Hippoglossus stenolepis (Pacific halibut): 118125721
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Entry
118125721 CDS
T08308
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118125721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118125721
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
118125721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
HEAT_GCN1_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
118125721
NCBI-ProteinID:
XP_035040517
LinkDB
All DBs
Position
18:complement(9662094..9681082)
Genome browser
AA seq
2658 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSSLLVCRDEN
LVTQLAHSLTQVSTEHIELKDNLGNDEPEGDMPILLQTLLSRNPKVFGDKSVMQQPMMQQ
YKIAQNQMHGSPGSNYQQTAVPQSPPGCFTSPQSGSASRFVPQQNSPIPSPYTPQSPADY
MQYNPPSYSQHHQTQQVPGGVRNSHDNKVSGLSSSSSNHNARLVTDEEYMNMAHRLGNED
NDPSVRAAAYRVKSPQSVCSSAGSEEMAKTGSRPDLLLASANRKKKQRERSKEENEQMDK
NNLYDIVGSPAKDSAKLTLKLSRVKIPDIDESREFPPRAHMDSDHEIDLMNNNQLSRDAQ
DFSHKFGAAEQVNCQPPPVRPNTKEIAVVGGGVYDDAEMDAIAEIERIESETANERERWS
KEVQDKDKPLKKRKQDSYPQESGAEAGDGPAVQGGNAGSKVTPKKTNPASNCASRPALMV
SIDLQQAGRVTGQPVVVLEANPLCDDQLKHLNSKADVKVDKVVENKPGINKKHSDNPKER
IQKKSGSDGQPEKQEAPLVAKQKQEHQRESKHKHDGKAESGNGRSDERRTDTPRQKHDKH
SESRNKEEKNHNSHRSHVNQAETPKTISRMERNSKHGEDKAKDKEKDKEKEKDKDKDKDK
DKDGNKDGNKDGNKEGNKEREKDREKDRAKHRERDKDRDKCKDRNSDRDRDREKDRERKH
KTQSTENCNRHSPERHSKSDSPRVKQDGSRKSADFNGRQKTDTSALQSPQNKKEERGGDG
SVRCQTGNKQQSLETKPSEFPSFLLGGKTGSLKNFVIPKLKRDGKEKEPLPPNKLKEVWS
EPLIRLERMSLVENLNKGAKPVVVVQKLSVDEVKKIIKESRNAHGSKSKNSSSFDKSGKE
KSLCEKTNKRRHSVVSKKLKYAELDSNDEDKDDDEDDDSENKSAKKRHKKDHDKTSKQEE
RKGSGEHRQSGGVQNVRRGSGNRPRDRILAESDEESPPPILSDVAKKLKKKEKHKNKKAY
DPKMTLEEVMDSSTFKRFAASMDSILENLDEVDLTAEDDDEIPQELLLGKQQLNQLGNDS
AKIKAMGIFNKFSSSKLMKILNVLEKNIQDSVKLSTLLSHDNDSMDEERLWRDLIMERVT
KSADACLTALNIMTSPHMPKVVYMEDVIERVLQFTKFHLQSSLYPQYDPAYRVDPHGGGV
HTPKSKRGKSSSHKQKVVVVLYSKVCEIVSSISELLELQLQTDTTILQVSTLGITPFFVE
NVSELQLCAITLVTAVFSRYEKHRQLILEEIFTSLARLPTNKRSLRNFRLNNGDSDGEPV
YIQMVSALVLQLIQCVVHLPSVREAEDESHKKVDKDVLITNTFETAMRTAQNFLSVFLKK
CGSKQGEEDYRPLFENFVHDLLSTINKPEWPASELLLSLLGRLLVHQFSNKQTEMALRVA
SLDYLGTVASRLRKDAVTSNMDQKAIDRILRETPGSDEVQQLQKDLLDYLDESSDKDSSL
LFARKFYIAQWFRDATSEAEKAMKSQNEDENWKGHSHSKDVDSTEEIMQKADARKKFLRK
VMKTSQSHSSALRMNAIDYDDSCVIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTK
AMKCLSEVVAVDPSILARLDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPQLIEQYYD
MLIERILDTGISVRKRVIKILRDICLEQPEFHKITEMCVKMIRRVNDEEGIKKLVNETFQ
KLWFTPTPGHDKEAMTRKILNITDVVLACKDTGYDWFEQLLQNLLKSEKDASYKPARKAC
VQLVDNLVEHILKYEESLADCEDKGVNSGRLVACITTLYLFSKIKAELMVKHAMTMQPYL
TTKCNTQNDFMLICNVAKILELVVPLMDQPSETFLNTIEEDLMKLIIKYGMTVVQHSVSC
LGAVVNKVTHNYKFVWACFNRYYGALAKLKTQHQEDPSSSTLVANKPTLLRSLFTVGALC
RHFDFDQEDFKGASKIIIKDKVLELLLYFTTHEEEEVQIKAIIGLGFQFIMNPEIMFVQD
VKVLYNSILSDETTMVSRKIQVLKNLQTYLQEEDSRMQEADRGWKSQAKEEDLKEMGDIS
SGMSSSIMQIYLKQVLDSFFHSQSTVRHFALSVITLTLNQGLVHPVQCVPYLIAMGTDPE
PTMKNKADQQLVDIDKKYTGFIHMKAVAGLKMSYQVQQAINGPKKTVIRGVRPDEPDTAL
CSHLYSLVRGNRQYRRAFLISLLNLFDDSSKTEANMLLFIADNFACFPYQTQEEPLFIMH
HIDITLSVSGSNLLQSFKESLRKEPVQREKKMKKKKKKKKKKKKKQHRRMQNSSDEDENE
EQSSSSSSSSSSSSSDEEEEVVHKSKKTVGSDSDMEDEDAVMDRLPENPSPLLEFANASQ
GILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKSKVHFNPRQTLEYLKSDL
AITDLSHETKRNIVKQYLDFKVLMEHLDRDEEEEGEASANARNKAITSLLKGPKLQNHNH
NNHTAPVDTDEEDSDDEDVPGRKPRKGKDGVEDSGHMNEGVDAMDVIAICRPKYKDRPQI
ARVIQKTKAGYSIHWMTGTYSGPWAVAKKRDGRKKVPWVDTIKESDIIYKKISLTSGHKL
TNKVAQTLRALYAAKEGN
NT seq
7977 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgtccccatcactactctcgctggaattgctagcctgaca
gacttgttgaaccagctgcccttgccttctcctctcccggccactactgctaagagtctg
ctctacaatggaaggatctctgaagaggtcagcagcctcctggtgtgtcgggacgaaaat
ctggtgactcagctggcacatagccttacccaggtctccactgaacacatagagttgaag
gacaacttggggaacgatgaacccgagggtgacatgccaatacttctacaaacgttgctt
tccaggaaccccaaagtctttggggacaaaagtgtgatgcagcagccgatgatgcaacag
tataagatagcccagaatcaaatgcatgggagtccaggatcgaattaccagcagaccgct
gttcctcaaagcccccctggatgttttacgtccccgcagtctgggtcagcttcccggttc
gtaccccagcagaacagccccatacccagtccctatactccccagagtcctgcagactac
atgcagtacaatccacccagttactcccagcaccatcagactcagcaagttcctggtggt
gtaagaaacagccatgacaacaaggtctctggtctctcaagtagttcttctaatcacaat
gcaagactggtcaccgatgaagaatacatgaacatggctcacagactgggaaatgaggac
aatgacccctctgtgagggctgctgcatatcgagtcaaatcaccacagtctgtgtgttcc
tctgctggaagtgaagagatggcaaaaacaggatccaggcctgacctgctcctcgcctct
gccaaccgcaaaaagaagcagagagagagaagtaaagaggaaaatgagcagatggataaa
aataacttgtacgacattgttggttccccagcaaaagactctgccaagctgacgttaaag
ctgtcccgagtgaagattccagatattgatgaatccagagaatttcctccacgggcacat
atggactcagaccatgaaattgatttgatgaataataatcagttgtcaagggacgctcag
gacttttcacacaagtttggtgctgcggagcaggtgaactgtcagccgcctcctgttcgg
ccaaataccaaggagattgcagtcgtcggtgggggcgtgtatgatgatgcggagatggat
gcaattgcagaaattgagagaatagaaagcgagacagccaatgagagagaacgatggtct
aaagaagtccaggataaagacaagccactgaagaaacggaagcaagactcatatcctcag
gaatccggagcagaggcaggtgacggacctgctgtacaagggggcaacgctggcagcaag
gtgacacccaagaagacaaatcccgcaagtaactgtgccagtcggccggctttgatggtc
agtattgacctgcagcaagctggcagagtgaccggacaacctgtcgtggttttggaagca
aatccgttgtgtgatgaccagctgaaacacctaaattcaaaggctgatgtgaaggtagac
aaagttgttgaaaacaaacctgggatcaacaaaaagcattctgacaatcccaaagaacga
attcaaaaaaagtctggctcagatgggcaaccagagaagcaggaagcacctctggttgct
aaacagaagcaggagcaccagcgggaatccaaacacaagcatgatggcaaggcggagagt
ggtaacggccgttccgatgaaagacgaacagacacaccacggcaaaaacatgacaagcat
tcagagtcgcgcaacaaagaggaaaagaaccacaacagtcacagatcccatgtcaaccaa
gcagagactccaaaaaccattagtaggatggagcgtaactccaaacacggagaggacaaa
gccaaggataaagaaaaggataaagaaaaagaaaaggataaggacaaagacaaagacaaa
gacaaagatggaaataaagatggaaataaagatggaaataaagaaggaaataaagaaaga
gaaaaagatagagagaaggacagggccaaacacagagaaagggataaagatagagataaa
tgtaaagatagaaatagcgatagagatagggacagagagaaagacagggaaaggaaacac
aagacacagtcaacagaaaactgcaacagacactctcctgaacgtcattcgaaatccgac
agcccgagagtgaagcaagacgggagccgaaagtccgctgactttaatggtcgtcagaag
acagacacttccgcccttcagagcccccaaaataaaaaagaagaaagaggtggggatggc
agcgtcagatgccaaactggaaacaaacagcagtcgttggagacaaaaccgagcgagttc
ccctcattcctgctcggtggcaagacggggagtctgaagaacttcgtgattccaaaattg
aaacgagacggcaaagaaaaagagccactacctccaaacaaattgaaagaggtctggagc
gaacccctgatccgactggagagaatgtctttggtagagaacttaaacaaaggagcgaag
cccgttgttgtggttcagaaactcagtgttgatgaggtgaaaaagatcatcaaggaaagc
aggaacgcacacggctccaaatccaagaactcgtcctccttcgacaaatcagggaaagag
aagtcactttgtgagaagacaaacaagcgaaggcacagtgtcgtcagcaagaaattgaag
tacgccgagttggactcaaatgatgaagacaaagatgatgatgaagacgatgactctgaa
aataagtctgcaaagaaacggcacaagaaagaccatgacaagacctcgaagcaggaagag
aggaaaggctctggagagcaccgtcaaagcggaggtgttcaaaacgttcgccgggggtcc
ggtaaccgtcctcgtgataggatcctggctgaatcggatgaagaatctccaccgccaatc
ctaagtgatgttgccaaaaaattgaagaaaaaagagaaacataaaaacaagaaggcgtac
gatcccaagatgacactggaggaagttatggactcctccacatttaagagattcgcagcc
agtatggatagcatcctcgagaaccttgatgaggtggatcttactgctgaagatgatgat
gaaatacctcaggagctcttgcttggaaagcagcagttgaaccagctcggaaacgattct
gctaagattaaagctatgggcatctttaacaagttttcttcaagcaaactgatgaaaata
ctaaatgtcctggagaagaacattcaggacagtgtcaaactttccacattattgagtcat
gataatgattccatggacgaggagcggctgtggcgcgacctcatcatggagcgggtgacc
aagtccgccgatgcctgtctgactgcactcaacatcatgacgtctccacacatgcccaag
gttgtgtacatggaggatgtgatcgagagggtgttgcagttcaccaagttccatctgcag
agctctctgtaccctcagtacgacccggcctacagggtggatccccacggaggtggcgtg
cacacaccaaagtccaagcgaggaaagagctccagccataaacagaaggtggtggtcgtg
ctctacagcaaagtgtgtgaaatcgtcagcagcatctcggagctcctggagttacagctg
caaactgacaccacgattctccaggtgtccactctgggtattactccgttttttgtggag
aacgtcagcgagctgcagttgtgcgccatcacgctggtgacagcagtcttctctcgttac
gagaaacacaggcagctcattcttgaagagatcttcacctcccttgccagactgcctact
aataaacgcagcctcaggaacttcaggctgaacaacggtgattcggatggagagcccgtg
tacatccagatggtctctgctctggttcttcagctcatccagtgtgtggttcaccttccc
tctgtgagagaagcagaggatgaatctcacaagaaggtggataaagacgtccttatcaca
aacacgtttgaaactgccatgaggacagctcagaacttcctctcggtgtttctcaagaag
tgtggcagtaagcagggagaggaggactacaggcctctgtttgagaacttcgttcacgac
ctcctgtccacaatcaacaagcccgagtggcctgcatctgaactactgctcagtttactg
ggccggctgttggtgcaccagttcagtaacaagcagacagaaatggctctcagggtggcg
tctctggactacctcggcactgtagcttcccgactgcgcaaagatgctgtaaccagcaac
atggaccaaaaggctattgaccgcattctcagagagacgccaggcagtgatgaggtgcag
caacttcagaaggacttattagattacctagatgagagcagtgacaaagattcatctcta
ttgtttgccaggaaattttatattgcccagtggttcagggacgcaacaagtgaggcagag
aaagcaatgaagtctcaaaatgaggacgagaactggaaaggtcacagtcattccaaggat
gtcgactcgactgaggagattatgcagaaagccgatgcacgaaagaaattcctacgcaag
gtcatgaagacttcacaatcacattccagtgctctgaggatgaacgcaatagactacgat
gattcgtgtgtaatcgtcagatatctggcctctatgaggccttttgcccagagctttgat
atttatttatcacagattctgagagttttgggtgagagtgctattgcagtcagaactaaa
gccatgaagtgtctgtctgaagtagtggctgtggatccaagtattctggcacggttggat
atgcagcgtggggttcattgtcgcctcatggacaactcaaccagtgtgcgagaggccgct
gtggagctcctgggccgttttgtgctaagtcgacctcagctcattgagcagtactacgat
atgctcattgaaaggatattggacacaggtatcagtgtaaggaagagggtcattaagatc
ctgagggatatctgcctggagcaaccagaattccacaagatcacggagatgtgtgtgaag
atgatccgaagagtcaatgacgaggaggggatcaagaaattggtgaatgagactttccag
aaactctggttcacgcccacacccggccacgacaaagaggccatgaccagaaagatcttg
aacatcacagatgtggtgttggcatgtaaagatacaggctacgattggtttgagcaactt
ctgcagaacctgctgaagtcagagaaggacgcttcgtacaaacctgccaggaaggcctgt
gttcagctggtggacaatctcgtggaacacatactgaaatacgaggagtctcttgcagac
tgtgaggacaaaggggtcaactcaggtcgtctcgtagcatgcatcaccactctctacctg
ttcagcaaaatcaaagcagagttaatggtcaaacatgctatgactatgcagccctacctg
accacaaagtgcaatactcagaatgacttcatgctgatctgcaacgtggccaagatcttg
gagctggtcgttccactgatggatcagccgagtgagactttcctcaataccatagaagaa
gacctgatgaagctcatcatcaaatatggcatgacggttgtacaacacagtgtgagctgt
ctcggtgcggttgtgaacaaggtcacacacaactacaagtttgtttgggcttgttttaat
cgttactatggagctctggcaaaactgaagacccagcaccaggaggaccccagcagctcc
accctggtagcgaacaagccgactctcctgcgttctctgttcacggtgggggctctctgc
cgacactttgattttgaccaggaggatttcaagggtgccagcaagattatcatcaaggac
aaagtgttggagcttctgctgtacttcaccacgcatgaagaggaggaagtccagatcaag
gccatcataggtctaggcttccagttcatcatgaacccagagatcatgtttgtgcaggat
gtgaaggttctgtacaacagtatcctctcagatgagaccactatggtcagtcggaagatc
caggtgttaaaaaacctgcagacttacctgcaggaggaggactcccgcatgcaggaggcc
gatcgcggatggaagagtcaagccaaggaggaggatctgaaggaaatgggggacatctca
tcgggcatgagcagctccataatgcagatttacctgaagcaggtgctggactccttcttc
cactcacagtccactgttcgacactttgccctgagcgtcattacactgactctaaaccag
ggcctcgtccatccggtgcagtgtgtgccctacttgatcgcaatgggaacagacccagag
ccaaccatgaagaacaaggccgatcaacagctggtggatattgacaagaaatatacaggg
ttcatccatatgaaggccgtcgcaggattgaagatgtcttaccaggtgcaacaggccata
aatggaccaaagaaaacagtgatccgaggtgttcgtcccgatgagccagacactgccctc
tgctcacatctctactccttggtccgtgggaacaggcaatatcgacgggctttcctcatt
tccctgctcaacctgtttgatgacagctctaaaacagaggcgaacatgctgctttttata
gcagacaactttgcctgcttcccctaccagacccaggaggagcctcttttcatcatgcac
cacatagacattactctctctgtctctggtagcaaccttcttcagtctttcaaggagtcg
ttacggaaagagcctgtacagcgggaaaagaagatgaaaaagaagaagaaaaagaagaag
aagaagaagaagaagcagcaccggaggatgcaaaatagctctgatgaagatgagaatgaa
gagcagagcagcagcagctccagcagcagtagctctagcagcagcgatgaggaggaagag
gtggtccataagagtaagaaaacagtgggttctgactctgacatggaggatgaggatgca
gtgatggaccgtctacctgagaaccccagccctctgctggagttcgccaacgcttcccag
ggtattctgctgctgctggtgctcaaacaacatctgaagaatctgtatggcttctcagac
agcaaaatccagaagtattctccgactgagtctgcgaaggtgtacgaaaaggcagtgaac
aggaaatccaaagtccacttcaaccctcgccagaccctggaatacctgaagagtgatcta
gccatcacagatctcagtcacgagaccaagaggaacattgtgaaacagtatttggatttc
aaggtactcatggagcacttggatcgcgacgaagaagaggagggggaggcgagtgccaac
gccagaaacaaagccattacttcactgttgaagggcccgaaactccagaaccacaatcac
aataatcacactgccccggtggacacagacgaagaggatagtgacgatgaagatgtgcct
ggaaggaaaccaaggaaaggcaaggatggcgtcgaggattcgggtcacatgaatgagggg
gtggatgccatggacgtcatcgccatctgccgtcccaaatacaaagacagaccacagatt
gccagggtcatccagaagaccaaagctggctacagtatacattggatgactgggacttac
tctgggccatgggctgtggcaaagaaacgggacggtcgcaaaaaggtgccttgggtcgac
actatcaaggagtcggatattatttataagaaaatctctttgacaagcggacacaagctc
acaaacaaagtggcacagacgttacgggcgctgtacgctgccaaggagggcaactga
DBGET
integrated database retrieval system
