KEGG   Hippoglossus stenolepis (Pacific halibut): 118125082
Entry
118125082         CDS       T08308                                 
Symbol
rp9
Name
(RefSeq) retinitis pigmentosa 9 protein
  KO
K19604  retinitis pigmentosa 9 protein
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118125082 (rp9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsp03041]
    118125082 (rp9)
Spliceosome [BR:hsp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118125082 (rp9)
 Complex B
    118125082 (rp9)
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    118125082 (rp9)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    118125082 (rp9)
SSDB
Motif
Pfam: RP9_C RP9_N SR-25 CCDC106 PGA28-like_dom New_glue DUF7792 RESC11 LPMO_AA14
Other DBs
NCBI-GeneID: 118125082
NCBI-ProteinID: XP_035039345
LinkDB
Position
17:complement(11517130..11523760)
AA seq 241 aa
MSDRKRAREKEDRREHKRHKSSKQDLEKLKTHTKKLNQEVQKLKHVETFYEKPPPGLIKE
NDEKPEDCIPAEPGNEDARTFLASAPTRGLWMPLGKEVKVMQCWRCKRYGHRTGDKECPF
FIKGNQKLEQFRVAHEDPMYDIIRENKRNEKETRIQQLQQLLQDTTSSSSSSSSSSDTDS
SSSSSSSSSSSSSSSSSSSSSSSDDHRSKKRNKGKDKKKKDKKKRKSKRKHKSSKTSDVS
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtcggataggaagcgagcgagagagaaggaggacagacgagagcacaagagacacaag
tcctccaaacaggatctggagaaactcaagacacacacgaaaaagctcaaccaagaagtc
cagaagctgaagcacgtggagacattctacgagaaacctcctccaggactcataaaggag
aacgatgagaagccagaggactgtattcctgctgagccaggaaatgaagacgccaggacc
ttcctggcaagcgcccccaccaggggtctgtggatgcctctggggaaggaggtgaaggtg
atgcagtgctggaggtgcaagcgttacggtcacaggacaggagacaaggagtgtcctttc
ttcatcaaaggcaaccagaaactggagcagttcagagtggcccatgaagacccaatgtac
gacatcattcgggaaaacaaaaggaatgaaaaagaaaccaggatccagcagctgcagcag
ctgctccaggacaccacctcctcctcctcctcctcctcttcctcctccgatacagacagc
tcctcctcctcctcctcctcctcctcttcctcctcctcctcctcctcttcctcttcctcg
tcctcctctgatgaccatcgcagcaagaagcggaataaggggaaggacaaaaagaagaaa
gacaagaagaagagaaagagcaagcgaaagcacaagtcttcgaaaaccagtgacgtttca
gattaa

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