Hippoglossus stenolepis (Pacific halibut): 118125818
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Entry
118125818 CDS
T08308
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118125818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118125818
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118125818
03012 Translation factors [BR:
hsp03012
]
118125818
04131 Membrane trafficking [BR:
hsp04131
]
118125818
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118125818
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118125818
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118125818
Translation factors [BR:
hsp03012
]
Eukaryotic type
Elongation factors
118125818
Membrane trafficking [BR:
hsp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118125818
Exosome [BR:
hsp04147
]
Exosomal proteins
Proteins found in most exosomes
118125818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
118125818
NCBI-ProteinID:
XP_035040734
LinkDB
All DBs
Position
2:complement(3890902..3897881)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKINRRDGNASGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKSGMVVTFAPVNVTTEVKSVEMHHEALT
EALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAASFTSQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVDKKAPTSGKVTKSAQKAQKVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagctccacataaacattgtggtaataggacatgttgactccggcaag
tccaccaccaccggccacctcatctacaagtgtgggggcattgacaagagaaccatcgag
aagtttgagaaggaagctgctgagatgggaaagggctccttcaaatatgcctgggtcctg
gacaagctgaaggcagagcgtgagcgcggcatcaccattgatatctctctttggaagttt
gagaccagcaggtactacgtcaccatcatcgacgctccaggacacagggacttcatcaag
aacatgatcacagggacttctcaggccgactgcgctgtgctgattgtggctgcaggcgtg
ggcgagtttgaagctggcatctctaagaacgggcagactcgtgaacacgccctccttgcc
tacaccctgggagtgaagcagctcattgtgggcatcaataaaatggattccactgagccc
aactacagccagaagcgctacgaggagatcgtgaaggaagtcagcacttacatcaagaag
atcggctataaccctgacactgtggcctttgtgcccatctctggttggaatggagacaac
atgctggaacccagccctaatatgacctggttcaagggctggaagatcaaccgtagagac
ggtaatgcctcaggcaccacgctgctggaggctctggatgccatccagcctccctcgcgc
cccaccgacaagcccctccgtctgcctctgcaggatgtctacaaaattggaggcattggt
actgtaccagtgggacgagtggagactggaatcctaaaatctggcatggtggtgaccttt
gctcctgtcaacgtgaccactgaggtcaagtctgtggagatgcaccacgaggctctgact
gaggcgctacctggcgacaatgtgggcttcaacgtcaagaacgtgtctgtgaaggatatt
cgccgtgggaatgtagctggagacagtcgaaacgacccaccacaggaggcggccagcttc
acctctcaggtgattatcctaaaccaccccggtcagatcagtgcgggctacgcccctgtg
ctggactgccacactgcacacatcgcatgcaagttcgctgagctcaaggaaaagattgac
cgtcgctcaggtaagaagctcgaggacaaccccaaggccctgaagtctggagatgctgcc
attgtggacatgatccccggcaagcccatgtgtgtggagagcttctccgagtacccacca
ctggggaggtttgccgtccgtgacatgcgtcagacggtggcggtgggagtgatcaagggc
gtggacaagaaagcccccaccagtggtaaggtcaccaagtcagcacagaaggcgcagaag
gtcaaatga
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