Hippoglossus stenolepis (Pacific halibut): 118125572
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Entry
118125572 CDS
T08308
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118125572 (rnf180b)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118125572 (rnf180b)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118125572 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Siva
zf-C3HC4_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118125572
NCBI-ProteinID:
XP_035040175
LinkDB
All DBs
Position
18:2174122..2179264
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AA seq
517 aa
AA seq
DB search
MLRCRRCRKGVIDSTCLSPEEATEESSGAICSIWHVNVDALPDWILTSVHQAQWTVGKLN
CHNCSARLGGFNFINHTKCPCGQDATVHLNKSRVDRDHKHHVLIVQPRRTRPEKGRAAPP
TDSAENNAETFNGTEPDSLQVYCAAVTSHIRPEEASSSPSENQSFPFSPLYCISHRRRGS
LEDGATFRSSCFCPASLMDRSAAGLTWAGPDDESTWSPVSCPTRQDADGEASGDADAFGS
LGGRRLLLDQPLLPTVDTVESSVATTTSHEDASDSTLFLRGRTVSDSVAERDEETEPRAS
SASPASISRRRKERNRLKGLRRKQRRRERWLHRWQEQAESLSRSLVDSEEEDREGLTCAV
CLDVFFSPYSCQPCAHVFCEPCLRTLAKNRHTNTPCPLCRTLISHTDLHEELNQTVKTFF
PKVYYGRQLNFKKAPCAKWPLPSCRSCFRTFWGYQRHVATVRGRWHFAHGAFPLDALNFT
DMRGWLFDVGLFVDYVRSVNWILAFLLLCFLVYFFFF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctgcaggaggtgtcgcaaaggtgtgatagactcaacatgtttgtccccggag
gaggcgacagaggagagctcgggtgctatttgcagtatttggcacgtgaacgttgacgcg
ctgccggactggatcctgacctcagttcaccaggcccagtggactgtggggaaactgaac
tgccacaactgcagcgctcgtttgggcggcttcaacttcatcaaccacactaagtgtccc
tgtggccaggacgccaccgtccacctcaacaaaagccgcgtggatcgtgaccacaagcac
cacgtcctcatcgtccagccgaggaggacgaggcctgagaagggacgtgctgctccgccg
acagacagcgccgagaacaacgcggagacgtttaacgggacagaaccggacagtttacag
gtctactgtgccgccgtcacgtcccacatccgccctgaagaggcgtcgagttcaccgagt
gaaaaccagtcgtttcccttcagtcctctgtactgcatctctcacaggagaaggggcagt
ttggaggatggcgccaccttcaggtcgtcttgtttttgccctgcgagcctcatggacagg
tctgcggctggtttgacgtgggcggggccagatgatgagtcgacgtggtcacctgtctcg
tgtcccacgcgtcaggacgcggacggtgaagcctcaggcgacgctgacgccttcggttca
cttggagggaggcggttgctcctggatcaaccgctgctgccaactgtggacacggtggag
tcgtctgtggcgaccacgaccagccacgaagacgcttctgactcaaccctgttcctcaga
ggaagaaccgtctccgacagtgtagctgagcgggacgaggaaacggagcctcgagcctct
tccgcctccccagcctcgatcagccggagaagaaaagagaggaaccgtctgaagggtctg
cgacggaaacagaggaggagagagcgctggctgcaccgatggcaggagcaggccgagagt
ttgagcaggtccctggtggacagcgaggaggaagaccgagagggtctgacctgcgccgtg
tgtctcgacgtcttcttcagcccgtacagctgccagccctgcgctcacgtcttctgtgag
ccgtgtcttcgcacgcttgccaagaaccgacacacgaacacgccctgccctctctgccgc
accctcatctcgcacaccgacttacacgaagagctcaaccagacggtgaagaccttcttc
cctaaagtttactacggccgccagctgaacttcaagaaggctccgtgcgcaaagtggccg
ctgcccagctgtcgctcatgcttccgtaccttctgggggtatcagagacacgtagccacg
gtgaggggacgctggcacttcgcccacggagccttcccgctggacgccctgaacttcacc
gacatgcgcggctggctcttcgacgtcggcctcttcgtcgactacgtccgctccgtcaac
tggatcctggctttcctgctcctctgcttcctcgtgtactttttcttcttttga
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