Hippoglossus stenolepis (Pacific halibut): 118125681
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Entry
118125681 CDS
T08308
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hsp01100
Metabolic pathways
Module
hsp_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118125681 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118125681 (csgalnact1a)
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
118125681 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118125681 (csgalnact1a)
Glycosyltransferases [BR:
hsp01003
]
Glycan extension
O-Glycan
118125681 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Sec8_N
DUF5320
PEP-utilisers_N
DUF4140
Csm1_N
Motif
Other DBs
NCBI-GeneID:
118125681
NCBI-ProteinID:
XP_035040412
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All DBs
Position
18:13092667..13130673
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AA seq
592 aa
AA seq
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MLHTAMLRRGLLTWVSRVGGALVLLCCSLSLLYVMTCSPPHSDDPPLSHALPRAGSNHPS
LGGTGPGVGAGAGGTGGAGVGPAQSGGSAGVQSYQVLLQEREEQHRHHISSLKKEIAQLK
EALQERSQQLKGVQESLKRGGPAEGPETGVGSQAGGLVETQGAKSQQADLQDFLRSQLSK
AEVTAGIRLPSEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDKREELGDVLETALHS
LNAPPSQDGRGAAEKTQSSKVYAPSDFIEGITRTERDKGTLYELTFRGESSNEFRRLVLF
RPFGPLMKVKNERVDTSNIPINIVVPLSRRTDKFKQFMQNFREVCVRQDGRVHLTVVYFG
KEQMSEVRSTLENTSREVNFKNFTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDIY
FTADFLNSCRLNTQPGKKVFYPVLFSQYNPTLIYGSPEHIPTVEQQLVIKKDTGFWRDFG
FGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKQCA
DELPPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLRKQKQQQNSNPKKT
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctacatacagctatgttgcggcgtggacttttaacctgggtctcccgtgttgggggc
gcgctggtgctcctctgctgctccctgtcactgctctacgtgatgacctgcagcccccca
cactccgatgacccgccgctgagtcatgcgttaccccgcgctggatcaaatcaccccagc
ctggggggcacaggaccgggagtgggagcgggggccggtgggacaggaggagccggagtt
gggcctgctcaaagcggaggatcagcgggtgtccagtcgtaccaggtgctcctccaagag
cgtgaggagcagcaccgacaccacatctcctccttgaagaaagagattgcacagctgaag
gaggctttgcaggagcgcagccagcagctgaaaggagtgcaggagagcctgaagagagga
ggccccgcagagggaccggaaactggggtcgggtcccaggcaggcggcctcgtagagact
caaggagccaagagccagcaggccgatctccaggacttcctgaggagccagctctcaaag
gctgaggtgactgccggcatcaggctgcccagcgagtatgcggtggtgccatttgagagt
ttcacgctgcagagggtgtaccagctggagatgggcctgacgcgtcaccctgaggagaag
ccggtgaggaaggacaagagggaggagctgggggacgtgctggagacggccctgcacagc
ctcaacgcacccccatcccaggacggcaggggcgcagcagagaagacgcaaagtagcaaa
gtttacgcaccgtccgacttcatagaaggtatcactcgcacagagagggacaaagggacg
ctgtacgagctgaccttcagaggggagtcgagtaatgaattcagacgcttggtcctgttc
cgtccctttggaccgctgatgaaagtgaaaaacgagagggtggacacatcaaacatcccc
atcaacatcgtcgtcccgctgtcccggcgcacagacaagttcaaacagttcatgcagaac
ttcagggaggtgtgtgtgcggcaggacggccgagtccatctgacagtggtgtattttggg
aaggagcagatgagcgaagtccgcagcactctggagaacacgtccagggaggtgaacttt
aagaacttcactctgctgcagctggacgaggagttttctcggggtcgaggtctggacgtc
ggggcccgggcctggaagggaggcaacgtgctgctcttcttctgcgacgtggacatctac
ttcaccgccgacttcctcaacagctgccgactgaacacacaacccggtaaaaaggttttc
tacccagtgctattcagccagtacaaccccactctgatctatggaagccctgaacacatc
ccaactgtggagcagcaactggtgatcaagaaagacacggggttctggagggatttcggc
ttcggcatgacctgccagtaccgctccgacttcattaacataggaggttttgacatcgac
atcaaaggctggggaggtgaggacgtccacctctacaggaagtacctccacagcaacctc
ctcgtggtgcgggcgccgtcacgaggcctgttccacctgtggcacgagaagcagtgcgcc
gatgagctcccgccggaccagtaccgcatgtgcatgcagtccaaggccatgaacgaggcc
tcgcacggccagctggggatgctgttcttcaggcacgagatcgaggcgcacctccgcaaa
cagaagcagcagcagaactcaaaccccaagaagacatga
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