Hippoglossus stenolepis (Pacific halibut): 118125096
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Entry
118125096 CDS
T08308
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118125096 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118125096 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118125096 (vps28)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
118125096 (vps28)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118125096 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
118125096 (vps28)
Exosomal proteins of colorectal cancer cells
118125096 (vps28)
Exosomal proteins of bladder cancer cells
118125096 (vps28)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
118125096
NCBI-ProteinID:
XP_035039358
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All DBs
Position
17:10240947..10245488
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AA seq
223 aa
AA seq
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MFHGIPVSGVVGGAPANKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTASCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgggataccagtgtcaggagttgttgggggagctccggccaacaaacctgag
ctatatgaggaagttaaattatacaaaaatgcaagggaacgagagaagtttgataacatg
gcagagttgtttgctgtcgtcaagaccctgcaggccttggagaaggcttacatcaaagac
tgtgtcacacctaatgagtacacagcttcctgttccagactcttggttcagtataaagct
gcattcaaacaagtgcagggatctgacgtgggctccatcgacgacttctgcaggaagtac
agactcgactgcccactcgccatggaaaggattaaggaggatcggccaatcaccatcaaa
gatgacaagggcaatctgaaccgctgcattgcagacattgtctctctcttcatcactgtg
atggacaagctgagactggagatcagggccatggatgagatccagccagacctgagggag
ctgatggaaaccatgaacagaatgagcaacatgcctccagactcagaggctaaggacaaa
gtcagcctctggttgaccaccctcagcagcatgtcggcctcagacgaattggatgataac
caggtgcgccagatgctgtttgacctggagtcggcctacaatgccttcaaccgcttcctc
cactcctcctaa
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