Hippoglossus stenolepis (Pacific halibut): 118125001
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Entry
118125001 CDS
T08308
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118125001 (ctnnd1)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
HEAT_EZ
Atx10homo_assoc
Adaptin_N
KAP
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
118125001
NCBI-ProteinID:
XP_035039203
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All DBs
Position
2:5344338..5375012
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AA seq
959 aa
AA seq
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MCSFCVACVETRSLLFQPLSLGVVCQVEQGDTGLAAVVVEQQRGTRARTCCNGRIPCNAD
IERLTLNEGYINGTHHFRMEPGQVMQETYTVEEEPQESQPVVSVTSEDGTTRRTETTVKK
VVKTTTTRTVIPSVSDTLSLDGGGSVTGMGGYTTPMDRVYRPPPSGGMPMDYPTHTVPRN
YHYGPPGGYDDYRSGPPSETYASLSRGAHMDDRYRPVHPDGYRTLDPSYRATSRNQLDPY
AAQPQVGRMGSAMELSSLPRFVPEPYGLEDDQRSMGYDEPDYGMGHPMHYSTVPRNPHVF
PHGPPRRAGSYEGTLDGDMSGPGDMYYWGGGAPLAQGERGSMASLDSTLRKGPGPSGWRQ
PELPEVIAMLNYRLDPVKSNAAAYLQHLTYKNDKVKTDVRRMKGIPALVSMLDNPNKDVH
YAACGALKNISYGKDQENKIAMKNCDGVPALTRLLRKTRDQDLTDTITGTLWNLSSHDSV
KMEIVDHALHALSDEVMVPHSGWEKGSNGAGGGEENCKPRHLEWETALTNTAGCLRNVSS
ERSEARRKLRECTGLVDSLMYIVQSQIDCKDVDNKLIENSMCLLRNLSYQVHREIPGCER
YQEAAPINQGPAPSSQKGGCFSSRKGKDEWFSKGRKDEDAASDVIDIPKRTTPAKGYELL
YQPEVVRIYTSLLKESKNPTVLEASAGAVQNLCAGRWTYGRYIRALLRQEKGLPMMTELL
AHGNDRVVRAMSGALRNMAIDARNRDLLGKHAVPHLVANLPGGGQSQPVRALSEETVVSV
LSTLHEVLGSSLEAAKILRASQGIERLVLINKDGNRSEREVRGAGLVLQTVWGYKELRRT
LEKDGWKKTDFMVNLNPPSNNSRANGGYEDSTLPLIDKGGKGDRDMIPMNDLGPDAYSTL
DQRGRRNTLDNTLEPADKDAVQGGMYGERQASLPLMDSYDEKLIVCITRRQPPPTYCPC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcattctgtgttgcctgtgtggagacgcgcagtttgttgtttcagccactgtcc
cttggtgtggtctgccaggtagagcagggagacacagggttggcggcggtggtggtggag
cagcagcgagggacaagagcaagaacctgttgtaacggccgcataccttgtaatgcagac
atagagaggctgacactgaacgagggttacatcaacggcacacatcacttcaggatggag
cctggtcaggtgatgcaggagacgtacacagtggaggaggaaccccaggagtctcagccc
gtcgtctctgtgaccagtgaagatggaaccactcggcgcacagaaaccacggtaaagaaa
gtagtaaagaccactaccactcgcacagttatcccttctgtgtcagacacactttccctg
gatggtgggggatcagtgactggcatggggggctacaccactcccatggaccgggtctac
aggccgccacctagtggaggaatgccaatggactatcccactcacaccgtgccccgaaac
taccactacggacctccagggggttatgacgattaccgcagtgggcctccgtctgagacc
tacgcaagccttagcaggggcgctcacatggacgatcgctacagaccggttcatccagac
ggttacagaacgctggatccaagctacagagccaccagcaggaaccagctggacccctat
gctgcacagccacaggttgggcgtatgggaagtgctatggagctttcctccctcccgagg
tttgttccagagccttacggtctggaggatgatcagcgcagcatgggttatgatgagcct
gactatgggatgggacacccaatgcactacagcaccgtgccccgcaacccgcatgtattc
ccccatggccccccacgccgcgctgggagttacgagggcaccttggatggagacatgagt
ggtccaggggacatgtattactgggggggaggagcacctctggcccagggtgaaagagga
agcatggcatcgttggacagcacactgaggaaaggtcccggccccagtggctggcgtcag
ccagagctgccagaggtcatcgccatgctcaactacaggctagaccctgtcaagagcaat
gcagccgcatacctgcagcatctcacctataagaatgataaagtgaaaactgatgtgcgt
cgtatgaaaggcatcccagcactggtttccatgcttgacaacccaaacaaagacgttcac
tacgcagcctgtggagcactaaagaacatctcttatggcaaagatcaagaaaacaagatc
gccatgaagaactgtgacggagttcctgcgctgaccaggctgctgaggaagacccgtgac
caggacctcactgacacaatcacaggaacgctgtggaacctgtcgtctcatgactctgtg
aaaatggaaattgtagaccatgcactgcacgccctctccgacgaggtgatggtgccccac
tcgggctgggagaaagggagcaacggagcaggaggcggcgaggagaactgcaagccccga
cacctcgagtgggagacggccctcaccaacacagcaggctgcctgagaaatgtgagttcg
gagcgaagtgaggcgaggaggaagctgagggaatgcacaggattggtcgattcgcttatg
tacatcgtccaatcccagatcgattgtaaagatgttgacaataagttgatagagaacagc
atgtgtctgctgaggaacttgtcctatcaggttcaccgtgaaatccctggctgtgagcgc
taccaggaggccgcgcccatcaaccagggccctgccccctccagccagaagggcggctgc
ttcagctcccgcaagggcaaagatgagtggttttccaaaggtaggaaagatgaggatgca
gcttcagatgtgatagacattccaaagaggaccacgcctgctaaaggctacgagctgttg
taccagccagaggtggtccgcatctatacctctctgctaaaggagtctaagaaccccact
gtgctggaagcatcggctggagctgttcagaacctgtgtgccggccgctggacttatggg
cgatacatccgtgccttgctgcgccaggagaagggtctacccatgatgactgagctgctg
gcacacgggaacgaccgcgtggtccgagccatgtctggagccctccgcaacatggctatt
gatgcacgtaatagagatctactaggaaaacatgcagtgcctcaccttgttgccaacctg
cccggtgggggtcagagtcagccggtgcgagcgctgtcagaagagacggtggtgtcggta
ttgagcacgcttcatgaggtgctgggctccagtctggaagcagccaagatcctcagggcc
tcacagggcatcgagagactggtgctcattaacaaggacggtaatcgttcagagcgggag
gtgcgtggcgccggcctggtgctgcagacagtgtggggatacaaggagctgcggcgcact
ttggagaaggacggctggaagaagaccgacttcatggtcaacctgaaccctcccagcaac
aacagcagagccaatggaggatatgaggacagtacactgccactcatagacaaaggcggc
aaaggggatcgggatatgattccaatgaatgacttgggaccagatgcctactccacactg
gaccagagagggagaagaaacactctagataatacactcgaacctgctgacaaagatgca
gtacagggagggatgtatggggagaggcaggcctctttgcctctaatggattcttacgat
gaaaaactgattgtgtgcatcacaagacgacagcctcctcccacctactgcccttgctga
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