Hippoglossus stenolepis (Pacific halibut): 118124861
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Entry
118124861 CDS
T08308
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118124861 (trim71)
04121 Ubiquitin system [BR:
hsp04121
]
118124861 (trim71)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118124861 (trim71)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118124861 (trim71)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118124861 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
TEN_NHL
zf-RING_5
zf-C3HC4
Ig_GEX2_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
118124861
NCBI-ProteinID:
XP_035038937
LinkDB
All DBs
Position
17:complement(16131941..16166797)
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AA seq
833 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKVSISEAGMDSLPSSNFLFSNLLDVVVSSEEQIQSKNG
HHHHHHRGGLGVGSSGFHLPHGGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDNCV
RAHQRVRLTKDHFIERLGESLHLGRVNSNSNQGQPGVSVSLAQSLQNNFALLSLFQDRMS
FCQHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAEQGR
QAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKS
LYLQVEKLHQSLTKLDSTIAAVSQVLDEGHHLDVLLARERMLTQIHELKALRGLLQPQED
DRFMFTPPDQALYIATQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVIGYDHDGEP
RLSGGDTVSSIVMSVGDGNLSAAEVTDHQNGSYTVSYVPKCEGELLVSVLVCNQHIQGSP
FKVIVKSGRSYGSLGSQVASFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRVQIFKP
CGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGT
KNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFAADGSFLNKYGFEGALWKHFDSPRGVAF
NHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRN
HRVQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccagactcggacctgcagacgtgcccgctctgcaaggagctgtgcggc
tcctctgctcccatctcctccagctcgtctacctcctcctcctcctcgcacacctcgtcc
tcctccagccagaccaccaggagactccacgtcctgccctgcctccacgccttctgcagg
cagtgcctcgagggccagcgcagtcccggggacccgctgaagctgcggtgccccacctgc
gaccagaaggtgtccatctccgaggccggcatggactccctgccttcctccaacttcctc
ttcagcaacctgctggacgtggtggtgagctccgaggagcagatccagagcaagaacggc
caccaccaccatcaccaccgaggaggcctaggtgtgggctcctctggcttccatcttccc
catggaggcctgctgcatccacaccacctgggtgagcctcagtgtagctcctgtgatgag
gagaacccagccacctcccactgccttgactgccaggaatatctgtgtgacaactgtgtg
cgggcacaccagcgggtgaggctgaccaaggaccacttcattgagcgcctgggagagagt
ctccatctgggccgggtcaactccaacagcaaccagggccagccaggggtgtccgtgtcc
ctcgcccagtccctgcagaacaactttgccctgctgtcccttttccaggaccgcatgagc
ttctgtcaacaccacgacaatgaggtgttcctgttcttctgcgaaacctgctcggtgcct
atctgcagggagtgcagtgtgggccgtcacatgggccacacctttgtttacctgcaagac
gccgtgcaggactgcagagccatcaccatccagctgctggcagatgcagaacaaggacga
caggctgtgcagctaagcatggagaaggtccaggccatggcagagcaagtggagataaag
gcaaaggtggtgcagactgaggtgaaggcactcgtcctgagacacaagaaagcgctggag
gagagggagtgtgaactactgtggaaggtagagaagatccgtcaggtgaaggccaagtct
ctgtacctgcaagtggagaagctgcaccagagtctgaccaagttggacagcaccatagcc
gcggtcagccaggtgctggatgagggccaccacctcgacgtgctgctggctagggagcga
atgctcacccagatccatgagctcaaggccctcaggggcctgcttcagccgcaagaggac
gaccgcttcatgtttactcctccagaccaggctctgtacatagccacccagtccatggga
ctgatcagtagtggagcctttgccccggtcaccaaagcccacggtgagggtctgaagagt
gcgcttcgtggcaagcctgcctcctttactgtgattggatatgaccatgatggcgagcca
cgtctctccggcggggacacggtgtcttcaatagtcatgtcagttggcgatggtaacctg
tctgcagcagaggtaacagaccaccagaatggctcatacaccgtcagctacgtgcccaag
tgtgaaggggagctcctcgtttcagtgctggtgtgtaaccagcacatccagggcagcccc
tttaaggtgatcgtgaagtcggggcgcagctatgggtctctgggttcacaagtcgcatcc
ttcgggtgtgagggggaaggagacggtcagctctgtcgtccctggggcatcagcgtggac
aaggagggctacgtggtggtggctgatcgcagcaacaaccgtgtacagatattcaagcct
tgtggcgccttccaccataagtttggctctctgggttctcggcctggtcagtttgatcgt
ccagctggggttgcttgtgacagtcagagacgaatcattgtggctgataaggacaatcac
cgtgtacaggtgtttacttttgagggccagttcctgctcaagtttggggaaaagggtacc
aagaatgggcagttcaattatccctgggatgtggctgtcaactctgagggtaagatcctg
gtctccgacaccaggaaccaccgcgtgcagctcttcgccgccgacgggtccttcctcaac
aagtacggctttgaaggggccctgtggaaacactttgactctcccagaggagtggccttt
aaccacgaagaccacctggtggtgaccgacttcaacaaccaccggctcctggtcatccgg
cctgactgccagtcggctcgctttctgggctccgagggcacagggaacgggcagttcctg
cggccccagggtgtcgccgtggaccaggagaaccgcatcatcgtggccgactcccgcaac
cacagagtccaagtgtttgagcccaatggaaacttcttatgcaaatttggcacacagggg
agcggctttggacagatggatcgcccctccggtgtggctgtaacgcctgacggagtcatt
gtggttgttgactttggaaataatcgcattctcaaattctaa
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