Hippoglossus stenolepis (Pacific halibut): 118124996
Help
Entry
118124996 CDS
T08308
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
hsp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118124996 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118124996 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118124996 (nup153)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118124996 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
118124996
NCBI-ProteinID:
XP_035039188
LinkDB
All DBs
Position
17:complement(10181410..10196969)
Genome browser
AA seq
1515 aa
AA seq
DB search
MTAIRRRNAERRSNDRAMAATGGGKIRSRRYHIASKPYAKSKQQQSGIISRVTDTVKSIV
PSWLQKYFKNEDATEEGAAVPETDQNCQPPPPPPPNGSEEGPPRLDGRDSPEPSTSYTEP
STSRASLNFQEYVLSRPPLSRSHLHFAPLDASSPTLGASSNLFSQPSTSSAPGPFSTGFS
LVKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTNSGPQPSQS
SLKRPAFNLSVFGTSSNSTLNSTALNSSQLGYSPFYPGKTMYGGAAAVRSSRTRPGTPYQ
APVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAAASSPLSPSMDGTN
LDASHFQSKKKRMDSNLPPVQKMVVPAAASVSGNRSVSFRPTLTPGGVGRNVDRTPRETP
TRQSPQLPRATPGLSQSTIGSSGPAYPLSSTPAASSGGSGGGKMKRERTTTRASTKRPEE
DEMVEMPDLPAISLPISAATLPTFSFSPLSAPTTSTASNVTAVTPAKETFANKEPPTAST
PPFVPFTFSSPIVKATASSPPTFSPSAGFTFSAPVAKLGSSITNGKLATPIAAAVKSAPN
KSTDDFEGPFKPAKVLKQGSVLDLLKAPGFASPVAQPSSGSDTSPQQTSKQSTAPSSSST
TTTPLSSSTGFGDINPLNWTCEVCWVPNKPSDAKCVCCSTPQPKSSSKSMDSKPSPTTSV
GMDSSTNATSTTTTTTGFGTMFSTPAGTWDCDTCLVRNKPDAVKCVACETAKPGTGLKPS
LTLPSAFSAVKTVSTPTAHVSTGFIGIGDKFKKPEGAWECGTCLVENKAEDTKCVACTNA
KPGASAGASVDSSSASTAPVFGFGDKFKKPEGAWECEACLVQNKAADVQCVACQTVKPGA
KVEFKAFGSTAAGSSTFGSSNSGGIKFGTSDSTSGSGSGGFKFGTSDSTEGSGSGGFKFG
GVLSESSSGGFKFGISSSESTSNDATASSGFKFGSSGEGFKFGAASSDDKKSEEPSTGSG
FKFGASDGIVFGTGSSSTESNTTKGGFSFGLSKPEEKTSDTTTSSSVTFTAPVSSQGNSD
SAASSNDTTSATTTTTAGSVFGRLGERSLATTPQGGSTFGSLPTDKEPAAPTFTFGKPEE
KKEGAAQSTFLFDAASKEADATPAPANSGGFSFSKASAPTEQPPPTFAFGKPADKSETSA
AEAPKPSFTFGQSATGSSFVNDSAASPKPAFSFMASNPTNTTSSTTSSSSTPIPSLFGNS
NSSTQAAAPSTFMFSQPPATASDGPPAKAFLFGQNQDSQPPAPSAAPLNSVPAPTPSQTF
IFGAPNAAPPAAAAPSFGFGTAAPSAASSSGPSGAPPPYVFSSAPAGGFGANQTPSFGSS
FGTSFSSTPSQAPAFGAKTEAAPVFGQQVNSTPVFGAATNSAPGGGFQFGGASAFGATNN
TSGVFTFGVGSAASPAPPAASPSIAPQSAPPGGGFNFNSQPPGFNIGAAKTFTASPGGQQ
AIAGRKIKTAVRRRK
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacgccgagagacgctcaaacgacagagccatggcggcc
acgggtggagggaaaattagaagcaggagataccacatcgcctccaaaccttacgccaag
agcaaacagcagcagtcaggcatcatcagtcgggtgacagacacagtaaagagcatcgtt
ccttcctggctgcagaaatacttcaagaatgaagatgctactgaagaaggggctgctgta
ccagagacagaccagaactgccagccgccgcctcctcctcctccaaatggcagcgaagag
ggacctcctcgtcttgatggacgtgactccccagaacctagcactagttacacagagccc
tcaaccagtcgggcatccctgaattttcaggagtatgtcctttctcggccccctctgagt
cgctcccaccttcattttgccccactggatgcctcctctccaacattgggggcttccagc
aacctcttctcccagccctccacctcctcagcccctggacccttttcaacaggcttctcc
ttggtgaaagaaatcaaggacaacctctcacagcacgaagatgataacatctccaccacg
agtgggttctcctcccgcgcctctgacaaagatgtccccacttcaaaaacggcatcactt
ccccagctttggtccccagagatggacagaacaaactctgggcctcagccttcccagtcc
agtctgaaaaggcctgcattcaacctatccgtttttggaacgtcttccaattcgacatta
aacagcacagcactgaactccagccaacttggatattcacccttctaccctgggaagacc
atgtatggtggggcagcggcggtcaggagctctcgcacgcgtcctggaacaccataccag
gccccagtgaggagacagatcaaggccaagcctgctggagctcagccctgtggggtgacg
agtgccacagccagacgcatcctgcagtcattggagcgcatgtcaagccctctggctgat
gccaagagaatcccagcagcagcctcatcccccctgtcaccatctatggatggcacaaac
ctagatgcttcacatttccagtcaaaaaagaaacggatggattctaacctcccaccggtg
cagaagatggtggttcctgctgcagcctcagtgtcaggaaaccgctctgtgtccttcagg
cctactttaactcctggaggagtaggacgaaatgtggacaggaccccaagagagacgccc
acaagacaatcacctcaactacctagggcaaccccaggtctatctcaaagcacaattggc
tccagtggccccgcctatcctctgtccagcacgcctgcagccagcagcggtggctctgga
gggggcaagatgaagagagagaggaccactacgcgagcctccacaaaacgccccgaggag
gatgagatggttgagatgccagaccttccggccatttcacttcccatcagcgccgccacc
ttacccaccttcagcttctcccctctttctgctcccaccacctccactgcctccaacgtc
actgctgtcactcctgctaaggaaacatttgcaaataaggaacctccaacggcctccaca
cccccctttgtacctttcacattttcctccccaattgttaaagcaactgcttctagccca
cctaccttttccccttcagctggatttacctttagtgcacctgtagcaaagttaggttcc
tccataactaacgggaagctggccacgcccatagcagcagcggtgaagtcagcacctaac
aaaagcacagacgattttgaaggaccctttaaacccgccaaggtcctgaagcagggcagc
gtgctggatcttctcaaagctcctggttttgcctctcctgttgctcagccttcctcaggc
tcagacacttctccccagcagacctccaaacaatccactgccccctcttcctcctccaca
accaccacccccctctcttcatcaacagggtttggtgatatcaacccgcttaactggacc
tgtgaagtctgctgggtgccgaacaagccatcagatgcaaagtgtgtttgctgtagtacc
ccacagcccaaatcctcatcaaaatctatggacagtaagccttcacccacgacctcagtt
gggatggatagcagcacgaatgccacctccaccactacgaccaccacaggttttggcaca
atgttttccacacctgcgggaacctgggactgtgacacgtgtcttgttcgtaacaaacct
gatgccgtaaagtgtgtggcctgcgaaacggccaaacctgggacaggacttaaaccctca
ctgactcttccctctgccttctcagctgttaagactgtatccacccccacagcccatgtt
tccacagggttcattggaattggagacaagtttaaaaaaccagagggtgcatgggaatgt
ggtacgtgtttggtagagaacaaggcggaggacacaaagtgtgtggcttgcacaaacgcc
aaaccaggagcatcagcaggagcttcagtcgattcatcttcagccagcactgctccagtg
tttgggtttggagataaattcaagaaaccagagggtgcctgggagtgtgaagcctgtctt
gtacaaaataaggctgctgatgtgcagtgtgttgcttgtcaaacagttaaacctggagct
aaggtggagttcaaagcttttggttcaaccgctgctggctcctccacatttggctcttct
aattctggaggtatcaagtttggcacatctgacagtacctcaggctctggatctggaggc
tttaagttcggcacatctgacagtaccgaagggtctggatctggaggtttcaagtttgga
ggcgtattgtcagaatcatcatcaggtggattcaaatttggaatctcctcatcagaatcc
acttctaacgatgctactgcctcatcagggttcaaattcggcagctcaggtgagggcttt
aaatttggagctgcctctagtgatgacaaaaagtcagaagagcctagcacaggttctggg
tttaagttcggagccagtgatgggatagtttttggaactggatcatcaagtacagaaagc
aacactactaagggtggcttctcttttggactgtcgaaacctgaagagaaaacatcggac
accaccacatcatcctctgttactttcacagcacctgtttcttctcaaggaaacagcgac
agtgctgcatcatcaaatgacacaacatcagcaaccacaaccaccaccgctggatctgtt
tttgggagactgggagagcgaagtttggcgaccacaccacaaggtggctcaacgtttggc
tccttaccgacggacaaagagccggctgctcccacgtttaccttcgggaagccggaggaa
aagaaggaaggcgctgctcagtccaccttcctctttgatgctgctagtaaggaggcagat
gctacaccagcaccggccaattcagggggcttttccttcagcaaggccagtgctccaaca
gaacaacctccacccacgttcgcctttggcaagccagccgacaagagtgaaacatctgct
gcagaggccccaaagccctccttcacctttggacaaagtgctacaggtagttcatttgtg
aatgattctgctgcttctccaaaaccagcattttcctttatggctagtaatcccaccaac
accactagctccaccacctcgtcatcctcgaccccgatccccagtctgtttggcaacagt
aacagctccacgcaggctgcagctcccagcactttcatgttcagtcagccccctgcaacc
gccagtgacggtcctccagctaaagcctttctttttggacagaaccaggacagccagccg
cctgctccatcagcagctcctctgaactctgtcccagccccaactccctctcagaccttc
atctttggtgctcccaacgctgctccccctgctgctgctgctccatccttcggctttgga
acagcagctccctctgctgcctcatcttcaggtccgtctggagctccccctccgtatgta
ttcagctcagctccagctggaggctttggggccaatcagacgccgtcatttggctcatct
ttcgggacctctttctcatccacgccctcacaggcccccgcctttggggccaagacagaa
gcagcccctgtctttggacagcaggttaactccacacctgtatttggggcagctacaaat
tctgcaccaggtggaggctttcagtttggaggagccagtgcattcggagccacaaacaac
acctcgggtgtgtttacttttggagtaggttccgctgcttctcccgctcctcccgctgcc
agcccctccatcgcaccccagtcagcaccacctggaggtggattcaacttcaactcccaa
cccccaggattcaacattggggcagctaaaaccttcaccgcttctcctggtggacagcaa
gcgatcgcagggcgcaagatcaagacggcggtgcggcgcagaaagtaa
DBGET
integrated database retrieval system
