Hippoglossus stenolepis (Pacific halibut): 118124916
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Entry
118124916 CDS
T08308
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118124916 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118124916 (arid1ab)
03021 Transcription machinery [BR:
hsp03021
]
118124916 (arid1ab)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118124916 (arid1ab)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
ARID
118124916 (arid1ab)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118124916 (arid1ab)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118124916 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118124916
NCBI-ProteinID:
XP_035039013
LinkDB
All DBs
Position
17:complement(18612588..18681665)
Genome browser
AA seq
2331 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNVGGGGDSDMKNGNGNLPRVNNNSSNQNDTGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSFQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNVGNQQPTSTPTLNQLLTSPSS
TRSYPNYPQGDYNNQEGANKGPGELGSSQYGGVHPGWQPRTHHQPPMSPGNTGQPPSRNQ
PPSPMDQVGKMRGQPYGGPNPYSQQQQGPPTGPGPQQGGSYPGQAYGPPGPQRYPMGMQS
RTPGTMAGMQYGQQMSTYGQQGPAGYGQQSQGYYGQHGPPTHPGQQQPTYPVQPQGSSGP
TYPQQGHPSQSPGQHGQTGPPYQQSQGPHGPPPGQPPYSQPSQSQPGQPPYVPPQQQQSQ
QPPQQQQGPGPQSQQGPQGQPGYPQPPGPGQPPPQQTPQQQQQQQQQGPPQQQQQQQQPQ
PQPGGQPPQAQQPSGHQQGQASPYSQTPPQQQQQQQQQQQQQQQQQQQQQQQQQQQREQQ
QQREQQQQREQREQREQQSSYQRFPPPPQELSQDSFSSQSSAPPSNQPMASSKSSQEDSM
QGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGI
RGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSILHSSMNQSAMGQDRVY
MRNPQMPPYGSPGQPGSALSPRQSSGGQMHSGMGPYPQNNSMGNYGPQGGQYGPQGYPRQ
PGYTAMPNANYPSGPGMGGSMNPMPGQASGTPYGNMPPGRIGPGQMGARPYGPVMASNMA
GMPPQVASGMCPPPGMNRKDGGPSMHHGPTNSIHNRPPGYPNMSQGMMGSGSPYGPGMNS
MHGMMNQGGPGPYPMGANVANNTPGMAPTPEFGMDKMIPAPKINNKVEGTPKPETKKKSS
SSTITNEKITRLYELGPEPERKMWVDRFLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSVK
EIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFN
ADTKKNQAKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHTQMPPMPGVR
SSVNLQDPFADGGDPAFSRRNALTPNSQGYQPAMGGPEMMGRMGPYESTKDPFGGMRKAG
EQFMSPGPNSGMAEQYNRGPPGPMGNMQMGQRQQYPYGYDRRQEPGMGPDGSMGPGAPQP
NMMPSGADTGMYSPSRPPPQQRHESYPNQYPGQGAPPGGPYPNQQPGMYPQQQPNYKRPV
DGGYGPPAKRHEGEMYSVPYSGQQQPGPQPSGPQGQQDMYNQYNAYPGGERRPPGPQGQF
PFPFGRDRGPSSAGPNSQSPMPPQMMASPMPSGPDGPQGPMWQGRTEIGYQNYPNRQGPP
VPGQGPGYHGMNRSEEMMPSDQRMNHEGQWPGHVNQRQPPFGPGGSGPPMTRPLPSTYQT
SQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQPMIRR
DVAFPPGSIEASQPHLKPRRRLTIKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYD
DNSISTFNLCSLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPNAAEDSDDDI
LMPEGEDMDTDEEDEDDEEVKESKANPDTSSPIQVKQEEDSSQKDKSSEDEDEEKERKPS
IKEPSTSTSGSSVDPNLHSEKPKQASKFDKLPIKVVRKKNPFLLNHSSKLGQRQSFDSGL
IHWSIGGGDTTEHIQTHFESRMELLKQRKRLQTAAESRKKVQLLEMATENPEKSKSNEED
KPRAQPTQSSEPQKSLAEKTTPPLPISAPVTATIDDVLSARPGSVTEEVVRGGAEEQKEN
GKYLFSINPDFQSRRNVKILEDEPHSKDETPLSTLSDWQDSLARRCICISNIVRSLSFVP
GNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGVSCERDEWWWDCLEV
LRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTLGPHGSLSPQ
RLVLETLSKLSIQDNNVDLILATPPFSRMEKLYGSLVRLVGERKVAVCREMAVVLLANLA
QGDSMAARAIAVQKASVGNLLGFLEDSLAATQYQQSQSSLLQMQGGPQFEPTSVDMMRRA
ARALHALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6996 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgccactctcaacaccagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccgggagagaagcagcatgaaaataag
gagccgggacctgacggcggatctcccggtcagaaggaactgcaggacgggaccgatgct
ggaaatgttgggggaggaggggattctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataatagcagtaatcagaatgataccggcgggcccgaagggaataaccatccc
gggatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggataccccaac
cattataacaactacagcccgttccagaacaggacttcttttcagggccaaggatacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcaa
cagccagcaggaggaaccacagctatggctgcctcgtacaataatcagaggtataacgtg
ggaaaccaacaacctacgtctacgccaactttaaatcagcttttgacatccccgagctcc
accaggagctacccgaactacccccaaggagactataacaatcaggaaggggccaacaag
ggaccaggagaactgggcagcagtcagtatggtggtgtccatccgggttggcaaccaagg
acccaccaccagcctcccatgagcccgggaaacactggacaacctcccagcaggaaccag
cctccaagcccaatggaccaggtagggaagatgcgtggccagccatatggaggacccaac
ccctactcccagcagcagcaagggcctcccacagggcctggaccccaacagggaggctca
tacccaggccaggcctatggacctcctgggcctcagagatatccaatgggcatgcagagc
cgaacacccggcactatggctggcatgcagtacggacagcagatgtcaacctatggacag
cagggccccgcaggctatggccaacagagccagggatactatggtcagcacggcccccca
actcaccctggccagcaacagcctacttatcctgttcaaccacagggaagctcgggacct
acctaccctcagcagggccacccttcacagtctcctggccaacatgggcagacaggaccc
ccttaccaacaatcgcaaggtccccacggccctcccccaggacagcctccgtatagccag
ccctcacagtctcagccgggacagccaccttacgtccctccccagcagcagcagtcgcag
cagccgcctcaacagcagcaaggtcctggtccccaaagtcagcagggccctcagggccag
cctggctacccacaacccccaggaccagggcagccaccaccgcagcaaaccccacaacaa
cagcaacagcagcaacaacaagggcccccacaacaacaacaacaacaacaacaaccacag
ccacagccaggaggtcagcctcctcaagcccagcaaccttcaggtcatcaacagggtcaa
gcatcaccttactctcagacaccgccacagcagcagcagcagcaacagcagcagcagcag
caacaacaacaacaacaacaacagcagcaacaacaacagcaacagcagcgagagcagcaa
cagcagcgagagcagcaacagcagcgagagcagcgagagcagcgagagcaacagtcatca
tatcagaggtttccacctcctccacaggaactctcccaggattcatttagctcccagtcc
agtgctcctccttccaaccagcccatggcctccagcaagagcagtcaagaggacagcatg
cagggtcggccatccagtctgccggatctgtcggggtccatcgacgacctgcccactggt
acagagggggccctgagcccaggggtcagcacttcaggggtgtccagcagtcagggcgag
cagagcaaccccgcccagtcgcctttctctccacacacttcgccccacctgccaggcata
cgtgggccctctccctcgcctgtgggttcccctgccagcgtcaccccctctcgcactggt
cctctgtctccagctgctgtgccaggtaatcagatgcctcctcggccgcccagcgtccag
tcggacagcatcttgcactcttccatgaaccagtcagccatgggccaggacagggtgtac
atgcgtaaccctcagatgcccccatacgggtcccctggacaacctggctccgccttatct
ccacgtcagtcttcaggaggccagatgcatagtgggatgggaccctacccccagaacaac
tccatgggaaactacgggcctcaggggggacagtacggcccacaaggttaccctagacag
cccggctacacggcgatgcccaacgccaactaccccagtggccctggaatgggtggctcc
atgaaccccatgcctggtcaggcaagcgggactccttatggaaacatgccgcccggtaga
ataggcccgggccagatgggtgctcggccctacggtcctgtaatggcctctaacatggca
ggcatgcctcctcaggtggcttccgggatgtgtcccccaccaggcatgaacaggaaggat
ggcggcccctccatgcaccatgggcccactaattccatacacaacaggcctcctggctac
ccaaacatgtcccagggcatgatgggatcaggctctccatatggccctggcatgaacagc
atgcacggtatgatgaaccagggagggccagggccttacccaatgggagcaaacgtggcc
aacaacacccctggaatggctcccactccggagtttggcatggataaaatgatccctgct
ccgaagataaacaacaaagtggaagggactcccaagcctgaaaccaaaaagaagtcaagc
tcgtccaccatcaccaacgaaaagataactcgtctgtatgagctcggcccggagccagag
aggaagatgtgggtggacagattcctggccttcgctgaggagaaggccatgggcatgaac
aacctgcccgctgtgggacgcaagcctctcgacctcttcagactctacgtgtccgtcaag
gagattgggggcctcactcaggtgaacaagaacaagaagtggagggagctggccaccaac
ctgaacgtaggcacgtcgagcagcgcagccagctcgctcaagaaacagtacatccagtgt
ttgtacgcctttgagtgcaagattgagcgaggcgaggacccgcccccagacatcttcaac
gcagacaccaaaaagaaccaggcaaagatccagcctcccagcccagctggttctggatcc
ctgcaagggccccaaacgcctcagtccaccagtagttcgatggccgaggggggagacctg
aagccccccactccggcttccactccacacacacaaatgcctccaatgcctggcgtcagg
agtagcgtgaatttgcaagacccttttgctgatggtggcgacccagcattttccagaaga
aacgctctgactcccaactctcagggttaccagcctgcgatgggcggcccagagatgatg
gggcggatgggtccctacgagtccaccaaggacccctttggtggcatgaggaaagctgga
gagcagttcatgtcgccaggacccaacagtgggatggcagagcagtataacagaggccca
ccaggccccatgggcaacatgcagatgggccagaggcaacagtacccatacggatatgac
cgaagacaggagccaggcatgggccctgatggcagcatgggaccaggagctcctcagccc
aacatgatgccttctggagccgacacagggatgtactcacccagccgccctccaccacag
caacggcatgagtcctatcccaatcagtaccctggccaaggagctccccctggtggccca
tacccaaatcaacagccaggaatgtatcctcagcagcaaccgaactacaagcgtcctgtc
gatggagggtatggacctcctgccaagcgacatgagggtgaaatgtacagtgtcccctac
agtggtcagcagcagccaggtccacagccatcggggccccagggccaacaggacatgtat
aaccagtataatgcgtatcctggaggtgaacgaagaccaccgggcccacagggccagttc
ccctttccctttggtcgggacagaggaccgtcatctgcaggccccaactcccagtctcca
atgcctccccagatgatggcgagccccatgccttcaggtcccgatggcccccaaggacca
atgtggcagggtcgcactgagatcggctaccagaactatcccaaccgacagggacctcct
gtacccggccagggccccggctaccatggcatgaaccgctcagaggagatgatgccatca
gaccaacgcatgaaccacgagggccagtggccgggtcacgtcaaccagcggcagccacca
tttggccctggtggttctggaccgcccatgaccagacccctgccatccacctaccagact
tcccagaaccacattcctcaggtgtcaagtccagcgcccatgccccggccaatggaaagc
aggacgtcacccagcaagtccccctacatgcatccgggcattaaggtgcagaaagccgga
cctccagtacctgcctcccacattggccaggcccccgtgcagcaacccatgatcaggcga
gacgtggccttccctccaggctctattgaggcctcacaacctcaccttaaaccccgcagg
cggctcaccataaaagacataggcactcctgaggcttggagagtgatgatgtcactaaag
tcaggcttactagctgaaagcacatgggccttggacaccattaacattctgttgtatgat
gacaacagcatttctacatttaacttgtgctcgcttcctggattcctcgagttggtggtt
gagtactttagacgctgcctcatcgagatcttcggcatcttaaaggagtacgaagtaggg
gaccccggccagcgcaccctcatagaccccaatgctgcggaggactctgatgatgacatc
ctcatgccagagggtgaggacatggacacggatgaagaagacgaagacgatgaggaggta
aaggaatcaaaggccaaccctgacacctcctcaccaatccaggtgaaacaggaggaggac
agctcccagaaagacaagtcttcagaggacgaggacgaggagaaggaaaggaagccttct
atcaaggaacccagtacctctacctcagggtcctccgtggaccccaacctccactcggaa
aagcccaagcaggctagcaagtttgataaactccccatcaaggtcgtgcggaagaagaat
cccttcctgctgaaccactcatccaagcttgggcagcggcagagctttgacagcggcttg
atacactggagcattggtgggggggacactaccgaacacatccagacccacttcgagagt
aggatggaactcctcaagcaacggaaacgcttgcaaacggccgctgagagccgtaagaag
gtccagcttctagagatggcaacagaaaatcctgagaaatccaaatccaatgaggaggat
aaacctcgggcgcagccaacccagtcgtctgaacctcagaagtctctagcagagaagacc
actcctccacttccaatcagcgcaccagtcactgccaccattgatgacgtactatctgcc
cgtccagggtcagtcacagaggaagtggttcgtggaggcgcagaggagcagaaggaaaac
ggcaagtacttgttcagcatcaaccctgacttccagagccgccgcaacgtgaagatcctg
gaggacgagcctcacagtaaagatgagacgccactcagcactctgtcggactggcaggac
tcgctagctcggcgctgcatctgcatctccaacatagtgcgcagtctctccttcgtccca
ggtaatgatttggagatgtcgaaacacccaggcctcctgctgctgcttggccgcctggtg
ctgctccaccacaggcacccagaacgcaaacaagcaccggtcacctacgagaaggaggag
gaggaagatgagggcgtgagctgcgagagggacgagtggtggtgggactgcctcgaggtc
ttaagggagaactgtttggtcactcttgcaaacatctcaggccagctagacctttctatc
tacccagagagtatatgcctgccactgctggatggcctgctccattgggctgtctgcccc
tcagcggaggccctggaccctttccccacgctggggccccatggctcactttccccccag
agactggttcttgagaccctcagcaagctcagcatccaggacaacaacgttgacctcatt
ctcgcaacaccgccgttcagtcgcatggagaaactctacggctcactggtgcgtctagtc
ggtgagcgcaaggtggccgtctgccgggaaatggcggtcgtcctgttggcgaatctcgcc
cagggtgacagcatggcggctcgggctattgctgtgcagaaagccagcgtaggtaacctg
ctgggcttcttggaggacagcctagctgccacacagtaccagcagagccagagctccttg
ctacaaatgcagggcgggccccagtttgagcccacgagcgttgacatgatgcggcgggcg
gcccgagccctgcacgctttggcgaaggtagaagaaaaccactctgagttcactttgtac
gagtcgcggctactggacatctcagtgtccccacttatgaactctctggtgtcccaagtg
atctgtgacgtactatttctgattggccagtcatga
DBGET
integrated database retrieval system
