Hippoglossus stenolepis (Pacific halibut): 118125622
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Entry
118125622 CDS
T08308
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118125622
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118125622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
118125622
NCBI-ProteinID:
XP_035040288
LinkDB
All DBs
Position
18:complement(10090391..10165861)
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AA seq
2122 aa
AA seq
DB search
MTTSANWVANGASLEDCHSNIFSLAELTGIKWRCYSFRGSGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKGFVRLGRWFFKPHDLEEKTLGNSEHLSCSFSFFLHGESNVCTS
VEIAQHQPAYHITEHHIRLVQTSITPVQVILSPYGLSGTLTGQAYKMSDPAVRKLMEDWS
YFYPMVLQQKEGGGEKEKEETSQAYGRNSHVAVEVIVGGVRMTYPAAFVLVAQGDLPVEQ
PPPVPAAQGLSRESNHCSVPLTPPTSPEQPCSADSGFVTSVSSVHTMDSSMGVASVSPKH
SGKKLTCQVVHQAWRECYLSQPQHVPNPPSDSTPKKEVPNGVTTWDFNDLGARAPCSCSR
VRQQKLNLTNTSSANTQTSANPTQSSGPSLYPPSLPKHKTSEKTEKADKQSKRPAMISFH
HRLSITQDSPLEQDSPGGPQLGGLVALEPSMEPLAVLPTCKYPKTLSRKAAESLLHSPMS
PLPPTLSPHPRVQDPEVLDGPVDMSVCPDGMSGLGLISSETAVYTALLRQRESGAAWWRG
FRTPRTDKTDCRPPELPADKLEEVKTEAFTEGAPLKRLYTQTFKRFKISEDRVKEHIHTL
GLFQQPGVETLREPGEDPYDFKEGDIEYTFSSSKRLKGQGREPSKKAKGEEITSNGVLPD
GKDAMSIFNSAPKSDVCDAVDESSQDDAAAKANPSLTREKDLVVNISDLDNIFDEDEEEL
GTVYPNQHSTKQPLSTEDRPHGKEGRVAVPYPSTVADLQRMFPTPPSLEQHPAFSPITTY
RDTPSQEPPAPSGAADHLPILAAMHLNEYRMEMDEGMASPRQEDIKPQIGSSMFAPLSCL
PSQTLPPLKIPDQCYYRPSWALMPKMEHFPAVMHPQNNPFIKDGYTNVPSVNTLTDQEYG
QMSGNTASVGTTVGILPSPATPRFSVPTPRTPRTPRGMNAASSGHGSVKQDGTELSSPAS
TPSTSMPLSSVEPQARPGPSLPEAHSLYSILLLSDSVLNVFKDRNFDSCCICACNMNVKG
ADVGVYIPDSTCEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIYGRTSEVGRAAERRLA
LCRRDPTMRDPRAKRPQDAAPASPSVMILLQEQCSQPISSLTALHLPLSCSCHGRKGALL
QSWMSEKQWADGSDACVECYNALEQGLQYVDNPTGGKVDPAVVRSTALHSWPHTNVVDMS
KLSSQDMVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEES
PEPLPIPTVLLGYDREREFLALSPLALPFWEKLLLEPYGGQRDVAYLVLCPNSPSLLAAA
RAFFQELSAVYETCRLGKHRPLAKVSREGLVRVGEDVEPEKLEELDVEQWMTGPWAGQQH
NDNLSKLKLYAYACKQQLGPQLSALPLDSSLLLPPKVQPPINNTSSVQPASSGQTQAWAP
EGEQAQGPVSSASAPTPTGATSGPTGETTQGGTSDSKGSSSATPPANTPAEPPELTAEQA
RIGIPTLADSVDSHANPPAVVIYIVDAFLSSSAARGEGGEEEEGDEVEAGSIWLLGLLRC
YTEMLQTLPEVMRPALVLQVVPCQYLLQPASGESHLYLQHLRSMAFSCYSQCRRLLPQQT
HIKSLTGFGPVSTVNSVLKGPEHPSPLQLYTAPFILGPTRPKQPEQGEIWAEIPPKYNVL
YVGYCLSHDQRWILVSCTDQQGELLESCIINIDVPNRARRPKVSARKMGLQKLWEWCIGI
IQMTSLPWRIVIGRLGRLGHGELKDWSSLLGEHSLHSIGRQLREACRMCGISATESPSIL
SACLVAMEPQGSFVIMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQ
LAPSSYPTEDNNDDMFDLPFPDELENDIGHDMMLITGNLHPSPNTSPVPSPGSPSGMGMG
SHFNHTRSQGERLLSRDNPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLF
LKASLHHHISITQSDELVTDKSKRTPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDR
QSCLPVHLAVLIQMYNAILNML
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcggcgaattgggtggctaacggggcaagccttgaggactgccactccaac
atcttctctctggcggagttgacgggcattaaatggcgctgctacagcttccgcggcagc
ggggagtacgggccggtgatctcggccccggcccaggacgacccggtacttcgcagcttc
atgcgctgcgtgcaggccaacctgctgtgcgtgtggcggcgcaagatcaagcccgacgcc
aaggagctgtggatcttctggtggggcgaggagcccaacctctctgacgtcatccatcat
gagctggaagtggccgaggagggactgtgggagtgcggactgtcctacgagtgcaggact
ctcctgttcaaggccattcacaacctgctggaaaggtgtttgatggataaaggatttgtg
cggctcgggaggtggttcttcaagccacacgacctggaagagaagactctgggcaacagt
gaacacctatcatgttccttctccttcttcctccacggggagagcaacgtgtgcacgagc
gtggagatcgcccagcaccagcccgcgtaccacatcacagaacaccacatccgtcttgtg
cagacctccattacgccagtgcaagtgatcctgagtccgtacggtctgagtggcactctc
accggtcaggcctacaagatgagtgacccggccgtacggaagctgatggaggactggagc
tacttctaccccatggtgctccagcagaaagagggaggcggagagaaggagaaagaggaa
acaagtcaggcctacggtcgcaacagtcacgtggctgtggaggtcatcgtaggtggagtg
aggatgacctacccagctgcttttgtgctggttgcccagggggacctaccggtggagcag
cctccacctgttcctgcggctcagggcctcagcagggagtcgaaccactgcagcgtgccg
ctcacgccgccaacgtccccggaacagccctgctccgcggacagtggctttgtgacctct
gtctccagtgttcacacaatggacagcagcatgggggtcgctagcgtcagcccaaagcat
tctgggaagaaactcacgtgtcaggtggtgcatcaggcctggagggagtgctacctcagc
cagcctcagcatgtaccgaatccaccatctgactcgacgcctaagaaggaagtgccaaat
ggagttaccacatgggacttcaatgatctgggagcgagagcgccctgcagctgctccagg
gtgaggcagcagaagctaaacctgaccaacacatccagtgccaacacccagaccagtgcc
aaccccactcagtcctccggcccgtcattataccctccctccctgcccaaacacaagaca
agtgagaagacagaaaaggcggacaaacagtccaagaggccagccatgatctccttccac
caccgtctatctatcacgcaggactcccccctggaacaggactcaccaggagggccccag
ctcgggggtctcgtggcgctggagccatccatggagcctctggccgtgctgccgacttgc
aagtatcccaaaacgctctccaggaaagctgcagagtccctcctccattcaccgatgtct
ccgctaccacccacgctcagcccgcacccccgggtgcaggacccagaggttctggacggg
cctgtggatatgtctgtgtgtccagacggaatgtcaggtctggggctgattagcagcgag
acagctgtgtatacagctctgctgaggcagagggagagtggagctgcctggtggagaggc
ttcaggacgcccagaactgataagactgactgcagaccccccgaactccccgctgataaa
ttagaggaagtgaagacggaggcattcacggaaggagctccgctaaagagactatacaca
cagactttcaagaggtttaaaatctccgaggacagggtgaaggaacacatccacactttg
gggctgttccagcagccgggtgtggagacactgcgcgagcccggggaggatccctacgac
tttaaggaaggagacatcgagtacactttctcctcttccaaacggttaaagggccaagga
cgagaacccagcaaaaaggccaagggagaagaaatcaccagcaatggagtgctgcctgat
gggaaagacgctatgtccatttttaactcggcaccaaaatcagatgtttgtgatgctgta
gatgaatcgagtcaggacgacgcagctgccaaagcgaatccttctctgaccagagaaaaa
gatctggtggtgaacatctctgatctcgacaacatctttgatgaagacgaggaagagctg
gggactgtttaccccaaccagcactcaacaaagcagccgctgtcgactgaagatcgccct
catgggaaggaggggagagtcgcagtaccttatccatcaacagtagcagacctccagcga
atgtttcccaccccgccctctttagagcagcacccggccttctcccccatcacgacgtat
cgtgacaccccgagccaagagccacccgcacccagcggagcagccgaccacctgcccatt
ttagccgccatgcacctcaatgagtacaggatggagatggatgagggcatggccagcccc
aggcaggaggatatcaagccacaaataggctcctccatgtttgctccactgtcctgccta
cccagccagactctaccaccactcaagattcctgaccagtgttactaccgtccatcctgg
gccctaatgcccaaaatggagcatttccctgcagtcatgcatccccagaataaccctttc
atcaaggatggatacacaaacgtccccagcgtcaacaccctcacagaccaggagtatggc
cagatgagcggcaacactgcttctgtgggcaccaccgttggcatcctcccatctcctgcc
actccccgcttctccgtgcccacgccacgcacccctcgcacgccgcggggtatgaacgct
gcgagctctgggcacggctcggtgaagcaggacggtaccgagcttagctcacctgcctcc
accccctccaccagcatgcctctcagctctgtcgagccccaagcccggccaggaccctcc
ctgcctgaggcccacagcctgtactctatcttgctcctgtcagactccgtcctcaatgtc
ttcaaggatcgcaactttgacagctgctgtatctgtgcctgcaatatgaatgtcaaagga
gcagatgtgggggtgtacatccccgattccacctgcgaagatcagtaccgttgtatgtgt
ggcttcagtgccatcgtgaacaggcggctggcccacggcacgggcctcttcctggaggac
gagctggatatttacggtcggacttctgaggtgggccgggcagccgagaggaggctggct
ctttgccggcgggacccaacgatgagagaccccagggccaagcggcctcaggacgcggcg
ccggcatcgccatcggtcatgattcttctgcaggagcagtgctcccagcccatctcctcc
ctgacagcactgcacctccctctcagctgttcctgtcacggccgcaagggggcactgctg
caaagctggatgtctgagaagcagtgggcagacgggagtgatgcctgcgtggagtgttac
aatgccttggaacaggggctgcagtacgtggataaccccacaggagggaaagtagatcca
gctgttgtcagaagtacagctcttcactcctggccacacactaatgtggtggacatgagc
aagttgtcgtcccaggatatggttcgtatgctgctgtccctgcagcctttcctgcaggac
gccatccagaagaagagaacaggacggacctgggaaaacatccaacacgttcaaggcccg
ctcacctggcagcagttccataagatggctgggagaggttcctacggttctgaagagtcc
ccggagcccttacccatccctacggtgttactgggctacgaccgagagagggagttctta
gcgttgtcccctttagcattaccattctgggagaagttgctactggagccgtacggtggg
cagcgggacgtggcctatctggtgctgtgccccaacagcccctctctgctggccgcggcc
cgggccttcttccaggagctcagcgctgtttacgagacctgccgccttgggaagcaccgt
cctctggccaaggtttccagggagggtcttgtgcgtgtgggggaggacgtggagccggaa
aagctggaggagctcgatgtggagcagtggatgactggaccctgggctggacagcagcac
aatgacaacctcagcaaacttaaactctatgcttacgcctgcaagcagcagctaggtccc
cagctctcagctctgcctctggacagcagtctcctgctgcctcccaaagtccagcctccc
ataaacaacacgtcctcagtccagcctgcctcgtctggccagactcaagcctgggctcct
gaaggagagcaagctcaaggtcctgtcagctcagcaagcgctccgaccccaactggagcg
acctcaggcccgacaggggagacgactcaaggaggaaccagcgactcgaaggggtcttct
agcgccacgccaccagctaacacaccagcagaaccccctgagctaaccgcagagcaggct
cgaatcggcatccccaccctggccgactcagtggacagccatgccaacccaccagctgtt
gtcatttacatagtggatgcttttctcagctcaagtgcagcgagaggtgaaggcggagag
gaagaggagggcgacgaggtagaggccggtagcatttggctacttgggctccttcgctgt
tacacagagatgctccagactttgcctgaggtgatgagacctgcactggtgctacaggtg
gtgccatgccagtatcttctgcagccagccagtggggagagtcacctgtacctgcagcac
ctgcgctccatggccttctcttgttactcccagtgcagacgtctgctgccccagcaaaca
cacatcaagtccctgactggctttggaccagtgtccactgtcaactctgtgcttaaaggt
ccagagcatccgagcccgctgcagctctacacggccccgttcatcctcggtccgactcgt
cccaagcagccagaacaaggagagatatgggcagagatccctcccaaatacaacgtcctc
tatgtaggatactgcctatcacatgaccagcgctggatcctggtatcctgcactgaccag
cagggggagctcctggagtcctgtatcatcaacattgatgtgcccaatagagcgcgacgt
ccgaaggtttcagcgaggaagatgggactgcagaagctgtgggagtggtgtattggcatc
atccagatgacctcactgccgtggaggattgtgattggtcgattaggcagactcgggcac
ggggagctaaaagactggagctcgctgctcggggaacactccctccattcaatagggcgc
cagctgagggaggcttgtcgcatgtgtgggatctcagctaccgaatctcccagcattctc
agcgcctgcctggtagccatggagccacagggctcctttgtcatcatgcctgatgcagtg
accatgggctcagtgtttggacgcagcacagctctgaacctgcagacgtcacagctgaac
acacctcaggatgcttcctgtactcacatcctcgtcttccctacttctgccaccacccag
ctggcacccagctcctaccctacagaggacaataatgatgacatgtttgatctgcctttc
cccgacgagctggagaacgacatcggccacgacatgatgctgatcacggggaacctccac
ccttcccccaacacctcccccgtgccctcgcccggttctccgtccgggatgggaatggga
tcccacttcaatcacaccaggagccagggagagcgcctgctgtccagggacaatccaccg
gaggagctgaagcagcagccactggctctgggttactacgtctccactgcacaagcaaac
ggactccctcactggttctgggcctcctgccctcaggctgagagtcagtgtccgctcttc
ctcaaggcgtctctccaccaccatatctccatcacccagtcagatgagctggtgacagac
aagagtaagaggacccctcacccattagattcaaagaccacctctgatgtgctcaggttt
gtattggaacagtacaatgccctctcctggctgacgtgcacccctgccacccaagaccgc
caatcctgcctgcctgtccacttggctgtgctgatccaaatgtacaatgccatcctgaac
atgctttag
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