Hippoglossus stenolepis (Pacific halibut): 118125037
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Entry
118125037 CDS
T08308
Name
(RefSeq) lamin-A isoform X1
KO
K12641
lamin A/C
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04210
Apoptosis
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118125037
09142 Cell motility
04820 Cytoskeleton in muscle cells
118125037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118125037
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
118125037
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Gene cluster
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Motif
Pfam:
Filament
LTD
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
118125037
NCBI-ProteinID:
XP_035039276
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Position
17:complement(4266548..4273240)
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AA seq
643 aa
AA seq
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MATPKTTPRGASSPISPNRITRLQEKQDLSNLNDRLAVYIDKVRYLENENAGLRLRITES
ETEVSRELTGLKAAYETELADARQTLDSVAKERARLQLELGKLKDDYKELKARNTKKESE
LAGALQRVKDLEALLNSKDASLTTALGEKRNIEVENRDQRAQVAKLDTSLSDAKKKLQDE
MLRRVDGENRIQTLKEELEFQKNLQAEELRETKRRHESRMVELDNGHQQEFESKLAEALV
ELRSQHDLQIKMYKDDIGKTYNSKLENARQSADRSSHLVGEAHEELQQTRIRLESSSSQL
SQLQKQLSACEAKVRDMEAALSRERDTTRRLLGDKDREMAEMRQRMQQQLDEYQELLDVK
LALDMEICAYRKLLEGEEQRLRLSPSPPPTRVAGSRSSTSAAHSRSVHCSAQSSPTKRRR
ANDTDSEASSFAGGAVARTRITQQASASGRVTVEEVDQEGKYVRLSNKADEDQNLGSWQV
KRQVGSGAAISFKFPTKFTLKAGQRVTIWASGAGGAHNPPSDLVWKTQTSWGTGDLFQTT
LISASGEEMAMRKVTRIQFEDEDDDMQVAHSTCGDGEYNLRSRTVVCGSCGLPSDKSSNC
SVTSASRSFRSGGISEGLLPHSYVFSSSTPRRAGSRVETCPIM
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacccaaaaccactccgcgaggtgccagctcaccaatatcccccaaccgcatc
acccggctgcaggagaagcaggacctgtccaacctcaacgaccgtctggccgtgtacatc
gacaaggtccgctacctggagaacgagaatgccggcctgcgtctgcgcatcaccgagtcc
gagacggaggtcagccgggagctgacgggcctgaaggccgcctacgaaaccgagctggcc
gatgcccgtcagaccctggactccgtggccaaagagcgagcccgtctgcagctggagctg
ggaaagctgaaagacgactacaaggagctgaaagccaggaacaccaaaaaggagtccgag
ttggccggagcgctgcagagagtcaaagacctggaggctctgctgaactcgaaggacgcg
tccctgaccacggctctgggggagaagcgtaacatcgaggtggaaaacagggaccagagg
gcccaggttgccaagctggacaccagtttgagcgacgccaagaagaagctccaggacgag
atgctgaggagagtggacggagagaatcgcatccagactctcaaggaggagcttgagttc
cagaagaacctccaggcggaggagctgcgggagacaaagcggcgtcatgagtctcgtatg
gtcgagttggacaacggccaccagcaggagtttgagagcaaactggcggaggcgctggtg
gagttgcgttcccagcacgacctgcagatcaaaatgtacaaggacgatattgggaagacc
tacaactctaagctggaaaacgctcgccagtcggcggacaggagcagccacctggtggga
gaagcacacgaggagctgcagcagacacggatccgcctggagtcctcgtcgtctcagctc
agccagctgcagaaacagctgtcggcctgtgaggcgaaggtgagggacatggaggccgct
ctgtctcgggagcgggacaccacccgtcgcctgctgggagacaaggacagagagatggcc
gagatgaggcagcggatgcagcagcagctggatgagtatcaggagctgctggatgtcaag
ctggctctggatatggagatatgtgcctacaggaagctgctggagggggaggagcagaga
ctgcgactgtcccccagtcctccgcccactagagtggcaggaagtcgttcctctacctcg
gcagctcactctcgatccgtccactgcagcgctcagagctctcccaccaagaggcgccgg
gccaacgacaccgacagcgaggcctccagcttcgcaggaggagctgtggcccgcactcgc
atcacccagcaggcgtcggccagcgggcgggtcactgtggaggaggtggaccaggagggg
aaatatgtccgactcagcaacaaagcagatgaggatcagaatctagggagctggcaggtg
aagcgacaggtggggtcgggcgcagccatcagcttcaagttcccgactaaattcaccctg
aaggccgggcagagggtgacgatctgggcctctggtgctggcggagcccacaatcctccc
tctgacctggtgtggaagactcagacgtcctggggcaccggggacttgttccagacgact
ctgatcagtgccagcggagaggaaatggcaatgaggaaagtcacccgcatacagtttgaa
gacgaggacgatgacatgcaggtggctcacagcacttgcggggacggtgagtacaacctg
cggagccggaccgtggtctgcggctcctgcggacttccctcggacaaatccagcaactgc
tccgtgacctcggcctcccgctccttccgcagcggaggcatctccgagggtttactgccc
cactcctacgtgttcagcagcagcactcctcgcagggctggatccagagtggagacctgt
ccaatcatgtga
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