Hippoglossus stenolepis (Pacific halibut): 118124967
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Entry
118124967 CDS
T08308
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118124967 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118124967 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
hsp04031
]
118124967 (rhot1b)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
118124967 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
118124967 (rhot1b)
GTP-binding proteins [BR:
hsp04031
]
Small (monomeric) G-proteins
Rho Family
Miro
118124967 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
PduV-EutP
EF-hand_6
RsgA_GTPase
EF-hand_7
Arf
Dynamin_N
EF-hand_1
MMR_HSR1
AAA_22
Septin
AAA
Motif
Other DBs
NCBI-GeneID:
118124967
NCBI-ProteinID:
XP_035039114
LinkDB
All DBs
Position
2:complement(14480653..14493764)
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AA seq
660 aa
AA seq
DB search
MRKDVRILLVGESKVGKTSLIMSLVSEEFPHVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLFQEISKANVICIVYSVNNKKSIEKVTSHWIPLILENTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEKKD
MKLLCVKALTRIFKVSDLDNDGILNDIELNFFQRTCFNTPLEPQALEDVKNVVRKNLSDG
VCDNGLSLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELNQDYLFPPLKVPIDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPDELRDLFEVFPYMPWGADVSNTVCTNDNGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIVAEQESQASGITVTRDKKIDLQKKQTQRGVFR
CNVFGDIGSGKSGFLQAFLGRNLTRQKTIREEHRSYYAISTTYVYGQEKYLLLHEVFPDF
DYLSDADMACDIVCLVYDVSNPYSFEYCAKVFKQYFMDSKTPCMMIATKSDLPEIKQMYG
CTPLEFCRKHKMPPPQSFTCSTAAAPNKDIYTKLTTMAMYPHARLRCMCTCNRCTFCLCH
NFLNSELLQTVRAKLYAVVLRRHVTQADLKSSTFWLRASVGATVFALLGLTMYRVLLKSR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagacgtgaggatcttattggtgggagagtccaaggtggggaagacgtctctc
atcatgtccctggtcagcgaggagttcccacatgtggtgccctaccgagctgaggaaatc
accatacctgcagatgtcacaccagagagagttcccacgcacatcgtggactattcagag
gcagagcagactgacgagcagctgtttcaggagatctctaaggcaaatgtcatttgcatt
gtctactctgtcaacaacaagaagtccatagaaaaggtgaccagccactggatccctctc
attcttgagaacacggacaaggacagcagggttcctctgatcctggtggggaacaagtcg
gacctggtggaacacagcagcatggagaccatactgcccataatgaaccagtacagtgag
atagagacttgtgttgagtgttctgcaaaaaacctgaagaacatctcagagctgttctac
tacgcccaaaaagccgttctgcaccccaccggccccctctactgtccggagaagaaagac
atgaagctgctttgtgtgaaagctctgacccgaatcttcaaagtgtcggatctcgacaat
gatgggattcttaatgatattgagctcaacttcttccagcggacatgtttcaacacccca
ctcgagcctcaggcgttagaggatgtaaaaaatgtagtgaggaagaatttaagcgatgga
gtttgtgataacggactcagtctgaaaggcttcctgttcctgcacaccctgttcattcag
cgaggtcgtcatgaaacaacctggacggtgctgaggaggttcggatatgacgatgacctg
gagttaaatcaggactacctcttcccaccgttgaaagttcctatagactgcaccacagag
ctcaaccacaatgcctacctcttcctccagagcgtctttgacaaacatgataaggaccga
gactgtgccttgtcaccagatgagctgagggacctgtttgaggtttttccctacatgccc
tggggtgctgatgtcagcaacacagtttgcactaatgacaacggctggatcacctaccag
ggatatctctcccagtggacgctgacgacatatctggacgtccagcgatgcctggagtat
ttgggttatcttggttactctattgttgctgagcaggagtcgcaggcatcagggattaca
gtgaccagagataagaagattgacctgcagaagaagcagacccagcgcggcgtcttccgc
tgtaacgtcttcggagacattggcagcggcaagagcggtttcctccaggctttcctgggt
agaaacctcacgcgccaaaagaccattcgagaggaacacagatcctactacgccatcagc
acaacatatgtttacggtcaggagaaataccttctgcttcatgaagtgttccctgacttc
gactatttgtccgacgctgatatggcctgtgacatagtctgcctggtgtatgatgtcagt
aacccttactccttcgaatactgcgccaaagtcttcaagcaatacttcatggacagtaag
actccgtgtatgatgattgcaaccaagtctgacctgcctgagatcaaacagatgtatggc
tgcactcccctggagttctgcaggaagcacaagatgccgcctccccagtccttcacctgc
agcacagcagcagcacccaacaaagacatctacaccaaactaaccaccatggccatgtac
ccccacgcccggctgcgctgcatgtgcacttgtaaccggtgcaccttctgcctgtgtcac
aacttcctcaactctgagctgctccagacggtcagggccaagctctacgctgtcgtactt
agaagacatgtcactcaagcagacctgaagagctccaccttctggctccgggcgagcgtc
ggggccacggtgtttgcgttgctgggcttaaccatgtacagagtgctgctcaaatcacga
tga
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