Hippoglossus stenolepis (Pacific halibut): 118124927
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Entry
118124927 CDS
T08308
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118124927 (toporsa)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118124927 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118124927 (toporsa)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118124927 (toporsa)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118124927 (toporsa)
UBL E3 ligases
118124927 (toporsa)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
118124927 (toporsa)
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118124927 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
PWI_Topors
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118124927
NCBI-ProteinID:
XP_035039034
LinkDB
All DBs
Position
2:19634363..19639025
Genome browser
AA seq
809 aa
AA seq
DB search
MSAIKIALQQSQKSSRRKTSEAMSADVSPDSKCPICLDMFNNISYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHTIKSEQDFKKYDLQPVNNGSFGSFGGVRFRYRTTLTGVHR
SMSGRTSPPPDNGVMFEASTIPPQQPQDRYVRRMMMRLAAKRKAASEGRAVNSVREQEMV
NFRRELYRQGVRVRTVRDGGRSRDTSAEFYRTNPACLHRLIPWVKRELSVLYGSHGSLVN
IVQHIIMSRITRFDMEDGAIQEELRPFIQGRTEHFLHEFINFAKSPFHLEAYDQHAVYDC
PAASSNEDSSSNSSVIAISEDEELTMDLDPPGETLSTLRDSVWDDETPGPSYSTTAEQSR
AEHLSVIDSDSDTSLEEETREFDASPLQMHPHNKTDMTRGEVNKQGGLSPDDCVIVGFVK
PTVERTPELVQLSSDSDEFDCEDTEEVPRLPQHIRFSSASPPASQSCDPRGAGQSENVEM
DHSHQFDSKVICSSPTSSRHKTSRKSDRKDRDGGSDGNERSRERHCSKDRDQRRRRRSSS
RERRHNSGRLVISQSSVNTLSRGRDYPYNSGRDSKLDCSSKRRDNYQSDQSYRHYGQERN
DSGTHYTERRSYYYSSHKYSDRYTYSRSRSHSRDSVRRDRRHSRSFSSSRSPSAKSKSHH
DKPGGKRKYKTRHLEEPSKNTLSNSGCEGDASAPLTKHKKKSKEKHRKKSKERSRKTSRS
LSVELINEDHAHERSKRHHKKKKKHKKKSKKHRSDERTEKRSPTIITIDSDSDSFANDVG
TQACSTNKDNAIDSITDDPVDPTALTSLS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatcaagattgccctgcagcagagccagaagagtagcaggaggaaaacctct
gaagccatgtcagcagatgtgtcgccagactccaagtgtcccatctgcttggacatgttt
aacaacatttcgtacctggacctctgcctgcacaaattctgtttccgttgtattcatgag
tggtccaagaacaaagcagagtgccctttatgcaaacagccgtttaattcaatctatcac
actataaaatcagagcaagactttaaaaagtatgacttgcagccagtgaacaatggctcc
tttggttcttttgggggggtgcggtttagataccgcacaactctcactggagtccaccga
tcgatgagtggaaggacctcgccacctccagacaatggagtaatgttcgaagcctcaaca
atccctccccaacaacctcaggaccgttacgtccgacgcatgatgatgaggctggcggcc
aagcgtaaagctgcgagtgaaggtagagcagtgaacagcgtccgagaacaggaaatggtt
aacttcaggagggagctgtatcggcaaggagttagggtccggactgttcgggatggcggc
cgctcgcgagacacctcagctgagttctacagaacaaatcctgcctgcctacatagactg
atcccctgggtaaagagagaactcagtgtgctgtatgggtcccacggttctttggtaaac
atagttcagcacatcatcatgtcacgcattacacgtttcgacatggaagatggagctatt
caggaagagctcaggccattcatccaggggcgcacagagcactttctgcatgagttcatc
aactttgcaaaatcccccttccatttggaggcatatgaccagcatgctgtgtacgactgc
ccagccgcttcctcgaatgaagacagcagctccaactcatctgtgatagcaatttcagag
gacgaggaactcacaatggatttggatcccccgggagaaaccctgtctactctgagggac
tctgtgtgggatgatgagactcctggaccttcatattctacgacagcagagcagagccgg
gcagagcatctgtcagtcatcgactcagactctgacaccagcttagaggaggagacacga
gagtttgatgcttctccactgcaaatgcacccccataacaaaacagacatgactcggggt
gaagttaacaaacaagggggtttgtctcctgacgactgtgtcatcgtaggctttgtcaag
cccacagtagagaggactcctgagctggttcagctctcctcagactctgatgagtttgac
tgtgaagatacagaggaagtgcctcgtttacctcaacacatccgcttctccagtgccagt
cctcctgcttcgcagagctgtgatccaagaggtgctggacagtcagagaatgtagaaatg
gaccacagtcatcagtttgattcaaaagtaatatgtagctcgccgacatctagcagacac
aagacatccaggaagtcagacagaaaagatagagatggaggttctgatggtaatgagagg
tccagggagcgacactgttcaaaggacagagaccagaggagaagaaggaggtcaagtagt
agagagcgcaggcacaacagcgggaggctggtgatctcccagagcagcgtcaacacgctc
tccaggggaagagattatccctacaacagcggcagagactcaaaattggactgtagttct
aaaaggagagacaattatcagagcgatcagtcttatagacattatggccaggagagaaat
gacagtgggacgcattatacagagaggcggtcttactattacagtagtcacaaatactca
gataggtacacatactctcgctccaggagccacagcagagactcagtgagacgggatagg
aggcattcaagatctttttccagcagtcgctctccttcagcaaaaagtaaatcccaccat
gacaagcctggtggaaagagaaagtacaaaacaagacatttggaggagccatctaaaaac
acgctttccaactctggctgtgaaggagacgcctccgcaccattaacaaaacacaagaaa
aagagcaaagagaagcatcggaaaaaatccaaagagaggtcgagaaagacgagcaggagc
ttgagtgttgagctcatcaatgaggatcacgcacacgagcgaagcaaacggcatcacaaa
aaaaagaagaaacacaagaaaaaaagcaaaaagcacaggagtgatgagcgcacggagaag
cgatcgcccaccatcatcaccattgacagtgacagtgattcttttgctaatgacgttggt
acccaggcctgcagcactaataaagacaatgctattgacagtatcacagatgacccagtt
gaccccaccgctctgacctctctgtcataa
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