Hippoglossus stenolepis (Pacific halibut): 118125519
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Entry
118125519 CDS
T08308
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118125519 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118125519 (hnrpkl)
Spliceosome [BR:
hsp03041
]
Common components
Common spliceosomal components
hnRNP proteins
118125519 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
118125519
NCBI-ProteinID:
XP_035040073
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All DBs
Position
18:13308130..13324660
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AA seq
432 aa
AA seq
DB search
MEVKMEQQDEDLTFSNTDTNSKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGDILLKIIPTLEEYQHYSGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVI
ECIKVILELVSEAPIKGRAQPYDPNFYDETYDYGGFTMLFEERGRRPIGGFPIRVRGGFE
RMPPVRGSRPLPPSRRDYDDMSPRRGPPPPLSRGGRGGSRARNLPLPPPPPPRGGGDRFS
HGSYHSSMDDRPTDRRSRGDRYDSMSGGGYDNNSSWEHFQSGGRGSYSDIGGPVITTQVT
IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQN
RSKSALKLNTGL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaaatggagcagcaggacgaagacctcacattcagcaacactgacactaat
agtaaacgcccggctgaggacatggatgaggagcaggccttcaaacgatcacgcaacaca
gatgagatggtggagctgcgtgtgctgcttcagagcaaaaatgctggtgctgtcattgga
aagggtggaaagaacataaaagctctacgcactgactacaatgccagtgtatcagtccca
gacagcagtggcccagagcggattctgagtgtgaacgccagcatcgacactattggagat
attctgctgaaaatcataccaactctagaggagtaccaacattacagcgggattgacttt
gactgtgagcttcgcctgctgatccatcagagcctggcagggggcatcattggggtgaaa
ggtgccaagataaaggagctgagagagaacacccagaccaccatcaagttgttccaggaa
tgctgtccacactccactgacagggtcgtcttggtgggaggaaaaccagaacgcgtcatt
gaatgtataaaagttatcctggagctggtgtcagaggctccaatcaaaggtcgtgctcag
ccttatgaccctaacttctatgacgagacatatgattatggaggtttcactatgttattt
gaggaaagaggcagacgacccattggtgggttccctattcgcgtgcgtggaggctttgag
cgaatgccccccgttcgtggcagcagacccttgcctccctccagaagggactacgacgac
atgagccctcgtcggggtcctccaccacctctgagccgaggtggacgaggcggcagccga
gctcgtaacctgcctcttcccccgcctccaccaccaagaggagggggagacaggttttca
catggcagctaccacagcagcatggacgacaggccaaccgacaggaggagccgaggagac
cgttatgacagcatgagcggaggcggatatgacaacaattcttcctgggagcactttcag
tctggtggcagagggtcatacagtgatattggaggcccagtcatcacgacacaagtcacc
atcccaaaagatctggctggctctatcattggaaagggcggccagaggatcaagcagatc
cgccacgagtctggggcatccatcaagattgatgaaccactagagggctctgaggaccgc
atcatcaccatcacaggaacacaggaccagatccagaacgcccagtacctgctgcagaac
agatcaaaatcagctctaaaactgaacaccggcctgtaa
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