Hippoglossus stenolepis (Pacific halibut): 118125405
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Entry
118125405 CDS
T08308
Symbol
cercam
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp00514
Other types of O-glycan biosynthesis
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118125405 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118125405 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118125405 (cercam)
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118125405 (cercam)
Glycosyltransferases [BR:
hsp01003
]
O-Glycan biosynthesis
O-linked Gal type
118125405 (cercam)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
118125405
NCBI-ProteinID:
XP_035039806
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All DBs
Position
18:complement(7558399..7567960)
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AA seq
591 aa
AA seq
DB search
MTLLLLALAALLLQADSYFSEEKYPEESKVQPPTVVIAIIARNAAHSLPFYLGALDRLNY
PKERITVWAATDHNTDNTTAMLKEWLTYTQKFYHYVEWRPMDQPTSYAGELGPKHWPNSR
YEYVMKLKQAALNFARKRWADYILYADTDNILTNPETLNLMIAENKSVIAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCFPVPMVHSTTLLDLRKEGMKNLAFFPPHQDY
SWPYDDIIVFAFSCRAEEIQMYLCNKERYGYLNVPAKPHHTLEDDRLNFVHVHLESMIDG
PPMKTSRFVHVFPKQRDLMGFDEIYLINLRRRQDRRDRMLFSLNELEIDVKVVDAVDGNA
LNSTDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYFIWKEMVDEQMDKALVLEDDVR
FQANFKRRVLRLLEELKQVELDWDIIYFGRKQVNPGSEKEVENVHNLVYAGYSYWTLSYA
ISLQGAQKLINAEPLSKMLPVDEFLPIMYDKHPNKVYKSNFANRNLQAFSTRPLVVQPCH
YAGDPDWVSDTETSTLWDDDSVRTDWRGSHKTLKGAAAAPEMLSAAYKDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgctcctgctggctttagcggccctgctcctccaggccgactcctacttctcc
gaggaaaagtatccggaggagtcgaaggtgcagcctcccaccgtggtgatcgcgatcatc
gcccgcaacgccgctcactcgctgcccttctacctcggagccctggacagactcaactac
cccaaggagcgcatcaccgtgtgggcggccacggatcacaacaccgacaacaccacagcc
atgttgaaagagtggctcacatacacgcagaagttttaccattatgtcgagtggagaccc
atggatcagcccacgtcctatgcaggagagctgggtcctaagcactggcccaacagcaga
tacgagtatgtgatgaagctgaagcaggcggcactgaactttgcccggaagcgctgggcc
gactacatcctgtacgctgacactgacaatatcctcaccaacccagaaacactcaacctg
atgatcgcagagaacaagtcggtcatcgctcccatgttggactctcagggagcctactcc
aactactggtgcggcatcactccgcagggatactatcgccgaacagccgagtatttcccc
acccgtcagcgtcacagactgggctgcttcccggtgcccatggtccactccaccacgctg
ctggatctaaggaaggagggcatgaagaacttggctttcttccctcctcaccaggactac
tcgtggccctacgacgacatcatcgtgttcgccttctcctgtcgagctgaagagatacag
atgtacctgtgcaacaaggagcgctacggctatctgaacgtcccggccaaacctcaccac
accctggaggatgatcgcctcaactttgtccacgtgcacctggagtccatgattgatggt
cctcccatgaaaacgtctcgctttgtccacgtgttccccaaacagagagacctcatgggc
tttgatgagatatatctgataaatctgcggcgtcgtcaggaccgcagagaccggatgctg
ttctcgctgaacgagctggagattgacgtcaaggtggtggatgctgtggatggaaatgca
ctgaacagcactgacattaagatcctgggtgttgacctgctaccgggctactacgacccg
ttctccggacgcaccctgaccaaaggagaggtgggctgcttcctcagccactacttcatc
tggaaggagatggtggacgagcagatggacaaagcgctggtcttggaagacgatgtccgt
ttccaggccaacttcaagcgacgggtcctcagactgttggaggagttgaagcaggtggaa
ctggactgggacatcatatactttggcaggaagcaggtgaatcctgggagcgagaaggag
gtggagaacgtccataacctggtgtacgccggctactcgtactggactctgtcttatgcc
atctccctgcaaggagcccagaaactgatcaacgcggaaccgctttccaagatgctgccc
gtggatgagttcctccccatcatgtatgacaagcatcccaataaggtctacaagtccaat
ttcgccaacagaaacctacaagccttcagtacacgccccctggtggtccagccgtgccac
tacgccggggatcccgactgggtgagcgacacagagacgtccacgctgtgggacgatgac
tctgtacgtacagattggaggggctcccacaagaccctgaaaggggcggcggcggctccc
gagatgctgtcagctgcctacaaggatgaactctag
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