Hippoglossus stenolepis (Pacific halibut): 118125215
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Entry
118125215 CDS
T08308
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1 isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118125215
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
118125215
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
NPHP3_N
Ion_trans
Motif
Other DBs
NCBI-GeneID:
118125215
NCBI-ProteinID:
XP_035039510
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Position
17:complement(7032131..7039934)
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AA seq
687 aa
AA seq
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MDHSPSMNLSVVSGNEVEDQRPLLPPRIVPPPQACSPQCGIHHTIQMSADHTVWLDRTQA
MATTPLYNGHLYVTSSPRSKQRGCKAKGKEKKCGKRSGGSKQTLGHKERNQQCKAKNVGS
NRLQEQVTSFTDVHASPCRSPFRGPCRSHLEITEVEGRGSVCLEMHDRQILPEIIITSKD
DDLQPQNEMSRYHQDLSHTKGRLPGAECPSPSSSSGSSTSTSPPSSPKNKVDGKDDHYWK
THSIGWRLVRRRALFLRRQQLSDCAVAVGIFGVVLMVTETELSWSVYSKSSIYSLALKSI
ISLSTLILLGFIVAFHCCEVQLYVHDIGSEDWRIAMTTDRLALIGLELAVVAIHPYPVGL
LSYFQQTTSRMSLSETELEIVLALPMFFRLYLLGRAMMLHSRLFTDTASRSIGALNKIHF
NTRFVGKTLMTTYPGTVLMIFSVSLWLVAAWGLHVCERHHNYRDLSSNYMEALWMVSVTF
LSIGYGDVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHIS
KRQKIAAANVLRETWLIYKHTKLSRERDNSRVRMHQRKLLLAIHQLRRVKMEKRTLADQS
NSLLDLGKVREMQSLMYDVLSEVQGCRGELDSHIHSLEKHVEELREGFRGLMPLLSNTLS
TQNSSIRHLLREREMKAEAASVSGSDR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaccactccccctctatgaacctgtcggtggtgagtggaaacgaggtggaggaccag
cgacccctcctcccgcccaggatagtccctccacctcaggcctgctctccgcagtgtggg
atccaccacacgatccagatgtcggccgatcacaccgtgtggctggaccgaacccaggcc
atggccaccacacctctgtacaacggccacctgtacgtcacgtcttcccctcgctccaaa
cagagaggatgcaaagctaaaggcaaagagaagaaatgtgggaaaagatcaggggggagc
aaacaaactctgggacacaaggagaggaatcaacagtgcaaagccaaaaacgtaggttca
aacagactccaagaacaagtcacttctttcactgacgtccacgcttctccctgccggtcc
cccttcaggggcccctgcaggtcccatttagagatcacggaggttgagggccgaggcagc
gtctgtttggagatgcacgaccgccagattctccccgagatcatcatcaccagcaaagat
gacgacctccagccacaaaacgagatgtcccggtaccatcaggacctgtctcacactaaa
ggcaggctgccgggggccgagtgtcccagtcccagctccagctccggctccagcaccagc
accagtcctccgtccagcccaaagaacaaggtggacggcaaggacgaccactactggaag
acccacagcatcggctggcggctggtccgcaggagggctctgttcctgaggaggcagcag
ctgagcgactgcgccgtggcggtggggatattcggggtagtgttgatggtgacggagacg
gagctctcctggagcgtgtacagcaagagctccatttactccctcgcactcaagtcgatc
atcagtttgtccacgttgatcctgctcggcttcatcgtggcgttccactgctgtgaggtg
cagctctacgtccacgatattggctcggaggattggcgcattgccatgacgaccgaccgc
ttggctctgatcggcctggagctggcggtggtggccatacatccctatcccgtgggcctg
ctgtcgtacttccagcagaccacgtcccgcatgtcgctgtcggagacggagctggagatc
gtgttggctctgcccatgttcttccggctctacctgctgggacgcgccatgatgctgcac
agccgcctcttcaccgacaccgcgtcccgcagcatcggagcgctcaacaagattcacttc
aacacccgattcgtggggaaaactctgatgacgacgtaccccggcaccgtgctgatgatt
ttcagcgtttctctgtggctcgtggcagcgtggggcttacacgtgtgtgagagacaccac
aactacagagacctcagcagcaactacatggaggcgctgtggatggtctccgtcacattc
ctgtccatcgggtacggagacgtggttcctcacacctactgtggacgcagcatctgcctc
ctcactggtataatgggagccggctgcacggtgctggtggtggcggtggttgccaggaag
ctggagctgacgcgagcagagaagcacgttcacaacttcatgatggactcacacatctcg
aagaggcaaaaaattgctgcggcgaatgtgctgagagagacttggctcatctacaaacac
accaagctgtccagagaaagagacaacagccgagtccgcatgcaccagaggaagctgctt
ctggccatccaccagctgcgtcgtgtaaagatggagaagaggacacttgcagaccaaagc
aactcattattggacctcggcaaggtgagagagatgcagagcctgatgtacgacgtgctg
tccgaggtgcagggctgcaggggggagctggactcgcacatccacagcctggagaagcac
gtggaggagctgagggagggctttaggggcctgatgccgctcctgtccaacaccctgtcc
acgcagaactcctccatccgccacctgctcagggagagggagatgaaggccgaggcggcc
agcgtgagtggcagcgacaggtag
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