KEGG   Hippoglossus stenolepis (Pacific halibut): 118125294
Entry
118125294         CDS       T08308                                 
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118125294 (tdp2b)
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     118125294 (tdp2b)
SSDB
Motif
Pfam: UBA_4 Exo_endo_phos UBA_8 Exo_endo_phos2 TAP_C
Other DBs
NCBI-GeneID: 118125294
NCBI-ProteinID: XP_035039644
LinkDB
Position
17:10086698..10089329
AA seq 361 aa
MASASDSDKPSVSNVEESRSRLCEEFAAITGTDSAAAQSYLSINGWEMEKALNSFFEADM
ERIFEEEDFPERDSCPGTKRKKVEGKPAEPCIDLTKDSPASSRKPSEEDDGKLSVISWNV
DGLDTDNLGERARGLCSFLVLYTPDVVLLQELIPPYVQYLKKRAVSYLIIEGGEEGYFTG
MMLKKSRVKLVESETVTYPTTQMMRNLLVAQVDFKGQKLCLMTSHFESCKAHSAERMKQL
RVVMQRMREAPDDVTVLFGGDTNLRDTEVAKVGLPSSVCDVWERLGKQEHCRYTWDTKAN
NNKTVPYISRCRFDRVYFRPATKDGVPRLAPDHMALVGLEKLDCGRFISDHWGIYCSFSA
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcgtctgcttctgactcggacaaaccgtccgtttctaacgtggaggaaagcaggagt
cgtctctgcgaggaatttgccgccataacgggaactgacagcgccgcggcgcagtcctac
ctgtctataaatggctgggagatggagaaagcgctgaactcgttctttgaggcggacatg
gagcgaatattcgaggaagaagatttcccagagagagactcctgtcctggaaccaagagg
aagaaggtagaaggaaaacctgcagaaccatgcatagatttgaccaaggacagcccagcc
tcctcacgcaaaccgtccgaggaagatgatggtaaactgtcagtgatctcctggaacgtg
gacggactggacacagacaaccttggggagcgcgccagaggcctgtgttccttcttagtc
ttatacactcctgatgtggttctcctacaggagctcattcctccctacgtccagtacttg
aagaaacgggccgtcagctatctgatcattgaaggtggtgaagaaggttactttactggt
atgatgctgaagaagtcacgagtcaaactggtggagagcgagacagtaacttaccccacc
acgcagatgatgaggaatctgcttgtagctcaagtggatttcaaaggccagaagctgtgt
ctgatgacgtctcactttgagagctgtaaggcccactcagcggagcggatgaagcagctg
cgggtggtgatgcagaggatgagggaggcaccggacgatgtcaccgtcctgtttggaggg
gacacaaacctgagggacacagaggtggccaaggtgggcctgccctccagtgtgtgtgat
gtgtgggagcgactgggcaaacaggagcactgccgctacacgtgggacaccaaagccaac
aacaacaagactgttccctatatcagccgttgccgcttcgaccgggtttacttccgccca
gcaacaaaggatggagtcccacgtcttgcccccgaccacatggccctggtgggcctggag
aagctggactgtggacgcttcattagtgatcactggggaatctactgcagcttctctgct
gggtag

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