Hippoglossus stenolepis (Pacific halibut): 118125018
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Entry
118125018 CDS
T08308
Symbol
si:ch211-57n23.4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 3
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118125018 (si:ch211-57n23.4)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
PUNC
118125018 (si:ch211-57n23.4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_C17orf99
Ig_4
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
118125018
NCBI-ProteinID:
XP_035039225
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Position
17:21948263..21971059
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AA seq
709 aa
AA seq
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MKPRLLLICLASFYCLGGCLASELSFLLEPSDVIAVRDQPLMLDCGVQGEEPIMVTWRKN
SVPIPTSPRVQVLANGTLFIQSFQKRREGSDADMGEYDCAAQNRYGMLVSRKAKVLLSSL
PKFHTHPVSMAVDEGSVARFQCQINGVPEAKITWERDRVTLNTTDNRYTLLPMGILQVTG
VRQADAGIFRCVATNPANTRYSHEAILNVTGGAPRIYKEPFILSGPQNLTITVHQTAILE
CIATGNPKPIVSWSRLDGRSIGVEGIQVLGTGNLMISDVSLQHSGVYVCAANRPGTRMRR
TALGRLVVQAPPEFLQWPQSVSKPAGGSVVFSCVAQGVPEPHLIWLKNGKVLMPGNNVKL
TNNNSTLALTRISSEDEAIYQCIAENSAGTNQASARLAVVQSKDLPAAPQGFKVSVLSTI
ALQITWSQPPSDITDSIIGYVLHIRKTGEPDSLELQEAISKGKFQHDITNLEPATTYSLY
LKAYSPLGASQQSHTVVATTLGGVPTPPTFFTKVVNSSAVQVLWELPSKAGKAEGFRLSY
RKVPNADFQGPIQLPCHINAHTISNMEPGAVYEIKLVAYNGNGVSDCSKRLVSLGEEGAS
DQNTGENSLCQCRDGEASLGSIIIGIHIGTACIIFCVLFLVFGYRRSFFCSKGTQDSWSV
PRNNTGHIGNPKAEANCSRMESVPEVVCPVQCQVIIEQQSSGLPGMGPG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaagactccttctcatctgcctggcatccttctactgtctcggtggctgtctg
gcctcagaactctctttcctgctggagcccagtgatgtgattgcagtaagagatcagcct
ctaatgctggactgtggggtgcagggtgaggaaccgatcatggtgacgtggcgtaaaaac
agtgtgcctatacccacgagtccacgggttcaggtgctggcgaatggcacactgttcatc
cagagcttccagaaacgcagagaggggagcgatgcggatatgggcgagtacgactgtgct
gcccaaaatcgctatggcatgctggtcagccgcaaagccaaagtcctcttgtcatctctt
cctaagttccacacccaccctgtgtccatggcggtggatgagggaagcgttgctcgtttc
cagtgtcagattaatggggtacctgaggccaagatcacctgggagagagacagagtaaca
ctcaacaccactgacaacaggtacactctgctgccaatgggtattctccaggtgacaggt
gtgaggcaggcggacgctgggattttccgatgtgtcgccaccaacccggccaatactcgc
tacagccatgaggccattctcaatgtcactggtggagctcccagaatctacaaggagcca
ttcatcttgtcaggacctcagaatctaaccatcactgtccatcagacggccatcttggag
tgcatagccactggaaacccaaagcccatagtttcctggagcaggctagatggacgctcc
attggggtggagggtatccaggttctgggtacggggaacctgatgatctcagatgtgtcc
ttgcaacactctggtgtgtatgtgtgtgctgccaatcggcctggcaccagaatgagacgc
acagcactcggccgactcgtggtgcaagctccaccagagttcctgcagtggccgcagtct
gtgtccaaaccagcagggggcagtgttgtgttcagctgtgtggcccagggtgttccagag
cctcacctcatctggctgaagaacggcaaggtcctgatgcctggaaacaatgtcaagctg
accaacaacaacagcactctggctctgacccgtatcagttcagaggatgaggccatttac
cagtgcatcgccgagaacagtgccgggaccaaccaggccagcgcacgtttggctgtggtc
cagagtaaagacctgcctgccgccccccagggcttcaaagtcagcgtcctgtccacaatt
gccttgcagataacatggagccaaccgccctccgacatcactgacagcatcattggttat
gttctgcacatccgcaagacaggagagcctgacagtctggagctgcaagaagctataagt
aaaggcaaattccaacatgacattaccaacctggaaccagccaccacctactccctctac
ctgaaggcctactctcctctgggagccagccagcagtcccacactgtggtggctacaaca
ctaggtggagtgccaacccctcccaccttcttcaccaaggtggtgaattccagtgctgtg
caggtcctctgggagctgcccagtaaggccggcaaggctgagggcttcaggttgtcctac
cgcaaggtccccaatgctgacttccagggacccatccagctgccctgtcacattaatgcc
cacaccatctcaaacatggaaccgggtgcagtgtatgaaatcaaactggtggcctacaat
ggaaacggggtgagtgattgttccaagagactggtatcactgggagaggaaggagccagc
gaccaaaacactggagagaacagtctgtgtcagtgcagggatggagaggcctctctgggc
agcatcatcattggcatccatattggcaccgcctgcatcatcttctgcgttctatttctc
gtgtttggataccgtcgcagttttttttgcagtaaaggaactcaggacagctggtctgtg
ccgaggaacaacacaggacacatcggaaaccctaaagctgaagccaactgctccagaatg
gagtcagtgcctgaggtggtctgtccagtgcagtgccaggtcatcatcgagcagcagtca
tcaggtttacctggcatgggccctggctaa
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