Hippoglossus stenolepis (Pacific halibut): 118124872
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Entry
118124872 CDS
T08308
Symbol
tshz1
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118124872 (tshz1)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118124872 (tshz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2_2
zf-C2H2
zf-C2H2_6
Zap1_zf1
Homeobox_KN
DUF7086
zf-C2H2_3rep
DUF760
DUF5043
Motif
Other DBs
NCBI-GeneID:
118124872
NCBI-ProteinID:
XP_035038953
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All DBs
Position
17:8900581..8930449
Genome browser
AA seq
1134 aa
AA seq
DB search
MPRRKQQAPRRSVAYGPDDELALDKIDEEEHLQDDGLSLDGQDADYLFNEDEDGRDHFSC
QNSPLSNGTNPDAGYASPLSTTSDQLVDLKTMSSSNDGQEKLEEKLEEKLEESAESINGL
SLQDSLTKMKAVYANLISDASWSSIAMDMLKQGNNVAASNGNGSNHKGSNGFLNSHSPGS
IHTKGRCSSSNASATSNITTSSTTTRTLSSSSHSGTSLSSGSSGGLAYDWHQAALAKTLQ
HTPYQLLPEPSLFSTVQLYRQNNKLYGPVFTGASKFRCKDCSGAYDTLVGLTVHMNETGH
YRDDNKDKEDDRSKKWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK
HYQKVPLKEPMPGLTSKLVPPTKKRAFQDLMSPSSPESVSSGILMGESPKDQKMANPYVT
PNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNSASKK
GKQLVFDPIIEEKIQSIPLPPTTTRLPAPNGKSQNDSPLPPSSPEDRNEERKDELIGEEK
IEFREPEKKIKEEKEDPPEKADKPRKAISYQYLREEDLEETPKGGFDIIKSLENTVSSAI
TKAQTGTPTWGGYTSIHAAYQLHGSIRSTLPSSAQVQPLFSSNSLKAFSADLGALIHSPN
SPSPPPSHKSNVLAMEELVEKVTGKRPVKNEKEEKHLENKSRSVKSPLTNLKDKRASPNP
DNISKAKKTSAAEDQTESRGKDGEQTEREVDRHIKSEVDSPKKPVSNGCNNLSIITDHSP
EQPLVNPLSALQSIMNNHLGKASKVATPFSDPFAMLHKINSNSAPNKSAEPVSQFHEEED
DQPMDLTKSKNTNGSTTKGTSTSPHNNSSSNSKPAFRAFSQSSSPPLRENALMDISDMVK
NLTGRLTPKSTTPSSISEKSDGDSCTFEDGLEELSPIQRRKGRQSNWNPQHILILQAQFA
SSLRETPDGKLVITDLGPQERVHICKFTGLSMTTISHWLANVKYQLKRTGSTKFLKNIDS
CQPLFLCSDCASQFRTPSSYIHHLESHLGFTLKDLSKLSIDLLEQQSVSRIEDKTFSLSP
SGLTEEDTGSIYQCKLCNRTFLSKHAIKLHLCKSHGKSPEDHLIFVKELEKFDK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagaaagcagcaagcgccgcggcggtcagtagcttatggacccgatgacgaa
cttgcattggacaaaattgatgaagaggaacatctgcaggatgatggcctctctctggat
ggtcaagacgcagactatctgttcaatgaagacgaggatggaagagatcatttcagctgc
caaaactctccactcagcaatggcaccaacccagacgcagggtatgcctccccactcagt
accaccagtgatcaattggtggaccttaagaccatgtcttcctctaatgatggtcaagaa
aagttagaggagaagctagaggagaagctagaggaaagcgcagagtccatcaatggcctc
tcactacaggacagtctgacgaaaatgaaagccgtctatgcaaacctgatctcggatgcc
tcctggtccagcattgctatggacatgcttaaacaagggaacaatgttgccgctagcaac
ggcaatgggagcaatcacaaagggagcaatgggttcctgaacagtcacagcccagggagc
atccatacgaaaggcagatgtagcagtagcaatgcctcggccacttctaatattaccacc
agcagtaccaccacgagaacactgtcaagcagcagccacagtggcactagtctaagttct
ggcagctcaggaggactagcctatgactggcaccaggcagcattggccaaaactctacag
catactccataccaactccttcctgagcctagccttttcagcaccgtgcagctttacaga
caaaataataagctctatggcccggtgtttacaggtgccagcaagttcaggtgcaaggac
tgtagtggggcctatgatactttggttggcctgacagtgcatatgaatgagacaggccat
taccgtgatgacaataaggataaagaggatgatcgaagcaagaagtggtccaagccacgc
aagcgttccctgttagagatggaaggcaaggaagatgcccagaaagttcttaaatgcatg
tactgtggccactcttttgaatccttgcaagaccttagtgttcacatgatcaaaacaaaa
cactatcagaaagtgcctctaaaagaaccaatgccaggcctcacctcaaagctggtaccc
ccaaccaaaaaaagagcatttcaagacttgatgtccccaagctcacctgagtctgtctca
tctggtatactcatgggagagtctcccaaagaccaaaaaatggctaatccctacgtcacc
cctaacaatcgatatggttaccaaaatggtgccagctatacttggcagtttgaggcacgg
aaggcacaaattcttaaatgcatggaatgtggcagttcacatgataccttgcaacaattg
acagcccacatgatggtcacgggacactttctgaaagtcacaaattcagcctctaagaaa
ggtaagcagttagtttttgatcctatcattgaggagaaaattcagtccattcctctgcca
ccaactaccacacgactcccagcacccaatgggaagtcacagaatgactccccattgccg
ccctctagccctgaggaccgaaatgaagaaagaaaagatgaattgattggggaagagaaa
atagaattcagggaaccagagaaaaaaatcaaagaggagaaggaagaccccccggaaaaa
gctgataaacctagaaaggctatatcttatcagtatttgagagaggaagacttggaagag
acacctaaaggtggctttgacattatcaagtctttagagaacacagtttcaagtgccatc
accaaggcccaaacaggcacaccgacctggggtggatacacaagcattcatgccgcctat
cagctccacggatctataaggtctaccttgccctcatcagcacaggttcaacctttgttc
agcagcaacagcttgaaggcattttccgctgatctaggtgctctgatccattcaccaaat
agcccctctccacctccaagtcacaagagcaacgtgctggccatggaagagctagtagaa
aaagtgacagggaaaagaccagtaaagaatgaaaaagaggaaaaacatctagagaataag
agtaggtctgtgaagtcaccactgacaaatctaaaggataaacgagcttcaccaaatcct
gacaatatctcaaaggcaaagaaaacctctgctgcagaggaccagactgagtcaagaggc
aaagatggagagcagacagagagagaagtagacagacatattaagagtgaagttgattca
ccaaaaaagcctgtaagcaacggctgcaataacctgagcatcatcacagatcattctcct
gaacaaccactcgtgaaccctctcagtgctttgcagtctatcatgaacaaccatttggga
aaagcctcaaaagtggcaacacccttcagtgacccgtttgcaatgcttcacaagatcaac
agcaactctgctccgaataagtcagcagagccggtgagtcagtttcatgaggaggaggat
gatcagcccatggacttgacaaaatccaaaaacaccaatggcagtaccactaagggtact
tctacttcaccacacaacaacagcagtagcaacagcaaaccagctttccgagctttctct
cagtcttcatcgccccctctgcgggagaatgctttgatggatatttcagacatggtgaaa
aatctgactggccgtttgacaccaaagtctacaaccccatcttccatctctgagaaatct
gacggagacagctgtacttttgaggacggcctggaggagctgtctcccatccagagacgg
aaaggtagacagtcaaactggaatcctcaacacatcctgattctccaggcccagtttgcc
tccagtctcagagagactcctgatggaaagttggtgattactgacttggggccccaggaa
cgggtccacatctgtaaattcactggtctctccatgactactatctctcattggctggcc
aatgtaaaataccagttaaagcggacaggaagcacaaagttcctaaaaaatattgactct
tgccagcctctgtttttgtgcagtgactgtgcatcccagttcaggactccttcctcctac
attcaccatttggagtcccatcttgggttcaccctgaaggacctctccaagctatccata
gacttactagagcagcaatcagtcagcagaatagaggacaagactttcagtctgagtccc
tctggactcacagaagaagacactggctccatttatcagtgcaaactgtgcaatcggaca
tttttgagcaaacatgcaatcaaattgcacctttgcaaatcacatgggaagtcacctgag
gaccacctcatctttgtgaaagagctggaaaagtttgacaaataa
DBGET
integrated database retrieval system
