Hippoglossus stenolepis (Pacific halibut): 118124877
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Entry
118124877 CDS
T08308
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118124877 (irx1b)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118124877 (irx1b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
118124877
NCBI-ProteinID:
XP_035038959
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All DBs
Position
17:16626590..16630473
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AA seq
459 aa
AA seq
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MSFPQLGYPQFLSASHEVYGGERPASAREGAAEGGVSSSATAAAVGSMLGMYGNPWVAHN
YSAFLPYSGATDLALISQMGSQYELKDSPGSHPASLPVHAAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDEPGKNGSDDEDEDEEIDLETVDIERPEEQCAQEEQGSAKVEA
EAGLSAREQASEPRSPESGRTLSVEGLRGVEAAISLNKSPVVKLAVDHSPSRQECQRPAQ
SKPKIWSLAETATAPDSSHKPSPAAHAHHPALASAGHPALLPGHGIYTCQIGKLHNWANA
AFLNANSLLNMRSLLGGAPAGHLPLHGAVPAARHDARPVAAGPGASGTEDDSDVESSGSF
SPKRDDEESNHRPDSLKFQLITDRPHHGTASQRVLTSTL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcaactggggtacccccagttcctcagcgcctcccatgaggtgtacggg
ggcgagcggccggcctctgcccgggagggagctgccgagggcggcgtgagctcctctgcc
accgccgcggctgtcggctccatgctggggatgtacgggaacccgtgggtggctcacaac
tacagtgcctttctgccgtacagcggagccacagacctcgccctcatctcccagatgggc
tcccagtatgagctgaaggacagcccgggctcccacccggcctccctgcctgtccacgcc
gctcagggcttctacccgtacggccagtatccgtacggggacccgtcgagggccaagacg
gccacgcgggagaccacgagcaccctgaaggcctggctgcaggagcaccagaagaacccg
taccccaccaagggagagaagatcatgctcgccatcatcacccggatgacgctcacacag
gtgtcgacgtggttcgccaacgcgcgcagacgcctgaagaaggagaacaaggtaacctgg
ggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggacgagccc
ggcaagaacggcagcgacgacgaagacgaagatgaggagatcgatctggaaactgtggat
atcgagagacccgaggagcagtgcgcacaggaggagcagggctccgccaaagtcgaggca
gaggcgggcctgtccgccagagagcaggcctcggagcctcggagccccgagagcggcagg
acgctttcagtggagggcctgagaggagtggaggcggccatttctctcaataaatcgccc
gttgtcaaactcgcagtggatcattctcccagcagacaggagtgccagagaccggctcag
agcaaacccaaaatctggtccttggccgagaccgccacagcccccgacagctctcacaaa
ccttcccctgcggcccatgcgcatcacccggctttggcctcggccggccacccggccttg
ctcccgggtcatgggatatatacgtgccagattggcaagcttcacaactgggccaacgcg
gcttttctgaacgccaactctcttttgaacatgaggtcgctcctcggcggggcgccggcc
ggacacctgcctctccacggcgcagtgccggctgcgcgtcatgacgcacggccggttgcg
gcgggcccgggagcttcgggaacggaggacgacagtgatgtcgagtcgtcgggaagcttc
agtccaaaacgagatgacgaagagagcaaccacaggcccgattccctgaagttccagctg
atcactgacagacctcaccatggcacagcatcacaacgagtcctgacatcaacgttatga
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