Hippoglossus stenolepis (Pacific halibut): 118125577
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Entry
118125577 CDS
T08308
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118125577 (cacna1bb)
04020 Calcium signaling pathway
118125577 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118125577 (cacna1bb)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118125577 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
118125577
NCBI-ProteinID:
XP_035040190
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All DBs
Position
18:2664742..2757272
Genome browser
AA seq
2421 aa
AA seq
DB search
MPRFAEDLPSRYGGGAGGGGGGGGRGGPGAGRGGARGGGAGGGGAPGGQRMYKQSMAQRA
RTMAIYNPNPVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLA
LEQHLPASDKTPLSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVV
VLTGILATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFA
IVMFAIIGVEFYMGKFHTTCFRVDTGEKAVEWPCGLEPPARTCPNGTECREYWTGPNFGI
TNFDNILFAVLTVFQCITMEGWVEILYSTNDVAGNTWNWLYFIPLIIIGSFFMLNLVLGV
LSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEEEIAEEKSPLD
GAWYKRKQNLPVLKRGKVKKGKNDLIGAEEGEDPFADISSVAPPGSPFGRASVKSGGKMD
SSSYFRRKEKRIRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPDWLTRALYTAEF
VFLGLFLSEMTLKMYGLGARNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASFGISVLRA
LRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEK
ETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYT
LLNVFLAIAVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAAFVK
QNRDALSRRSSINSIQSLKEQQRSAKSMSVWEQRTNQLRRHNVRSSTEALFNELDPEERL
RMSSALHLHPDMKTHLDRPLVVEARNGDKPSRPPEGGGRDEAGSPRQDGTGDNFHAHPRK
HHRHRDRNGDGGDGRGGRHHTHHSRSRDHKADQTKERRAERSHSHEGGQGHRHHHQAGSP
EEENNDMQGGGEERGHRHHHSHRPPKEGNGTIANGAQGERKGRGGGGGGGGGGGGDSNGE
RKGRCSRMVRAQSTMDGDDCKRNRNGARGHREKQPDAEDSGLASSPLQLMHSSLSLGEKQ
EDADNQKNSTRASQAGLNSSNAIHIPVTVTSPPGETAIIPMNSIDCDNVQISDEKKDLEE
EEAANGPRQILPYSSMFVFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAEDPVQ
ANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAF
ACSSLMGSQQSVARGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVL
NILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLDYGRDGVAAQPREWKK
YEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDQGPSPGFRMETSIFYVVYFVVF
PFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPANKLSFQYK
MWKFVVSPPFEYAIMTLIALNTVVLMMKFYGAPDLYESMLKYLNILFTALFTLECILKII
AFGPLNYLKAAWNVFDFVTVLGSITDILVTEVKTDKMINLSFLRLFRAARLIKLLRQGYT
IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAIDHHNNFQTFFQA
LTLLFRSATGEAWHEIMLSCLSNRPCDRLSGTVGKECGSDFAYFYFVSFIFLCSFLMLNL
FVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRTCYQDMYKLLRFISPPLGL
GKKCPNRVAYKRLVRMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDADLKR
ELNRVWPNLSQKTVDVLVTPHKYNELTVGKVYAAFMIFDYYKQNRAKRLQQQQHPAGGAQ
SKMGTLFRPVLPLTHIQEVEPRICSPKQPLPPQPEPERTPEAPPITAITTATSATSINRD
AILNQRSGIKHSQSGDVSQAAPRPRGLRKLQRGQSEDVPYYTRPQELVELKQVEDLSDSE
GYPSLEGHYRAASLPRLNAEYYRSHPRHAPGTHLAPIVDLSPIRRSASSLTPQLYHEDGL
SEYDLERLGLAQASTGQDRAHHHHHHHRCHRRRDKDKDKKQKSLDRTASVQPSSTVDSFT
DPSAEGLSRERARERDRSRPHERRHHSSAGEKQRYYSCERYGSREQCHARSAGPSRSTSP
GEGQDAGLLKQYGSNVGKAGAGTLPSGSSTPGRSRRQLPQTPLTPRPAVTYKTANSSPLP
SGASNSTKGHQTRFSRGLSEHDRLYVDHNESPIPVTRIGSDPYLNRQLQDASRQALLEER
EDLQDPVSSHGSGARSARTTASTTASASHGTAAAAGTMPVTQARAAVVPNGFHFTLGVSS
VSGPGSRGTGSLREREDEDWC
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcttcgcagaagacctccccagccgctatggaggaggcgcgggcggcggcggc
ggaggaggagggagaggaggaccgggcgcggggagagggggagcccggggcggcggtgcc
ggcggcggaggcgcaccgggcggccagaggatgtacaagcagtcgatggcgcagagagcc
cggactatggccatttacaacccgaaccctgtcaaacagaactgcttcacggtcaaccgc
tccctgttcatcttccgggaggacaacctcatcaggaagtacgccaagcgcatcacggag
tggcctccatttgaatacatgatcctggccacgatcatcgccaactgcatcgtcctggcc
ctggagcagcatctaccggccagcgacaaaacgcccctgtccgagcgtctggatgacaca
gagccctactttattggaatattctgtttcgaggccgccattaagatcatcgccctgggc
ttcgcgttccacaaaggctcctacctccgcaacggctggaatgtaatggacttcgtggtg
gtcctcacgggaatcttggccacggtgggttcagacttcgacctgaggacgctgcgggcg
gtccgagtgctgagacccctgaaactcgtatcaggaatcccaagtctccaggtggtcctg
aagtccataatgaaagccatggttcctctgcttcagatcggcctgctgctcttcttcgcc
atcgtcatgttcgccatcatcggggtggagttctacatgggcaagttccacaccacctgc
ttcagggtcgacactggtgagaaagcagtggaatggccgtgtggcctggagcctccggcc
aggacgtgtcccaacggcaccgagtgcagggagtactggaccggacccaacttcggcatc
accaacttcgacaacatcctgttcgcggtgctcaccgtgttccagtgcatcaccatggag
ggctgggtggagatcctctacagcaccaacgatgtggcaggaaacacctggaactggctg
tacttcatccctctcatcatcatcgggtctttcttcatgctcaacctggtgctcggtgtc
ctgtcaggagaatttgccaaagaaagagagcgtgtggagaagaggcaggagttcctgaag
ctccggaggcagcagcagatcgagcgggagctgaccggatacttggagtggatctgcaaa
gcggaggaggtgttgctggaggaggaggaggagatcgcagaggagaagtctccgctggac
ggtgcgtggtacaagaggaaacaaaacctgccagttctgaaacgaggcaaagtcaagaaa
ggtaaaaacgacctgatcggtgccgaggagggggaggatcctttcgccgacatctcctcc
gtcgctcctcccggctctccgttcggccgagccagcgtgaagagcggcggcaagatggac
agctcctcgtacttccgccgcaaggagaagaggatccgcttcttcatccgacgcatggtg
aaggcccagagcttctactggatcgtcctgtgtctggtggggctcaacacgctgtgtgtg
gccatcgtgcactacgaccaacccgactggctcaccagggccctgtacacagcagagttt
gtgttcctgggtttgttcctgagtgagatgaccttgaagatgtatggcctcggagcacgg
aactatttccattcctccttcaactgctttgatttcggggtgatcgtgggaagtatcttc
gaggtgatctgggacatgatcaaacccggagcgtcgtttgggatcagcgtgttgagagcc
ctgcggctgctccggatattcaaagtcaccaaatactggaactcgctgaggaacctggtg
gtttccctcctgaattccatgaagtccatcatcagcttgctcttcctcctcttcctcttc
atcgtggtcttcgctctgctgggcatgcagctctttggaggacagtttaactttgaaaag
gagacgccgacaacgaactttgatacgttcccagccgccatcctcactgtgttccagatt
ctgaccggcgaggactggaacgccgtcatgtaccacgggatcgagtctcagggaggcgtg
cggcgcggcatgttctcgtccgtctacttcatcgtcctcacgctgtttggaaactacacc
ctcctgaacgtcttcttggccatcgccgtcgacaacctcgccaacgcgcaggagctgacg
aaggatgaagaggagcaggaggaggcggccaacaagaagctcgccctgcagaaagctctg
gaggtgaaggaggtcagcccgatgtcggcggccaacatctccatcgctgcttttgtaaag
caaaatcgagatgcactctctcgcaggtcgtccatcaacagcattcagtcactcaaggag
cagcagcgctcagccaagagcatgtcggtgtgggagcagaggaccaatcagctgaggaga
cacaacgtcaggtcgagcaccgaggccctgttcaacgagctggaccccgaggagcgcctc
cgcatgtcctccgccctgcacctccacccggacatgaagacccacctggaccggccgctg
gtggtggaggccaggaacggcgacaagcccagcaggcctcccgaaggagggggacgggat
gaggcggggagtccccggcaggacgggacgggagacaacttccacgctcaccccaggaag
catcaccgccaccgcgacagaaacggcgacgggggcgacggcaggggggggcggcaccac
acccatcacagcaggagcagggaccacaaggccgaccagacgaaagagaggagggcggag
aggagccacagccacgagggggggcagggacacaggcaccaccaccaggccggctccccc
gaggaggagaacaatgacatgcagggaggaggagaggaaagagggcatcgccatcaccat
tcccatcgtccacccaaagaggggaacgggacgatagcgaacggagcacagggagagcgg
aagggccgaggaggaggaggaggaggaggaggaggaggaggaggagatagtaatggagag
aggaaggggcgctgctctcggatggtcagagctcagtcgacaatggatggagacgactgc
aagaggaacagaaacggagcccgaggccacagagagaagcagccagatgccgaggacagc
ggcctcgcctccagtcccctgcagctcatgcacagcagcctgagtctgggggagaagcaa
gaggacgccgacaaccagaagaactccaccagggcgagtcaggcgggcctcaacagcagc
aacgccatccacatccccgtcaccgtcacatcgccgcccggggagaccgccatcattccc
atgaacagcatcgactgtgacaacgttcaaatcagcgacgagaagaaagatctggaggaa
gaggaggcggctaatgggcctcggcagatcctcccctacagctccatgttcgtcttcggg
caaacgaatccggtgcggcggctgtgtcactacgtggtcaacctgcgctacttcgagatg
tgcatcctgatggtcatcaccatgagcagcatcgctctggcagccgaggacccggtgcag
gccaacgcgccgcgcaacaacgttctgaagtatctggattacgtcttcactggagtcttc
acgtttgagatggtgattaagatgattgacttggggctgctgctccaccctggcgcgtat
ttccgtgacctgtggaacatcctggacttcatcgtggtcagcggagctctggtggccttc
gcctgctcgagcctcatgggatcccagcaaagcgtggccagagggaccaaaggcaaggac
atcaacaccatcaagtccctccgggtcctgcgggtcctgcggccactcaagaccattaag
cgtctgcccaagctgaaggccgtgttcgactgtgtcgtgaactccctgaagaacgtcctg
aacatcctcatcgtctacatgctcttcatgttcatcttcgccgtcatcgccgtgcagctc
ttcaagggaaagttcttctactgcaccgacgagtccaagggtctggagaaagactgcagg
ggtcagtttctggactatggccgggatggcgtggcagctcagccccgagagtggaagaag
tacgagttccactacgacaacgttctctgggccttcctgacgctcttcaccgtctccacc
ggagaaggctggcccatggtcctgaaacactccgtggacgccacctacgaggaccagggc
cccagcccgggcttccgcatggagacgtccatcttctacgtggtctacttcgtggtcttc
cccttcttcttcgtcaacatcttcgtggctctgatcatcatcacgttccaggagcaggga
gacaaggccatgtcggagtgcagcctggagaagaacgagcgagcttgtatcgacttcgcc
atcaacgccaaaccgctgacgaggtacatgccagcgaacaagctgtccttccagtacaag
atgtggaagtttgtggtgtcgccgccgttcgagtacgccatcatgactttaatcgccctc
aacacggtcgtgctgatgatgaagttctacggagctccagacctgtacgagtcgatgctg
aagtacttaaacatcctcttcacggcgctcttcaccctggagtgcatcctcaagatcatt
gccttcggccctctgaactacctgaaagcagcgtggaacgtgttcgactttgtgaccgtg
ctcgggagcatcacagacatcctggtcacagaggtgaagacggacaagatgatcaacctg
agtttcctgcgactgttccgagccgctcgtctcatcaagctgctgcgacagggctacacc
atccgcatcctgctgtggaccttcgtccagtccttcaaggctctgccgtacgtctgcctc
ctcatcgccatgctcttcttcatctacgccatcatcggaatgcaggtgtttggaaacatc
gagctgaatgaagacaccgccatcgatcaccacaacaacttccagacatttttccaggcg
ctgacgcttctcttcaggagtgcgacgggcgaggcgtggcatgagatcatgttgtcgtgt
ctcagtaaccggccgtgtgatagactctcaggaactgtggggaaggagtgtggcagcgac
ttcgcctacttctacttcgtctccttcatcttcctctgctccttcctgatgttgaacctc
tttgtcgccgtcatcatggacaacttcgagtacctaaccagggacgcctcgatcctgggg
ccgcatcacctcgacgagttcatccgtgtgtgggcggagtacgacccggctgcgtgcggg
aggacttgctatcaggatatgtacaaattgttgcgttttatctctcctcctctgggtctg
gggaagaagtgcccgaacagggtggcctataagcgcctggtgaggatgaacatgcccatc
gccgatgacaacacggttcacttcacctccacgctcatggccctgatccgcacagccctg
gagatcaagctggcatctggggtcctggcgcagcgtttgtgcgacgctgacctgaagagg
gagctgaaccgggtttggccgaacctgtcgcagaagaccgtcgacgtgctggtgacaccg
cacaagtacaacgagctgacggtggggaaagtttacgccgctttcatgatcttcgactac
tacaaacagaaccgagccaagcgactgcagcagcagcagcatcctgcaggaggcgctcag
agtaaaatggggacgttgttccgtcctgtgctgccgctcactcacatacaggaagtagaa
cctcggatctgcagccccaaacagcccctccctccccagcctgagccggaacggacgcca
gaggccccgcccattaccgccatcaccaccgccacgtccgccacgtcgataaacagggac
gcaatattaaaccagcggagcggcatcaaacactcgcagtccggggacgtttctcaggcg
gcgccgaggcccagaggtctgaggaagctgcagaggggtcagtcggaggatgttccgtat
tacaccagacctcaggagttggtggagctgaagcaggtggaggacctctccgactcggag
ggatatcccagcctggagggccactaccgagcggcttctctcccccgactcaacgccgag
tactaccggagccaccctcgccacgcccctgggacccacctggcaccgattgtcgacctc
agtcccataaggcgctcggcgtcctcgctgacgccgcagctctaccatgaggacgggctg
agtgagtacgacctggagcggcttggcctggctcaggcctcgacgggtcaggaccgagcc
caccaccatcaccaccaccaccgctgccatcgacgcagggacaaggacaaggacaagaag
cagaagtcgctggacaggaccgcgtcggttcaaccgtccagcaccgtcgattcgttcacc
gacccttcagccgaaggtttgtccagagagcgagcgagggagcgggaccgcagccggcct
cacgagcgcagacaccactcctccgccggagagaagcagcgctactactcctgtgagcgt
tacggcagcagggagcagtgccacgcccggtcggccggtcccagccgatccacgtcaccc
ggtgagggtcaggacgccggtttgctcaaacagtatggcagcaacgtgggcaaagcgggc
gctgggacgctcccctctggttccagcacgccgggccgtagtcgcaggcagctgccccag
acgcccctcacccctcgtcctgccgtgacctacaagaccgccaactcctcacctctcccg
tccggtgccagcaactccacgaaagggcaccagactcgcttcagccgtggcctttcagag
cacgaccgcttatacgtggaccacaacgagtccccgataccggtcacacgcattggttcg
gacccttatttaaaccggcagctgcaggacgcttctcgacaggccctccttgaggagagg
gaggacttgcaggaccccgtgagcagccacgggtcaggggcccgctctgccagaaccact
gcctcaaccacagcctctgcttcacacggaactgccgccgcggccggcaccatgcccgtc
acgcaggcccgggcggcagtggtgccaaacgggttccacttcaccctcggggtcagctcg
gtgtccgggcctgggagcagagggacgggaagtctcagggagagggaggacgaggactgg
tgctaa
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