Hippoglossus stenolepis (Pacific halibut): 118125070
Help
Entry
118125070 CDS
T08308
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hsp01006
]
118125070 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118125070 (trit1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
118125070 (trit1)
Prenyltransferases [BR:
hsp01006
]
Compound prenylation
tRNA dimethylallyltransferase
118125070 (trit1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
118125070 (trit1)
Prokaryotic type
118125070 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
zf-C2H2_jaz
zf-met
AAA_16
AAA_33
RNA_helicase
AAA_22
AAA_5
Motif
Other DBs
NCBI-GeneID:
118125070
NCBI-ProteinID:
XP_035039330
LinkDB
All DBs
Position
17:15916228..15955682
Genome browser
AA seq
479 aa
AA seq
DB search
MAASTLSVQGAVRRAMAPALVVILGATGTGKSKLAIEIGKRLQGEIISADSMQVYQGLDI
ITNKVTAEELSQCRHHMISFVDPLVSSYTVVDFRNKALALMDEMQVSSTLPIVVGGTNYY
IESLLWKVLLDSGQENEESGDGGDGTPDRKLELEKLGGSELHKRLAEVDPKMAAMLHPND
KRKIARSLQIHKETGLPHSHWLEEQRGQEGGNGLGGPLRYPDPCIFWLHADMEALDKRLD
ARVDEMLSAGLIDELRDFHVRYNQQKVQDDSQSYQLGIFQSIGFKEFHAYLTAPESSTQQ
EKDALRVKGVEAVKIATKRYARKQNKWVRNRFLKRPGDNVPPVYGLDVTDVSRWEETVLN
PALQILDSLSKGEEPTIPPIRVQEAGQKNKRSLHTCDLCDKVIIGDLEWTAHLKSKKHHY
HVKKKRKTDPACGSQGSADAPVSAAETLPEDAVAPGSTETFQESSQDARTTHEEVPVKL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccactctcagcgtgcagggcgccgtgcggagagcgatggccccggcgttg
gtggtgattctgggagccaccggcaccggcaagtccaagctggcgatcgagatcggaaag
cggcttcagggggaaataatcagcgccgactccatgcaggtgtaccagggcctggacatc
atcaccaacaaggtgacggctgaggagctctcccagtgccgacaccacatgatcagtttc
gtggacccgcttgttagcagctacacggtggtggacttcaggaacaaagctctggctcta
atggatgagatgcaagtcagcagcacactgccgatcgttgttggaggaacaaattattac
attgagtctctgctgtggaaagtcctgctggattcagggcaggagaacgaagagtcagga
gatggaggagatggaaccccagacaggaagttggagctggaaaaactgggaggatctgag
ttacacaaacgtctggcggaggtggaccccaaaatggctgccatgttgcaccccaacgac
aaacgcaagattgccaggagccttcaaatccacaaggagacaggcctcccccatagtcac
tggttggaggagcagagggggcaggagggaggcaatgggctgggggggccactgaggtac
ccagacccctgcattttctggctgcatgctgacatggaagctctggacaagcggttggac
gctcgtgtagatgagatgttatctgcaggactgatagacgagctcagggacttccacgtc
cgctacaaccagcagaaagtccaggatgacagccagagctatcaacttgggattttccag
tcgatcggttttaaggagtttcatgcctacctgaccgctccggaaagcagcacccagcaa
gagaaagacgcactacgagtcaaaggtgtagaagctgtgaagatcgctacgaagcgctac
gcccgcaaacagaataaatgggtccgaaaccgctttcttaaacgtccgggagacaacgtg
ccaccagtgtatggcctggatgtgacggacgtgtcgaggtgggaggagacggtgctgaac
cctgcactgcagatactggacagtctcagtaagggtgaggagccgacaattccaccaatc
agagtgcaggaggcggggcagaaaaacaaacggagcctccacacgtgtgacttgtgtgac
aaagtgattatcggtgacctcgagtggacagctcacctgaagtccaagaagcatcactat
catgtgaagaagaagaggaagacggatccagcctgtggatctcagggttcagctgatgct
cctgtgtctgcagcagagaccctcccagaggacgccgtcgccccgggcagcacagaaact
ttccaggagtcctcccaagacgccaggacgacacacgaggaagtaccggtgaaactttag
DBGET
integrated database retrieval system
