Hippoglossus stenolepis (Pacific halibut): 118125035
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Entry
118125035 CDS
T08308
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118125035 (rnf115b)
04121 Ubiquitin system [BR:
hsp04121
]
118125035 (rnf115b)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118125035 (rnf115b)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118125035 (rnf115b)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118125035 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
Zn_ribbon_19
zf-ANAPC11
zf-RING_UBOX
zf-rbx1
zf-RING_5
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
118125035
NCBI-ProteinID:
XP_035039273
LinkDB
All DBs
Position
17:6982531..6988554
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AA seq
300 aa
AA seq
DB search
MAEAAEAPQHRFFCHCCKCETNPKLPDLVCPRCDSGFIEEVTEDSSLLQDSTSAASEDSN
SLFSELWQLLFMERSALLSHPPSSESHPDDSEQVSAGQSRPSLVSPAASADAAAEAQEPE
SPSQPEQERSSRPEQRPAVEGIVQQFLADLFASNGNPGAAPAALSSMLQLHSNPGDYAWG
QGGLDAVITELLGQLESTGPPPAEKEMISSLPKVCVSQEQIDCRLECPVCREEYSLGESV
RKLPCLHYFHGHCIVPWLELHDTCPVCRKSLDGVDNSLPPTAEPPEDHSVRTEQPERQVI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggaggcaccacaacaccggtttttctgtcactgctgtaaatgtgaa
actaacccaaaactcccggatcttgtctgtcccagatgtgactctggcttcattgaggag
gtgacagaagactccagtctcctgcaggacagcacgtccgcagccagtgaagactcaaac
tcgttgttctcagagttatggcagctgctgtttatggaacgctctgctctgctgtcgcat
ccgccctcctcagagtcccacccagatgacagcgagcaggtatctgcaggtcagagccgt
ccgtctctggtgtcaccagctgcctccgccgacgccgccgccgaggcccaagaaccagag
tctccctcccagcccgaacaagagaggtcgtccaggccggagcaaaggcctgcagtggaa
gggatcgtgcagcagttcttggccgacctcttcgccagcaacgggaaccccggtgcagca
ccagctgcattatccagcatgctacagttgcactcaaaccctggagactatgcgtggggt
cagggaggtctggacgctgtcatcacggagttgttaggacagctggagagcaccggtcca
cctcctgctgaaaaggagatgatctcgtccctgccgaaagtttgcgtctcccaggagcag
atagactgcagactggagtgtccagtttgcagggaggagtattcactaggggaatctgtc
aggaagcttccctgcctccattacttccacggtcattgtatagtgccttggctggagctg
catgacacctgcccggtgtgccgcaaaagcctggatggcgtcgacaacagcctcccgccc
acggcagagcccccggaagaccactccgtcaggacagagcaaccagagaggcaggtgatc
tga
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