Hippoglossus stenolepis (Pacific halibut): 118125058
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Entry
118125058 CDS
T08308
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118125058 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118125058 (pex1)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
118125058 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
RNA_helicase
NACHT
NPHP3_N
AAA_18
AAA_28
ABC_tran
AAA_33
AAA_5
TIP49
DUF815
AAA_24
AAA_2
Sigma54_activ_2
ATP-synt_ab
Viral_helicase1
AAA_29
RuvB_N
TsaE
Mg_chelatase
APS_kinase
IstB_IS21
Vps4_C
AAA_23
cobW
FtsK_SpoIIIE
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
118125058
NCBI-ProteinID:
XP_035039302
LinkDB
All DBs
Position
17:11389486..11400151
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AA seq
1255 aa
AA seq
DB search
MFTNQGIQPVTVVFNNAKNCFLHLPPRLISHLSLNENQALELSWDHGSPLYLSWTLNRTS
SSYDSHEVELCRQLGEKLGLKDGEQGFLKPCHQVSSVHQVFVEPLSSDDWEILELHSAAL
EQQLLDQIRVVFQDAVFPVWVDSHTVIYIRIASLSPSVPYGRLEQFTELVVSPKSRAGIS
DLSSSPVRSSVESSLQIENTDLYSSSSGQSLENNALVPQSHQWGGIADLRSLLRYMIKGT
YDPIKEPPPVPGIPAIFTDSIYRVCGAPPDSLCTISHAATSVIHLFPSRHGLNDGFIGGQ
SLVTYGLLSKVPAPKETRARVKQAMEKKKNTRVTKVDASTEGGEDMKEEEVMVVRVVYHC
DEKLYGKQSSLRKGEIHSGRVWIPQPLAVSLNISPHSVVRIKPVKSSIKVASAIRLQPLT
PLPEEDDEAIQTAFLGWLHTQSHEPLACLTARSGTVLLHGTDAKLEFALTVLKPEAASDP
PDQLFLLAHTVIQKEHIQVHRESVTMPAVKAEAETPNPALPSLSVLGGIDELSTTGFEFI
SCCLLGSPLSRELGTTGQGLQGGALLITGAKGSGKSTLSQALCRKAREDLDAHVEVVDCR
KLQGKRAESVRQMLQEIFEQAEWKQPSVVLLDDLDQVTGAPTSPEHEHGPEALLQQHIAQ
SLKDVVDEVVVHSSLVCLIITSQSEHSLHPSLTEVHGSHFIQRFVNIQPPDQAQRAEVLR
RLILRRSGLSEETLQILDLGAVAKETEGYAPQDLALLLERAVHANTVQSGHSDQGVFLSW
SDFAQALKGFTPPSLWGADLHIPSGTGLERVGGLREVRQQLMDTILLPAKYPILFSNLPI
RHCSGILLYGAPGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQGVRDVFQRAQA
AKPCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAASSRPDLIDP
AVLRPGRLDKSLYCPPPDLESRVEILRALSSGVPLAADVDLEQLAALTEQFTGADLKALL
YNAQLEAIHNSLGTSTPNELTCGSDSDMSLSSMIFPNNISGSDDSVGEGDPAAGLDQSMV
LLEPDELHVENEHHRSNIWRLYFGSSDESELGNSPISGLNSQCVSGPSSMTQECVGASAR
DPSGSLPPAYMSSLQRGYEELSPEQLERLQQDVNSIKNNYRRANEEGPRVPSASTQPGLL
LCQAHMNSALAATRPSLSKSDWNRYTKLYENFGGSGDGKSLHSVTFKPGQRVTLA
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaaccagggcattcaaccggtgactgttgtttttaacaacgcaaagaactgc
ttccttcacctcccaccgaggctgatatcccatctgtccctgaacgagaaccaagctttg
gagttgtcctgggaccatgggtcaccactctacctcagttggacactaaacagaacctcc
tccagctatgacagccatgaagtggagctgtgtcggcaactgggagaaaagttggggctg
aaagatggagagcagggcttcctgaaaccatgtcaccaggtctcatcggtgcatcaagta
tttgtggagcctctttcatctgatgactgggagatcctggagcttcacagtgctgcactg
gagcagcagctgttagatcagatcagagtggtgttccaagatgctgtctttcctgtgtgg
gtggacagccacacagtcatctacatccgaatagcatcactttcgccatctgtgccctat
ggtcgcctggagcagttcacagaactagttgtgtctccgaagagccgtgctgggattagt
gacctcagtagttctccagtgaggagcagtgtggaatcgagtcttcaaatagagaacact
gatctctattcatcctcctctggacagtctttagaaaataatgctcttgtccctcaaagc
caccagtgggggggcatagctgacctgaggagcctcctgcgctatatgataaagggcact
tatgacccgattaaagagccaccaccggtccctggcatccctgctatctttactgactct
atctacagagtatgtggtgcacctcccgactccctttgcaccattagccacgctgcaacc
agtgttattcatttatttccatcgaggcatggactaaatgatggattcattggaggtcag
tctctagtgacatacggtctgctctccaaagttcctgcccctaaagaaacaagggccaga
gtcaagcaggccatggagaaaaagaagaacacacgagttactaaggttgatgcctctacg
gaggggggtgaggacatgaaagaagaagaggtcatggtggtccgggtggtataccattgt
gatgagaaactatacggcaaacaaagcagtctcagaaagggagagatccatagtggaaga
gtatggatcccacagcccctggctgtcagcctgaatatcagcccacattcagtggttcga
attaagcctgtaaaatcaagtatcaaagtggcctctgctattcgtctacagcctctgaca
ccactgcctgaggaggacgatgaggcgatccagacagctttcctcggttggctgcacact
cagagtcatgaacctttagcctgtctgactgcacggtctggcaccgtcctcctacatgga
actgatgcaaagttagagttcgctttaactgtactgaaaccagaagcagcaagtgatcct
cctgaccagctgtttttactggcacacactgtcattcagaaggaacacatacaggtacac
agagagtcagtgaccatgccagctgtgaaagctgaagctgaaacaccaaacccggcgctt
ccctccctcagtgtcctcggtgggatagatgagcttagtacgactggattcgagttcatc
tcctgttgccttctgggtagtcccctttcacgagagcttggtaccactggtcagggtctc
caaggaggagctctactcatcactggtgctaagggaagtgggaagagcactctttcccaa
gccctctgcagaaaagctagagaagatttggatgcccatgtggaggtggtggactgcaga
aagctacaaggcaaaagggcagaaagtgtgagacagatgctgcaggagatttttgaacag
gcagagtggaagcagccttcagttgttcttcttgatgacctggatcaagtaacaggggca
ccaacctcaccagaacacgagcacggccctgaggcgctgctgcaacagcacattgctcag
agtctaaaggatgtggtggatgaggtggtggttcactccagcctggtgtgtctgatcatc
accagccagagtgagcactctctccacccctcgctgaccgaagtgcacgggtcccacttc
atccagagatttgtaaacatccagccaccagaccaggcacagagagcagaggtcctgcgg
cgtctcatcctcagaaggtccggtctgtccgaggagaccttacagattcttgacctgggg
gctgttgccaaggagacggagggttacgcacctcaagacttggcactgctgttagagcga
gctgtccatgctaacacagtacaaagcggacacagtgatcaaggtgtgtttctatcgtgg
agtgactttgcacaggctctgaaagggttcacgcctccctcgctgtggggggcagacctc
cacatcccaagtggaactgggctggagagggtgggagggctgagagaggtgcggcagcag
ctcatggacacaatactgctccctgccaagtatcccatcctcttctccaatcttcctatc
cgccattgctcaggaatattgttgtatggagctcctggtacagggaaaaccctgctggcc
agggctgtggccaaagacagtggtatgaacttcatcagcatcaagggacctgaacttctg
agtaagtacatcggagccagtgagcagggagtccgggatgttttccagagggcacaagca
gccaagccgtgcatcctgttcttcgatgagtttgactctttggcccccaggaggggccac
gacagcacaggagtaaccgaccgtgtggtgaaccagctcctcacccagctggatggggtg
gagggactccagggtgtgtatgtgcttgcagcctccagccgcccagatctgatcgaccca
gccgtgctgagacctggacgactggacaagtccctttactgcccccctcctgacctggag
tctcgtgtggagatcctcagggctctgagtagtggtgttcccctggcggctgatgtggac
ctggagcagctggcagccctgacagagcagttcacaggggcagacctgaaggccctgctc
tacaacgcacagctggaggccatccacaacagcctgggcaccagcacaccgaatgagctg
acctgcggctcagacagcgacatgagtctgtcctccatgatcttcccaaacaacatcagc
ggctccgatgattcggtcggggagggagacccagccgcgggtttggaccagtccatggtt
ctgctggagcccgatgagctccacgtagaaaacgaacaccatcgcagcaacatctggaga
ctctactttggaagctccgacgagtcagagttggggaattcaccgatttcaggactgaac
tcccagtgcgtctctggacccagctccatgacccaggagtgtgtaggggcatcagctcgt
gaccccagcggctctctccctcctgcctacatgtcctccctccagaggggatacgaagag
ctgagcccggagcagttggagcgcctacaacaagacgtcaacagcatcaagaacaactac
aggagagccaatgaggagggtccccgggtcccttcagcctccacccagccgggcctgttg
ctgtgtcaggctcatatgaactctgccctggctgcgaccagaccgtctctcagcaagtcc
gactggaacagatacacaaaactgtatgaaaactttggcggttcaggagacggaaaatct
cttcactccgtcacatttaaacctggacaacgtgtaactttagcttga
DBGET
integrated database retrieval system
