Hippoglossus stenolepis (Pacific halibut): 118124897
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Entry
118124897 CDS
T08308
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118124897 (matn1)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
118124897 (matn1)
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
Plasmod_Pvs28
EGF_3
hEGF
Copine
BRISC_FAM175B_helical
EGF_LRP2
HSBP1
Motif
Other DBs
NCBI-GeneID:
118124897
NCBI-ProteinID:
XP_035038992
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All DBs
Position
17:11287743..11292654
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AA seq
491 aa
AA seq
DB search
MTPTPSLFMLLVLGLMGAQATVDVRTAAAMAAGLCKTRPTDIVFIVDSSRSVRPSEFEQV
KVFLAKVIEGLDVGPNATRVGVVNYASRVKNEVSLKTHRTKAGLIKAVTKIEPLSTGTMT
GLAIQFALNVAFSEAEGARVKSPDISKVAIIVTDGRPQDTVKEIAARARDAGIEIFAIGV
GRVDMSTLKQMASDPLDDHVDYVESYSVIEKLTKKFQEAFCVSDLCATGDHDCEQVCISS
PGSYKCACKDGFTLMDNGRSCSACSNSATDVVFLIDGSKSVRPENFELVKKWINQIIDKL
DVSDSKAHVGLVQYSSAVKQEFPLGRYNNKKDLKDAVKKMAYMERGTMTGQALRYLVDNS
FNPGHGARPGVAKVGIVFTDGRSQDFIGEAAKKAKENGFKMYAVGVGNAVEDELREISSE
PTAEHYFYTADFKAMTQIAKKLQINICQEDDPCECDSLVKFQKKVEDALQALTKKLESMS
KRIAMLENKIV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctaccccgtcgctgttcatgctgctggtgcttgggctaatgggagctcaagcc
accgtagacgtccgcaccgctgccgccatggcggcaggtttgtgcaaaacccgtcccaca
gacatcgtgttcatcgtcgacagcagtcgcagcgttcgcccttcagagtttgagcaggtc
aaggtcttcctggcgaaggtcattgagggcctggatgtcggacccaacgccacccgtgtg
ggagttgtcaactacgccagccgtgtcaagaacgaggtgtcactgaagactcaccgcacc
aaagctggactgatcaaggccgtgaccaagatcgagccgctgtccactggaacaatgact
ggactggccatccagttcgccctgaacgtggccttcagcgaggcagagggcgctcgtgtc
aaatctcctgacatcagcaaggttgccatcattgtgacagacgggcgtccccaggacacc
gtgaaagaaattgctgcccgtgcccgcgatgccggcattgagatttttgccatcggcgtg
ggacgtgtggacatgagcactctgaagcagatggccagtgatcctctggacgaccacgtg
gactacgtggagagctacagcgtcatcgagaagctcaccaagaagttccaggaggcgttc
tgtgtgtcggacctgtgtgccactggggatcatgattgtgagcaggtatgcatcagcagc
cctggatcatacaagtgtgcctgcaaagatggctttaccctcatggacaatggtcgcagc
tgcagtgcttgcagcaactctgcaacagatgtggtgttcctgattgacggctctaagagc
gttcgtcctgagaactttgagctggtgaagaagtggatcaaccagatcatcgacaaactg
gatgtgtctgacagcaaggcccatgttggactggtgcagtactccagcgcagtcaaacag
gagtttcccctgggtcgctacaacaacaagaaggacctgaaggatgctgtgaagaagatg
gcctacatggagagggggaccatgacaggtcaggccctccgctatctggtcgataacagc
ttcaacccaggtcacggtgcccggcccggtgtcgccaaggtgggcatcgtgttcactgac
ggacgcagccaggacttcatcggagaagccgccaagaaggccaaggaaaacggcttcaag
atgtatgctgtgggagtgggcaatgcagtggaggatgagttgagagagatttcatctgag
ccgactgcagagcactacttctacaccgctgacttcaaggccatgacccagattgccaag
aaactgcagattaacatctgccaagaggacgacccttgcgaatgcgactccctcgtaaag
ttccaaaagaaagtagaagatgctctacaggcactaacaaaaaaattagagagcatgtcg
aagaggatcgccatgctggagaacaaaatcgtctga
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