Hippoglossus stenolepis (Pacific halibut): 118125358
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Entry
118125358 CDS
T08308
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118125358
04091 Lectins [BR:
hsp04091
]
118125358
Proteoglycans [BR:
hsp00535
]
Cell surface proteoglycans
Others
118125358
Lectins [BR:
hsp04091
]
C-Type lectins
Others
118125358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF4381
TMEM154
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
118125358
NCBI-ProteinID:
XP_035039712
LinkDB
All DBs
Position
18:complement(5769768..5784247)
Genome browser
AA seq
2567 aa
AA seq
DB search
MGSFVADVFLLLLISTGQVHGASFYGDGYIHLRTVQASVQNLLHVRFRTSSQAGLLFLAA
GHRDFLLLELISGFLQVRLDLGSGERFLRTETGIHLNDLGWHSMELTHDRHNVTMTVDRN
SRTSLHMPGPDLELTVEDGLFVGGAAGLNHPYILNISSGFRGCVDEVVFNEHNLLSGLRR
YSGYKKVHEVSLGCNLQFSATEEDPVSFFSSKAFMSLPPWDVPQEGVFECELHPSEREQD
GIVLYSSNNQGGFVAIEILDGNLVATIGNGEGSKTELRSLTHVTTNHTWYPIQLHLLPYS
LELKVDKELIKGNLGPELQVIQLRGPLFLGGLDEETREVAQQAGLLSASSFKGCLREIRV
NTQRTGLPHAVITKDITVGCKTGQDPEMGTTNSPTDRPELVITTSQPVTINKRTPNFLLL
RKLEVAEGGRAPLEPKHIKVNLNFRKLGLHPSQLLFRIEEQPVHGQLRLDLRPDPDGTLE
EVGQERTITIGTEEHDRTFSMLDLWQGRVMYVHSGSEDQNDFFIFSTFSSKKELPVFLKG
KRLHRFDISISPVNDAPVLSLPEGNIFTLLEKSKRQLTTDVLRVSDPDSSPAELMFSSLG
ELYTEAGHLQHEDYPERAVNLFSLNDLEEGKISFVHSGVSTTRLPLRVSDGEKSSNTVVL
RIMAVALEHKLVNNTGLEVNQCEASIITTNHLAVQVNVADQAVEIRYDVIEPPQYGELQR
MHSSGDWKSTTSFSQKLLEKERIRYLSSYRGLQTQNNITDQFKCKISIGSLANEEVVVPI
TVRWIHFKVTRSKMEVSGVLSAVVTPENLNVVSKGVRLSENNLYFRLLTLPKKGRLLFDN
NVLQKNSTFSQKNITDGLLKYELFNRLLDDTRDTFSFQVFSTHANSTSYDFRINIKTEST
AFTVVNEGLSIPEGESKVLTKDILFTHTASNREVQYNITVSPKHGQIRRINLSNSTSIND
NIAVFTNRDIAEERIMYVHDDSETKQDSFTFQILVYKPRKQASKKEDRNTAEHTFNISVR
LVNDQRPVRVVDKVFHVARDGQRLVTLSDLRYRDDDSDFEDEWLVYTRRGIPMGELVLAS
NPSHKLYEFTQRDLEQKKVLFVHRGVSFGRFVLFVSDGKHYVSTLLEVMAQDPYLQVENN
TGLLLQRGGISTLTSANLSVFSNLDIRDPQEVTFEVFLPPKRGALCFANGGCDTVKRADA
ISIFTLWDLVAGRLAYHHDGSSQELSDWFNVTAKAREKSNERQPDRGRREVHLDIGVPVK
IYLESHQRQPTVMSNRVVVVEEGQNVSITREHLEVIHEDSQPSEIIFTVQSPPTLGFFHK
SSPINEHQNNGEQQLYQGNREQETTSFTQDDLNQGLIVYHQQAAGSINDSVLLEATNGVT
KVGPIRLEIDIIPLLLPLQVSDLTLDEGSSLPLTPDIVKVANHHFSGMNFLYQVIVPPRH
GHLEHSRIPGMPITAFTHTELEREYISFIHDGSDTQSDNFTLVANQTEIGKHSLPCTAHI
SVTPVNDETPVVTTNRGLKVWVSSVTEISTDDLSAEDSDTLSEWLEFIVTPPSNGHLALR
TAPSKHILNFTQSHIQSGQLVFVHSGAPAGGFHFQVNDGVNFAPRQIFSMTAHSLVLTLQ
RNHPMEVYPGSVTPITEQELQVVTDDVSDIRRNHSVVFAVTAPPKLGRLLRRMPDNSTQD
ISTFTQSMVNDGVVLYDQNNPESVGWSAADAFSFTVSSPPAFLPPHTFTILISYLANKHP
QHNTRLLNNAGAVVAEGGRVTIDRAKLDASNLLGKVPDQRRKDHHILYRVISPPRHGALS
MQGHNLTRDQPDFSQITLNKFGITYIHDDSETLSDSFTFQAWVAPLDLSSSSSSSSSSSS
SLSAFSSDSSSSPSSYSPLYSVSSPPLPSLEAVSDRRVKDSLAVTETFNITVTPVNDQPP
LIRSRTPGMKVVVGERVVLGSDYLHVEDHDNPPEELHYLLISKPNNGYLTLGERPEPVTS
FTQYDVNHGRLHFIQQGEASTGVFYFNVTDGHHRPLYKLFSLEVIKPSVSMVNNTGLSLL
QGRTAVVLTTNQLAAQTNGRSPANITYTVTMHPRHGRIAINDQEVTTFRHEDLQFGRVVY
HMTDLSESEDVFQVSVSASSPGVDYGNVTAQTVKVTVRPLVYLREPVRVPSGIAVKLGKA
MIDASELARISRADPVFEVLSPPKHGKLVKMTYDPNRASEVLKSFTFRDVVQGRVAIQET
LSDGDNQLQDNTSTLATAQGHTPARPLNDSFTFLVKAGNVQPAKGELHFTILPHHQMHHG
PTGVNKEDGASGKHTTEPMATQNRTTAGGRRGGGAGGSTTLSEVELGLHPHILSQKNHNR
TQPRLRPHGRWGNHTRSGSHGGRSGSAAEGAGRGHTHAAQPHTPFIADKHGPAIPPDANA
VHVEVLPRPASDPLLIILPLLACLLLIIILVVLILVFRRRKEKQARQRLLRELAAVVLPT
EDSPYLGRPERSVAMPSVVVTPLGPASCPTSPREPLSPRRRRSLAPGMTFWGPFDADGAG
GDGNIRRGSINQRNNVICRNAFPAVATGFKTSVSSRSPTLRDDQYWV
NT seq
7704 nt
NT seq
+upstream
nt +downstream
nt
atggggagttttgtggctgatgtgtttctgctgctgctgatttccacaggacaagttcac
ggagcgtcattctacggtgacggctacatccacctgcgaactgtgcaggcctccgttcag
aacctgctccatgtccgatttcgaacctccagtcaggcagggctgctttttttggcagca
ggtcacagagacttcctgctgctggaactgatctccggttttctgcaggtgcgtctggac
ctgggctcaggtgaacgtttcctacgtacagaaacgggcattcaccttaatgacctgggt
tggcactctatggagctgacccacgaccgccataatgtcaccatgaccgtggaccgcaac
tctcgcaccagcctccacatgccaggaccggatctggagctcactgtggaggatggactt
tttgttggcggggcagccggtctgaaccacccctacattctcaacatttcctctgggttt
agaggttgtgtggatgaagtggtgttcaacgaacataacctgctgtccggtttaaggcgg
tattctgggtacaagaaagtccacgaggtatctctaggctgtaatctgcagttttctgcc
acagaagaagatcctgtgagttttttcagctccaaagccttcatgtcactcccaccgtgg
gatgtaccacaggaaggtgtgtttgaatgtgaacttcacccctctgagagagaacaagat
ggcatagtcctgtacagctccaacaaccagggagggtttgttgctatagagatcctagat
ggtaacctagtggcgacaataggtaatggagagggaagtaaaactgagctgcgttctcta
acacatgtcaccaccaaccacacttggtaccccatccagctgcacctgctaccctacagc
ctggagctgaaggtagacaaggagttaatcaagggcaacctgggtccggagctccaggtc
atccagctcagagggccacttttcctcggaggactggatgaggaaacgcgggaagtggcg
cagcaagctgggttgctctctgcctcgtcttttaaaggctgcctccgagaaattagggtg
aacactcaaagaacgggcctccctcatgccgtcatcacaaaggacatcaccgtgggctgt
aagacgggacaagaccctgagatggggacgaccaacagcccaacagatcgccctgagttg
gttattacaacctcacaaccagtgaccatcaataagaggaccccgaacttcctgttgctg
agaaagctagaggtagcagagggaggccgagcaccgctggagcccaaacacatcaaggtg
aatctgaattttcgtaaactgggtctccatccttcccagttgcttttccgtattgaggag
cagcctgttcacggtcagctccggctcgacctccgccctgaccctgatgggacgctagaa
gaggtggggcaagagaggactatcaccataggaaccgaggaacacgacaggactttcagt
atgctcgacctgtggcagggacgtgtgatgtatgttcacagcggttcagaggaccagaat
gatttcttcatattctcaaccttctccagcaagaaggagcttcctgtgtttctgaagggc
aaacgtctgcatcggtttgacattagcatcagtcctgttaatgatgcacctgtgctcagc
ctcccagagggaaatattttcactctgctggagaagtccaaacgacagttgacaacagat
gtgctgagagtgtcggaccctgacagcagtcctgcagagctgatgttcagctcccttggc
gaactctacaccgaggccggacaccttcagcacgaggattacccagagagggccgttaac
ttgttctcattaaatgatctggaggaaggtaagatcagctttgtccactctggggtctcc
accaccaggctgccactccgggtcagcgacggggagaagtcaagcaacacagtagttttg
cggatcatggcggtggcactcgaacacaaactggtgaataacacaggattggaggtgaac
caatgcgaggcttccatcatcactaccaatcaccttgcagtacaagtaaatgtggctgat
caggcagtggaaatccgatatgacgtgatagagccacctcaatatggtgagctccagcgg
atgcactcaagtggcgactggaaatcgacgacctcgttctctcaaaaacttctagaaaaa
gaacggatccgatacctcagctcgtaccgtggccttcagacccagaacaacatcactgat
cagttcaaatgtaagatcagcatcggttccctggccaacgaggaggttgttgtccccatc
acggtgcgctggatccacttcaaggtcacgcgaagcaagatggaggtcagcggtgttctg
tcggctgtcgtcactcccgagaacctcaatgtagtttcaaagggggtcagactcagtgag
aacaacctctacttcagactccttacactaccaaagaaaggtcgactgctttttgacaac
aacgttctacaaaagaactcaaccttcagccagaagaatatcacagatggtttattgaag
tacgagctgttcaacaggctcctcgatgacacgagagacactttcagctttcaggtcttt
tcaacgcacgccaactcgacaagttacgacttcagaatcaacatcaaaactgagtcgacg
gccttcactgttgtaaacgaaggcctttcaataccggaaggtgagagtaaagttctcacc
aaagacatcctctttactcacacggcaagcaaccgggaagtgcagtacaacatcacagtg
agccccaagcatggacagatcagaaggatcaatctctccaactcaacgtccattaacgac
aacatcgcagtcttcacaaatcgggacattgcggaggagaggatcatgtacgttcatgat
gacagcgaaaccaagcaggattcttttacatttcaaatcctggtttataaaccgcgtaaa
caagccagcaagaaggaggatagaaacacggccgaacacaccttcaacatctctgtgcgg
ctcgtcaacgatcagagacctgtcagggtcgtggataaagttttccatgtggcccgcgat
ggccagaggttggtgacgttgagcgaccttcgctacagggacgacgattcggacttcgag
gatgagtggttggtgtatacacggagggggattcccatgggagagctggtgctggccagt
aatcccagtcacaaattgtacgagtttacacagcgggaccttgagcagaaaaaggtgttg
tttgtccacagaggagtgagtttcgggcgtttcgtgctttttgtatctgatgggaaacat
tatgtttcaacactgctggaggtgatggcccaggatccgtacctgcaagtggagaacaac
acgggcctcttgctccagcgaggtgggatctcaaccctgacctctgcaaacctcagcgtc
ttcagcaacctcgacatccgggacccacaagaggtgacgttcgaggtcttccttccccct
aaacgcggcgccctctgctttgccaatggaggttgcgacaccgtgaagagagcagatgca
atttcaatattcaccctgtgggatctggtggcggggcgcctggcataccaccacgatggc
agcagccaggaattgtccgactggttcaacgtgacggccaaagccagggagaagagcaac
gagaggcaaccggacagagggaggagggaggtgcacctggacattggagtgccggtaaaa
atctacctggagagtcatcagaggcagccaacggtcatgagtaaccgtgtggtggtggtg
gaggagggacagaatgtctccattaccagggagcatttagaggtgatccacgaggacagc
cagccctcagagatcatttttaccgtccagagtccccccacccttggttttttccacaag
tcctcccccattaacgagcaccagaataatggagaacagcagctctatcaggggaacaga
gaacaggagacgacctccttcacccaggacgacctgaaccagggattgatcgtgtatcat
cagcaggctgcaggaagcatcaacgactcggttctgttggaggcaaccaacggggtcaca
aaggtcggacccatcaggctggagatcgacatcattcctctcctgctccctctacaggtg
tctgacttgacccttgacgaggggtcatccctgccgctgacccctgacatcgtcaaggtt
gccaatcaccatttctcaggcatgaacttcctgtatcaagtcatcgttccaccacgacac
ggacacttggagcacagccggataccggggatgcccatcacggctttcacacacactgag
ttggaacgtgagtacatctccttcatccacgacggcagtgacacacagagcgacaacttc
accctcgtggccaatcagacagaaatcggcaagcacagtttgccctgcaccgcccacatc
agcgttacgccggttaacgatgagactcctgtcgttacaactaaccggggtctgaaggtg
tgggtgagttcggtgacagaaatcagcacagacgacctcagtgccgaggactctgacact
ctctctgagtggctggagttcatcgtcacgccgcccagcaacggccacctggctctgagg
accgccccgtccaagcacatcctgaacttcacccagagtcacatacagagtggacagctg
gtgtttgtgcacagcggtgcaccggctggcggcttccacttccaggtgaacgacggcgtt
aactttgcccctcgtcagatcttcagcatgactgcccactctctggtcctcactctgcag
agaaaccatccgatggaggtctacccaggttctgtgacaccaatcactgagcaggagctt
caggtggtaactgatgatgtcagcgatatcaggagaaaccactctgtggtgtttgcggtc
actgctcctcccaaactcggccgcctgctccgacgcatgcctgacaactctacgcaggac
atttctacgttcacgcaaagcatggtgaatgacggagtcgtcctgtatgatcagaacaac
ccggagtcggtgggatggtcggccgcagacgctttctctttcaccgtgtcctctcctcct
gctttcctgcctccacacaccttcaccatcttaatctcctacctcgctaacaaacatcct
caacacaacaccagactactgaacaacgcaggtgcggtggtggcggagggaggcagggtc
acgatcgacagggcgaaactcgatgcctccaatctcctggggaaagttcccgatcaacgc
cggaaagaccaccacatcctgtaccgtgtgatttctcctccacgtcacggggctctgtct
atgcaaggacataatctcaccagagaccaaccagatttctcacagatcaccctgaataag
ttcggcatcacatacatccacgacgactctgagactctgagtgacagcttcacattccag
gcttgggttgctcctctggatctctcctcctcctcctcttcctcctcctcctcctcatcg
tccctgtctgccttctcctctgattcctcctcttccccttcctcctattcccctctctat
tctgtatcatcgccccccctgccatcactcgaagcggtttctgatcgcagagtcaaggac
agcctggcggtgacggagacgttcaacatcacggtgacaccagtcaacgaccagccgcct
ctcatccggagcagaaccccggggatgaaggtggtggtcggagagagagtcgtactgggc
tcagactacctgcatgttgaggaccatgacaaccctccagaggagctgcactacctcctg
atcagtaaacccaacaacggctacctgacgctgggggagagaccagagcctgtgacctca
ttcacccagtacgacgtcaaccacggccgactgcatttcatacagcagggtgaggcatca
acaggagttttctacttcaatgtaaccgacggtcaccaccgcccgctctacaaactgttc
agcttggaggtgattaaaccctctgtctccatggtgaacaacaccggcctgtcattactt
caaggcaggaccgctgttgtcctgacaaccaaccagctggcagctcagaccaacggccgc
agcccggccaacatcacctacacggtcaccatgcaccctcgccacggacgcatcgccatc
aacgaccaggaggtgacgaccttccgccacgaggacctgcagtttggtcgagtcgtctat
cacatgaccgatctcagcgaatcagaggacgtcttccaggtctcagtgtcggcctcgtcg
cctggtgttgattatggaaatgtgacggcacagacggtgaaggtaactgtgcggcctctg
gtctacctgagggagccggtcagagtccccagtggcatcgctgtgaaactgggaaaagcc
atgatcgacgcctccgagctggcgaggatcagccgagccgacccggtgtttgaggttctg
tcgccaccaaaacatggaaaactagtcaagatgacctatgaccctaaccgagcatcagag
gtcctgaagtcgttcaccttcagggacgtggtgcaaggccgagtcgccatccaagagact
ctgagtgacggcgacaaccagctccaagataacacatcaacgctggcgaccgctcaaggc
cacacccccgccagacctctcaacgattccttcaccttcctcgtgaaggctggaaatgtc
caaccggcaaagggcgagcttcacttcaccatcttaccccaccaccagatgcatcacggt
ccgactggtgtaaataaagaagacggtgcaagtggcaaacacaccacagaaccgatggcg
acacagaacaggacgactgccggaggaaggagaggaggtggagcagggggatccacgacg
ctcagtgaagttgagctgggtttgcaccctcacatcctgtcccagaagaaccacaacagg
acacagcccaggttgaggcctcacggtcgctgggggaaccacacacgcagcgggagtcat
ggaggcaggtcagggagcgccgcggagggagcgggtaggggtcacactcatgctgctcaa
ccccacactcctttcatcgcagacaaacacgggccggcgatccctcccgacgccaacgca
gttcacgtcgaggtcctccctcgacccgcctccgaccccctcctcatcatcctgccgctg
ctggcctgtctgctcctcatcatcattctcgtggttctgattctggtgttccgccgccga
aaggagaaacaggcccggcagaggctcctccgggagctggccgcggtggtgttacccact
gaggacagtccttatctgggacggccggagcggagcgtggcgatgccatctgtggtggtc
accccgctcggccctgcaagctgccccacctcgccccgggagcccctaagtcccaggagg
aggaggagcctggcccctgggatgaccttctgggggccgtttgatgctgacggagcaggt
ggcgatgggaatattagacgtggttccattaatcaaagaaataatgtgatttgtcgtaat
gcattcccagctgttgctacaggattcaagacctctgtgagttctaggtcccccactctc
agagacgaccagtactgggtttga
DBGET
integrated database retrieval system
