Hippoglossus stenolepis (Pacific halibut): 118125555
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Entry
118125555 CDS
T08308
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118125555 (ttc28)
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
118125555 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_17
TPR_16
Rapsyn_N
TPR_11
RPN7
TPR_NPHP3
TPR_14
TPR_6
TPR_9
PUB
TPR_19
Motif
Other DBs
NCBI-GeneID:
118125555
NCBI-ProteinID:
XP_035040154
LinkDB
All DBs
Position
18:18436805..18571910
Genome browser
AA seq
2564 aa
AA seq
DB search
MEKQRTRKEKFSLFGSRSTSRTNPPSSSSSSSSPVIPSAATLKRAERPTGCSPSGLSKAE
FLERVRRSNQACQQGEYELAVRLYSEALTADPQNCILYSNRSAAYLRLGQYSTALDDAVK
ARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRD
SLEPTYQQLQKMKLDKSPFVVVSVIGQELLTHGFHGASVVVLEAGLKIGTCSLKLRGSVF
SALSSAYWSLGNAEKSVAYMQQDLEVTKTLGDQSGECRAHGNLGSALFSRGSYREALANH
RNQLVLAMKLKDREAASDALSSLGHVYTAIGDYPNALASHKQCVLLARQTQCQLSEARQL
GNMGAVYTALGDFTNAVQCHEQHLDIAKTLENRREEARAYSNLGSAYHSQRDFDKAISYH
TRVLELAQEQADRAIEMRAYAGLGHAARCMQDLERALQHHQHQLEIAQELQDRAAQGRAS
SNLGIIHQMKGEYETALKLHKAHLSLAQELGDYAAQGRAYGNMGNAYHALGIYDQAVRFH
RQELQMSLEVNDRPSQASTHGNLAVAYQALGAHDRALQHYLHHLTIARELRDTQSEARAL
ANLGNFHSWRGEYAQALPYYQQYLALAPGLQDLEGEGKVCHNLGYAHYCLGQYRDAVRYY
EQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYNKAEECQRYLLSLAQALDNTQAVFRAF
GNLGDVCVCRGDLPGAVRFYQQQLTLAQKVSDQKMEADAYSALGSVHRLLRQLDTALSFH
SQELTVRKDIGDQQGECRALGHLAAVHMALGDYATTFQCYETQLGLAQGLRDARLEAQVH
GNMGITKMNMGVFEESIGYFEQQLAMLEQLSGTESMLDRGRAYGNLADCYDALGDYEEAI
QYYEKYLTVAQSLNHVQDQEKAYRGLGNSYRSIGSLQQGLVCFEKRLVAAHELGGEGGGK
AQAYGELGTLHSQLGNYEQALSCLEHQLNIARTAGDKSLEAEASDTLGGVYQLMADNETA
LQWHQRALDIAEQTRCVGSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLMSK
TLAYGSLGRIHHALQNYAQAVMYLQEGLRLAEQLGRREDEAKIRHHLGLSLWASGNLEEA
QHQLYRASVLFEMIRHETQHSTDYKLSLFDLQTSSYQALQRVLVSLGRHDEALAIAERGR
TRAFADLLVERQKGSQQAACSDPYIPVTVEHILETVNSQRAMVLYYSLAGGFLYSWLISP
GTGIVKFNEVYLGDPEADGGGSPQDGGGGAGASPLSLDQHIYNAREALGVDSHYSRVGSS
SETESEAGDLLEQQFEELNTSATDPTGYLRMVSRNNLFNRSCRSMTSLYSATVSPGKDSL
SSPPCRLSNISKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLK
GSSSNEYLYERFSLISVPSLASLGATIKPHQRRGGPSLCTDGGSVAAVVGAPRLPPSVMD
RWLWGPLPSAQDEALWLGEQLGCHPLTGANATKERVLAALSQAECVHFATHISWKLAAVV
LSPSQEHAGGEGTGSRPKEKSLCGALTSGQPVDQDAEVKGSFSKKHSSPEGLRAADEASE
DEDSVCDVESVCDSPSLQDFLLTAADILGLCLTVKLVVLRLYPESSSRVTADGVVGLTRA
FLAAGVQCVCVSLWPAPIAASKLLTHTFYTALLNGTKASAALTEAMKTLQSSKHFSHPSN
WAGYMLIGNDVKLNSPMSLVGQALAEILQYPDRARDALRVLLHLIEKSLQRIQSGQCNPM
YTSQQSVENKVGGVPGWQALLSAVGFRLDFSGSVAGLSSAVFFPQSDPGDRLQQCSTTLQ
ALLGLTPPALQALCKLVTASEAGEQLIHKAVKSMVGMLHQVLVQLQSGDKEQDFSLAPIQ
VSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRTMHFALQSLLALFDSTE
LPKRLSMDSSSSLESLSSSQSASQPHSLPLSFGCYPPQPSFLPPVCPDNLSCDAISVYSL
SSLASSLSFLSRPEPAGSDTISQRLHQQEPDRSRVGTGLYASLRPSGGLSRGRLPNHGGA
AGEGEDEEYEGYSIISSEPLGRGGRDCDTLPLPAGHRHGRGGAGRGSNGGHRYPITISSK
GSISTPTSPIKAPPLPPTVSSNPKLRQEISSPQRTRKGKVSSSESDQSSTETDSTVKSQE
ERMGPAGQMDPQELAQKILEETQSHMQAVESLQKANMRGKTLTGPEGREEAHARQPSHST
PTTPTLTPTGGARGFQPSETSAFSRPPSRASLKACSSPLSLPRHRSPLSTSVSTPPATRP
KPPSRSSSLQKISSGYNSPAHSSSSLSLSGKEQGSPSSMASPDVHALAQLKLKYPPSPYS
AHISPSRSPADSAPSPALSYSSTGSVSGSSSPANTPELNQSKHDNKVQAVHNLKTFWANA
SQKHEVPCPASFLRGGNKRMSTVQKDVLGLLNLSPNRESLSKNVEGSEDQNSDNRPNGHQ
KLEAKPPPPPAATVPTNSKGGSRLPSGNGFKFLSPGHFFPSSKC
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaaggacgaggaaagagaagttctccctgtttggttctcgctccaccagc
aggaccaaccctccttcttcatcctcctcctcttcgtcccctgtgataccttcagcggca
acactgaaaagagcggaacgaccaacgggctgcagcccctccggcctgagcaaagccgaa
tttctggagcgcgtgcgtcgcagtaaccaggcgtgccaacagggggagtatgagctggct
gtgcgtctgtacagcgaggccctgaccgctgacccccagaactgtatcctctacagtaac
cgctcggcggcctatctccgactgggtcagtacagcactgctctggatgacgcagtcaaa
gctcgtctcatcaaccccaaatggcccaaggcctactttcgtcagggggttgccctgcag
tacctgggtcgtcatgccgacgccctggcagcattcgcctccggcctcgcccaagacccc
aagagtctccagctgctggtcggcatggtggaggctgccatgaaatctcccctcagagac
tcccttgagcccacctaccagcagctgcagaaaatgaagctggacaagagccctttcgtg
gtcgtgtccgtcatcggtcaggagctgctgacccacggtttccacggggcctctgtcgtg
gtgctggaggcggggctgaagatcggcacgtgctccctgaagctgcgtggatctgtcttc
tcggccctgagctctgcctactggtctttaggcaacgcagagaagagtgtggcctacatg
cagcaggacctggaggtgaccaagactttaggtgaccagtcaggtgaatgccgcgcccat
gggaaccttggctctgctctcttctccagaggcagttacagagaagcactggccaaccac
aggaaccagctggttctggccatgaagctcaaggacagagaagctgcgtctgatgctctc
agcagtctgggccatgtgtacacagctatcggcgactaccccaacgcactggcaagccat
aaacagtgtgtgctgttggcgcgacagacccagtgtcagctctccgaggctcgccagctc
ggcaacatgggcgccgtgtacaccgcactgggagacttcaccaacgccgttcagtgtcat
gaacaacacctggatatcgcaaagactttggagaatcggcgggaggaagcacgggcatac
agcaacctgggcagtgcctaccactctcaacgagactttgacaaggccatatcataccac
acaagagtgctggagctggcacaggagcaggccgacagagccatcgagatgagggcatat
gctggtctggggcacgctgcccggtgcatgcaggacctggagcgggcacttcagcaccac
caacatcagctagaaattgctcaggagctgcaggacagagctgcacagggcagagcatct
tccaacctgggcatcatacaccagatgaagggggagtatgaaacagcattgaagctccac
aaagcccacctgtccctcgcccaggagctgggggattatgctgcccaggggagggcctac
ggaaacatgggcaacgcctaccacgcactcggcatctacgaccaagctgtccgcttccac
cgacaggagctacagatgtcactggaggtgaacgatcgtccgtcgcaggcctccacacat
ggcaacctagcggtggcgtaccaggcactgggcgctcacgaccgggctctccagcactac
cttcaccacctgaccatcgcgcgagagcttcgagacacacaaagcgaagcaagagcacta
gcaaacctgggcaacttccacagctggagaggtgagtatgctcaggccttgccttactac
cagcagtacctggctctggccccaggcttacaggatctggagggagaaggcaaagtctgc
cacaacctcggctatgctcactactgcctggggcagtacagagacgctgtcaggtattac
gagcaggacctggccttggctaaggacctccaagacaaattagcccaggctaaagcctac
tgtaacctgggcctggcccacaaagcactgggggagtacaacaaagcagaggagtgtcag
agatacctgctctctctagcacaagccctggataacacacaggcggttttccgggcgttt
gggaaccttggcgatgtctgcgtgtgtcggggtgatcttccaggagctgtgaggttctac
cagcagcagttaaccctggctcagaaagtcagtgaccagaagatggaggctgacgcctac
tcagcacttggctcagttcacaggctgctccggcagttggatacagcattgtccttccat
agccaggaactgaccgtccggaaggatataggtgatcagcagggggagtgccgcgccctc
ggccacctggcagcagtgcacatggccctgggagactacgctacaaccttccagtgttat
gagacccagctgggcttggctcaggggctcagggatgcccgtctggaggcccaggtccac
gggaacatgggcatcaccaaaatgaacatgggagtgtttgaggaatcgatcggctatttc
gagcagcagctggctatgctggagcagctgagtggaactgagagtatgttggacagaggt
agggcctatgggaatctggcagactgctatgatgccctgggagactatgaggaggctatt
cagtactacgagaagtacctgactgtggctcagagtctcaaccacgtccaggaccaggag
aaagcctacagaggacttggcaattcatacaggtctattggtagtctccagcagggactg
gtgtgttttgagaagcggctggtggcagcccatgagctgggcggggaaggagggggtaag
gctcaggcttatggggagctgggcaccttacacagccagctgggcaactacgagcaggcc
ctctcctgcctggagcaccagcttaacattgcacgcacagcaggggataaatccctggaa
gcagaggcaagcgatactcttggaggcgtttatcagctgatggcagacaacgagacagcg
ctacagtggcaccaaagggcgttggatatagcagagcagacgagatgcgtggggagccag
ggtcgagcctacggcaacttgggactgacctacgaggctctcgggaactatgagcgggcc
gtggtctttcaggagcagcacctgagtgtggcagcacagaccaatgacctgatgtctaaa
actctggcctacgggagcctggggaggatacaccatgcactgcaaaactatgcacaggct
gtgatgtacctgcaggaaggtctgcgtctggccgagcagttaggtcgcagagaagacgaa
gctaagatacgccaccacctgggtctgtccctgtgggccagcggaaacctggaagaggca
cagcaccagttatacagagcatcagtcttatttgagatgattcgtcatgagacacagcac
agcacggattacaagctctcgctgtttgacctgcaaaccagctcgtaccaggctctccag
cgagtcctcgtcagcctaggtcggcacgatgaggctctggccattgcagagcgagggcgt
acacgtgcctttgccgatctcctggtcgagcgccagaaaggaagtcagcaagcagcgtgc
agcgacccttacatcccagttactgtggagcacatcctggagacagttaacagtcagagg
gcaatggtcctgtactattctctggctggaggctttctgtacagctggctgatatctccg
ggaacaggtatcgtgaagtttaacgaggtgtatcttggagatcccgaggcggatggcggt
gggagcccacaggatggaggaggaggagcaggtgcaagtcctctgtctctagaccagcac
atctacaacgccagagaggctctgggagtggacagccattacagcagagttggctccagc
agtgagacagagagtgaagccggggatctgttagagcagcagtttgaggagctgaacacc
tcggccaccgaccccacaggctacctccgcatggtgtccagaaacaacctcttcaacaga
agctgtcgcagcatgaccagcctatacagtgccacagtgtctccagggaaagacagcttg
tcctctcctccttgtcgattgagtaacatcagcaaacctcctctccgagccctttatgac
ttactcatagcacccatggaaggcggcctgatgcacagtagtggacctgtgggcagacac
agacagctcatattagtgttggagggagaattgtacctgatcccattcgccttgctcaaa
ggcagctcctctaatgagtacctgtatgagaggttcagtctcatttctgtaccttcttta
gccagcctgggagccacaatcaagcctcatcaacgtagaggcggaccctcactttgcaca
gatggaggttcagtggctgcagtggtcggagctcctcgcctgccccccagcgtgatggac
cgctggttgtggggtcccctgccttcagcccaagatgaagctctttggttgggggaacag
cttggatgtcatccactgaccggggcgaatgccacaaaggagcgtgtgctcgcagcactg
agtcaggcagagtgcgttcactttgcgactcatatatcttggaagctcgcggccgtggtc
ctctctcccagccaagagcatgctgggggagagggcacaggaagccgacccaaggagaaa
tcactgtgtggggccttgacctcaggccagcctgtggatcaggatgcagaggtcaagggt
tcgttttcaaagaagcacagcagcccagagggactcagggcggcagatgaagcgagcgag
gatgaggacagtgtgtgtgatgtggagagtgtgtgtgacagtccatcacttcaagacttc
ctcctcactgctgctgatatactgggcctgtgcttaaccgtcaaactggtggttctgagg
ttgtacccggagtccagcagcagggtgacagctgacggggtggtgggtctgacccgggcc
ttcttagctgcgggtgtccagtgtgtgtgtgtctccttgtggcctgcaccgatagctgcc
tccaaactgttaacacacaccttctatacagcacttctcaacggcaccaaagccagtgct
gctctgacggaggccatgaagacactgcagagcagcaagcacttctcacacccctccaac
tgggctggttacatgttgattggaaatgatgtgaagctgaacagccccatgtcgctggtg
ggccaagccctggcagagatcctgcagtacccagacagagccagggatgccctcagagtg
ctgttacacttgattgagaagtctttgcagcgcattcagagtggccagtgtaacccaatg
tacacatcccagcaaagcgtggagaataaggtcggcggggtgcccgggtggcaggccctc
ctgtctgcggtgggtttccggttggacttctccggtagcgtcgcaggactctcctcggcg
gtgttcttcccccagtcagaccctggagatcggctgcagcagtgcagcaccactttacag
gccctgcttggtctgactcctccagctctgcaggccctctgtaagcttgtcacagcgtct
gaggccggagaacagctcattcacaaggccgttaaaagcatggtgggaatgcttcaccaa
gtgttggtgcagttgcagtctggcgacaaagagcaggacttctcactggctcccattcaa
gtgtccataagtgtgcagctctggaggctcccgggctgccacgagtttctagcagcactc
ggcttcgatctttgtgaggtgggtcaggaggaggtcgtgctgaagactggaaaacaggcc
agcagacgcaccatgcattttgctcttcagtccctcctggcgctttttgactccacagag
cttcccaagcgactgagcatggacagctcttcctccctggagtccctgtcgtcctcccag
tccgcctcccagcctcactctttacccctctctttcggttgctacccacctcagccctcc
ttcctgcccccagtctgcccggacaacctctcctgcgatgccatctctgtctacagcctc
agctccctcgcctcctctctcagtttcttgtccagaccagagcccgcaggaagtgacacc
atcagtcagcgcttgcatcaacaggagccagacagatctcgtgtggggacaggcctctac
gcctccctccgtccttcaggcggcctctcaagaggtcgactccccaatcatggaggagca
gcaggagaaggggaagacgaggagtatgagggatactccattataagcagtgagccgtta
ggacgaggagggagggactgtgacacgctgccacttcctgcaggacacagacatggcaga
ggcggagcagggagaggatctaatggaggtcataggtatcctatcacgatttcttccaag
ggaagcatcagcacacctacatcccccattaaagctccaccgctgcccccaactgtttcc
tccaaccccaagctcaggcaggaaatctcatctcctcagaggacaaggaaagggaaggtt
agcagctctgagtcggaccagtcgagtactgagacagacagcacggtcaagtcccaggag
gagaggatggggcctgcgggacaaatggatccacaggaactggcccagaagatcctggag
gagacccagagccacatgcaagcagtggagagcctacagaaggcaaacatgagagggaag
acactgacggggcctgaggggagagaggaggcacatgccagacagccatctcactctact
cccacaacgccaactttgactcccactgggggagcacgtgggtttcagccctcagagacc
agtgcatttagcaggccacccagtagagcaagtctaaaagcttgctcgtctcctctttct
cttcctcgacatcgttcgcccctctccacttctgtctcaacacctcccgcgactcggcct
aaaccaccctcacgctcgtcttcgctacagaaaatcagctcaggctacaacagtccagct
cattcgtcttcgtccttatctctctctggaaaagagcagggttcgccttcctccatggct
tcccctgatgtgcatgcgctggctcagctcaaactgaaataccctccctcgccttactcc
gcccacatctcaccttcccgctctccggccgacagtgccccatcgccagctctttcctac
tcctccacaggatctgtttcaggctcttccagcccggccaacacccctgaactgaaccag
tcaaaacacgacaacaaagtccaggcagttcataacttgaaaaccttctgggccaacgcc
agccagaagcacgaggtgccctgccctgccagttttctccgggggggaaataaaagaatg
agtacagttcagaaagatgttctgggtttgctgaatctgtcacctaaccgcgagtctcta
agcaaaaacgtagaaggatccgaggatcagaactctgacaacagaccaaatggtcaccaa
aaactggaggctaaaccacccccacctccagctgctactgttcccacaaactctaaagga
ggcagcagacttccctctgggaatggcttcaagtttctctcacctggacatttttttccg
tcttctaaatgttga
DBGET
integrated database retrieval system
