Hippoglossus stenolepis (Pacific halibut): 118125071
Help
Entry
118125071 CDS
T08308
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
hsp04148
Efferocytosis
hsp04218
Cellular senescence
hsp04310
Wnt signaling pathway
hsp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118125071 (nfatc1)
04310 Wnt signaling pathway
118125071 (nfatc1)
04020 Calcium signaling pathway
118125071 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118125071 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
118125071 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118125071 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118125071 (nfatc1)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118125071 (nfatc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
118125071
NCBI-ProteinID:
XP_035039332
LinkDB
All DBs
Position
17:complement(4114067..4151091)
Genome browser
AA seq
862 aa
AA seq
DB search
MKSAEEDAYGYTPNVSLSLTLGNPCLPSQYHSLQSSPIISVSVPEPHGYDTQDDMRAAGY
YSSPSSRPNGAPTLESPRIEITAYGQFPEDAVEESSLPVAKRVNSIVTLTLPSGEGYRDP
SCLSPASSISSRSCHSDASYESNFSYNYDNSPQNSPWQSPSVSPKGSTLALPGDGCAAGG
SPSTSPRTSITDDTWMGQRGSRPNSPCGAKRKYSLNGSRAPHKHYPYSPNHSPGLSPQTS
PRLSVTEESWLPNTNQYTNSAILAAINALTTDGVADLGEGIPMKARKTSMEHSPTVSLKV
EPGSEELSPGHLCDDEHSNRMLLKKEGYCGGFLDVPQHPYSWSKPKQYVSPSLPALDWQL
PSSSGPYSLQIDVQPKSHHRAHYETEGSRGAVKAMAGGHPVIQLHGYMESEPLTLQLFIG
TADDRLLRPHAFYQVHRITGKTVSTPSHEALHNNTKVLEIPLLPENNMRAIVDCAGILKL
RNSDIELRKGETDIGRKNTRVRMVFRIHINQATGRTLSLQAASNPIECSQRSAQELPLVD
KQSLETCPAHGGERMRLDGHNFQHDSKVVFVEKAQDGHHLWETEAKIEKDASKPNSLLVE
IPPYRNQRLSTPVHVNFYVCNGKRKRSQYQRFTYVPANVPTIKTEPHDDYDAPLVCTQHG
STVSLHPKPYFPPQVMTPMMTSDLRSCVVGGAYPVSQERLAAKPASLPSSSSPSTSPKLH
DLSPSHFSKCLPAGPQGPQSPIPHVSIIQETPGRYQLPSLYPPSSSSSSSPTSQPSTPTD
GPFSPTHCMTPAQPVSGSTSPDAQQPPKAPERGRASLQEDGSSPPLAVSIKQEPQELDQM
YLDDVNEIIRNDLSSITVHSHA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggctgaagaggatgcatatggctacacgccaaatgtcagtctctccctcacg
ctgggcaacccctgtcttccgtcccagtaccacagcctccagtccagccccatcatatct
gtgtctgtccccgagcctcacggttacgacacccaggacgacatgagggccgccggctat
tactcgtccccaagcagccgcccaaacggagcgccaaccctggagagccctcgtatcgag
atcacagcgtacggtcagtttcctgaagacgcggtggaggagagcagccttcctgttgct
aagcgagtcaactccatagtgacactgacccttcccagtggagaaggttaccgcgacccc
agctgcctgagtccggccagcagcatctcgtctcgcagctgccactccgacgcttcctac
gaatcaaacttctcctacaactacgacaactcgccccagaactccccctggcagtctccc
tccgtgtcccccaagggctccaccctcgccctgccgggtgatggctgtgccgccggtggc
tccccctccacctctccacgcacgagcataacagatgacacctggatgggtcagcgtggc
tccaggcccaactctccttgtggtgcaaagaggaagtacagcttgaatggcagcagggcg
ccgcacaagcactacccttactcccccaaccactcccctggactgtctcctcagacctcc
cctcgcctcagcgtcacggaggaaagctggcttccaaacaccaaccagtacaccaattca
gccatcctggcggccattaacgccttgaccacagacggagtggctgacctcggggagggg
atccccatgaaggccaggaaaaccagcatggagcacagccccaccgtcagcctgaaggtg
gagccagggagcgaggagctgagtccggggcatctttgcgatgacgagcactcgaaccgc
atgttgttgaagaaggaaggctactgcggcgggtttctggacgtgccacagcatccgtat
tcctggtccaagccaaagcaatatgtaagcccgtccctgccagctctcgactggcagctg
ccatccagctcggggccgtacagcctgcagatcgatgtgcagcccaagtcccaccaccgg
gcccactacgagacggagggcagcaggggggcggtgaaggccatggcaggaggacacccc
gtcatccagctccacggctacatggagagcgagcctctgaccctgcagctgttcatcggc
acggccgacgacaggctgctgaggcctcacgccttctaccaggtccaccgcatcaccggc
aagacggtgtccaccccgagccacgaggctctgcacaacaacaccaaggtgctggagatc
ccgctgctgccggagaacaacatgcgggccatagtcgactgcgctgggatcctgaagctg
cggaactcggacatcgagctgcggaagggggagacggacatcggacgcaagaacacacgc
gtgcggatggttttcaggattcacatcaaccaggccaccgggagaacgctgtccctgcag
gctgcatccaatcccatcgagtgctcccagagatcggcccaggagctgccgctggtggac
aagcagagcctggagacgtgtcccgcccacggaggggagaggatgcgcctggacggacac
aacttccagcacgactccaaagtggtgttcgtggagaaggctcaagacggtcatcacctc
tgggagactgaggccaagattgagaaagacgcctcaaagcctaattcgctgctggtggaa
attcctccgtatcggaaccaaagactctccactcccgtgcacgtcaacttctacgtctgc
aacggcaaaaggaaacgaagccagtatcagcgtttcacctacgttcctgccaacgttcca
acaataaagacggagccgcacgacgactatgacgcccctctggtgtgcacccagcacggc
tccactgtgtccctgcacccgaagccttacttccccccacaggtcatgacccccatgatg
acctctgacctccggtcgtgtgtcgttggcggtgcttaccccgtcagccaggagagactg
gcggccaaacctgcctcgctgccctcctcttcctccccgagcaccagccccaaactgcac
gacctgtcgccgtcacacttctccaagtgcctccctgccggcccccaggggccccagtcc
ccgatcccccacgtctccatcatccaggagacccccgggcgctaccagctgcccagcctc
tacccgccgagcagctcctcctcctcctccccgacctcgcagccctccaccccgaccgac
ggccccttctcgccgacccactgcatgacaccagcccagccggtcagcggcagcaccagc
ccggacgcccagcagccccccaaggcgccggagagagggcgcgcctcgctgcaggaggac
ggcagctccccaccgctggccgtcagcatcaagcaagaaccgcaggagctggaccagatg
tacctcgatgatgtcaacgagatcatcaggaacgacctgtcgagcatcacggtccacagc
cacgcgtag
DBGET
integrated database retrieval system
