaagtgggaatgggagcggaggagggggccctaatgtggaaaacggg
gatggaatgtttggggaaagatgcgcagtttctaaaggtcaggctgccagcatcccaaaa
accggcaggaagcggaggtggtctgcccctgagggtcggaaagtggagaaaacagaagag
gagccacctttgaccctgcccaaaccttccttcatccctcacgaggtgaaaataagcatc
gagggaaggtcgaatattggcaagtga
DBGET
integrated database retrieval system
