Hippoglossus stenolepis (Pacific halibut): 118125874
Help
Entry
118125874 CDS
T08308
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118125874 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118125874 (myo5b)
04131 Membrane trafficking [BR:
hsp04131
]
118125874 (myo5b)
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118125874 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118125874 (myo5b)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118125874 (myo5b)
mRNA cycle factors
P-body specific factors
118125874 (myo5b)
Membrane trafficking [BR:
hsp04131
]
Others
Actin-binding proteins
Myosins
118125874 (myo5b)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118125874 (myo5b)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118125874 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
Ac76
AAA_16
Motif
Other DBs
NCBI-GeneID:
118125874
NCBI-ProteinID:
XP_035040817
LinkDB
All DBs
Position
18:complement(1237480..1257276)
Genome browser
AA seq
1867 aa
AA seq
DB search
MTGQYYPYSKFTRVWIPDPEDVWTAAEITRDYKEGESVLHLKREDETPLEYPVGPKSNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFVESNHIYTYCGIVLVAINPYEQLQIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMSRDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRQYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTSAEDFTYTSLGENIFIEGV
NDAEDLKKTREAFTLLGVKDSSQGNIFRIMASILHLGNVEICSERGGESCRVLKDDAHLM
HFCRLLGVELKQMEHWLCHRKLATTSETYVKNMSSKEAANARDALAKHIYARMFDWIVEH
INRSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECRVPKGTDVNWAQKLYQHHTSKAQFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQLQLVADLFHEKDDAP
PSKNSRVNVRAAKSTPRAPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDFKE
PFSFDSSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMKKSDMTSSDKKLVC
KNLLGTVIKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRAACIKIQKTVRGWLQRVRYR
KIRKTAITLQRYGRGYLARRYAEYLRLTRAALVCQKQYRMVRDRRAYLRVRKAVVTIQAY
AKGMFTRRIYWEFLLHHKAMIIQKSVRGWLQRKKFKRARNAAIIIQCAFRRMQAKKLLKE
RKIEARSAQHLKNLNTGMENKIVQLQRKMDDQSKELKTQNVQLQTANVSMGSEVNKLRKE
LEQVRGQRGEGGQLTSLQDELERLKAELQEAHALRKRLEEEHGSEKMSLEQRVEELEKEN
SLLKSEKEEMNQKILQQTKNSQDMDSSVSQTEVSLQKELDAERQRYQNLLKEISRVEQKY
ENLKEELSLTKFQPGHMRNPSNQSSLESDSNYPSVSTSEVGDTEDSVQLVEEMGVEKAAM
DISLFMKLQKRVRELEQERKRLQTSVDKMEELAKHKSSEPRSPTSELEIADLAYNNLKRE
ELESENKKLKNNLNDLRKSIAERAAQNNSSNELQDGYNLLLSQLKSANEELDARKEEMLI
LRTQIVKNAQLQEKNQQVQQSNNAPEAPEAPEVPEVTEVPEVTEVPEVPEVTEVPEDKEE
ALKAYQGLTESKSIQQDWCYLNEDGELGLAYQGLKQVARLLEAQLQTQSRQHKDELEALH
TQIELLKADIEKKQEILNYTMSLSPEAQVDYSVQQEITRLTNDNLDLKELVEKLEKNERK
LKKQLRIYMKKVQELEASQAAALSSRSRPELSRQVTVQRKEKDFEGMLEYYKEDEALLAK
TLITDMKPNTVSATVPCLPAYILFMCIRHADYINDDEKVESLLTSTINSVKKVLKKNSDD
FETTSFWLANTSRLLHCLKQYSGDEVFMTQNSPKQNEHCLKNFDLAEYRQVLSDLSIQIY
QQLIKVAEGIIQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDTDGPSSYTLEALIRQL
GQFHSIMRDHGLDPEIVGQVVRQLFHCINAVTLNNLLLRKDVCSWSTGMQLRYNTSQLEE
WLRGNNLYQSKAAAILEPVIQAAQLLQVKKKTSQDAEAICSLCIALTTQQIVKVLNLYTP
LNEFEERVTVSFIRDIQTRLQVRNDPPQLLIDTKHTFPVLFPYTPSALSLETLHIPASLG
LDFLVRV
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcaatattacccttactccaagttcactcgggtttggatcccggaccctgag
gatgtgtggacggctgcagagatcaccagagattacaaagaaggagaatctgttcttcac
ctcaaacgtgaagatgaaacgcctctggagtatcctgtgggtccaaagagcaaccctctt
cccttcctccgtaaccccgacatcctggtcggagagaacgacctcacggctctcagctac
ctgcatgaacctgcggtgctacacaacctccgggttcgattcgtggagtccaaccacatc
tacacatactgtgggattgttctggtggccattaacccgtatgagcagctgcagatttat
ggagaggaggtcattaacgcctacagtggacagaacatgggcgacatggacccacatata
tttgctgtggctgaagaagcgtacaaacagatgtccagagacgagaggaatcagtccatc
atcgtgagcggagaatctggagcaggaaagacggtttctgcaaagtacgccatgcgtttc
tttgccacagtgggaggttcagctaatgacactaacgtggaggagaaggtcttggcctcc
agtccgatcatggaggccattggaaacgcaaaaaccacccgaaacgacaacagcagtcgc
ttcggaaagtacattcagatcggcttcagtcgacagtaccacatcatcggagccaacatg
cggacgtacctgctggagaagtctcgggttgttttccaggctgaggacgagaggaattat
cacatcttctatcagctctgcgcttctgccagtttaccagagtttaaagacctcagcctc
accagtgcagaagacttcacctacacgtcgttaggggagaacatcttcatcgagggagtg
aacgacgctgaggacttaaaaaagaccagagaggcgttcacgctgctgggtgtgaaggac
agtagtcagggcaacattttcagaataatggcgtccatccttcatctggggaacgtagag
atctgctcagagagaggcggagagtcgtgtcgtgtcttgaaggacgacgcccacctgatg
cacttctgccggctgctgggggtggagctgaagcagatggagcattggctctgtcacagg
aagttggctacgacctcagagacgtacgtgaagaacatgtccagcaaggaggccgccaac
gcccgtgacgccctcgccaaacacatctacgcccgcatgtttgactggatcgtggaacac
atcaacaggtctctgcacacgtcgtccaaacagcactccttcattggcgtcctggacatc
tacgggttcgagacgtttgagatcaacagttttgaacagttctgcatcaactacgccaac
gagaagcttcagcagcagtttaactctcatgtgtttaaactggagcaggaggagtacatg
aaggagcagattccctggactctgatcgatttctatgataatcagccgtgtatcgacctg
atcgaggctcgactcggcatcctggacctgctggacgaggagtgtagggttccgaaggga
accgacgtgaactgggctcagaagctctaccaacatcacacaagcaaagctcaatttcag
aaacctcgtatgtccaacacgtccttcatcatcatacacttcgctgacaaggtggagtat
cagtgtgaaggttttctggagaagaaccgagacaccgtgtacgaggagcagatcaacatc
ctgaaggccagtcagcttcagctcgtagcagatctgtttcacgagaaagacgatgccccc
ccctcaaagaactccagggtgaacgtccgcgcagccaagtcgactccgcgagcgcccaac
aaggagcacaggaagacagtgggacaccagttccgcagctctctgcatctcctcatggag
actctgaacgccacgacgcctcactacgtccgctgcatcaaacccaacgacttcaaagag
ccgttctcgttcgactcgagtagagcggtgcagcagctccgagcttgtggcgttctggag
acgatccggatcagtgcggccggatacccgtccaggtggacgtatcctgatttcttcagc
aggtatcgagtgttgatgaagaaatctgacatgacgtcatctgataagaagcttgtctgt
aaaaacctgctggggacggtgatcaaggagccagacatgttccagtttggaaagacgaag
atcttcttccgggcgggccaggtggcgtacctggagaagctccgcgctgataagttccga
gcggcgtgcatcaagatccagaagacggttcgaggctggctgcagagagtccgataccga
aagatccgcaagactgccatcactctgcagagatatggccgaggttacctggcccgcagg
tacgccgagtacctgcgtctgactcgagcagcactcgtctgtcagaaacagtatcggatg
gtgagagatcgacgggcgtatctgagggtgaggaaggcggtcgtcaccatccaggcctac
gctaaagggatgttcacacgcaggatttactgggagttcctcctgcatcacaaggccatg
atcatccagaagagcgtccgtggctggttgcagaggaagaagttcaaacgtgcacggaac
gctgccatcatcatccagtgtgcgttcagacgcatgcaagccaaaaaactactcaaagag
cggaagatcgaagctcgatcagcgcaacatctgaagaatctcaacacagggatggagaac
aagatcgtccagctgcagaggaaaatggacgaccagtctaaagaattaaaaactcagaac
gtgcagctgcagactgcgaacgtcagtatgggctcagaggtgaacaaactgcggaaggag
ctggagcaggtccggggtcagcgcggcgaaggaggtcagctgacgtccctgcaggacgag
ctggagaggctgaaggcggagctgcaggaggcgcacgctctcaggaagagactggaggag
gagcacggcagcgagaagatgagcctggaacagagggtggaggagctggagaaagaaaac
tctctgctgaagagtgagaaagaagaaatgaaccagaagatccttcagcagacgaagaac
tcccaagacatggacagcagtgtgtctcagacagaagtgtctcttcagaaagagctggac
gcagagaggcagagataccagaacctcctcaaagagatttccagagtggagcagaaatat
gaaaacctgaaggaggagctgtctctcaccaagttccagcccggccacatgaggaaccca
tccaaccagagcagcctggagtcggactcgaactacccgtcagtgtccacgtcggaggtc
ggcgacacagaggactctgtccagctggtggaggagatgggcgtggagaaagctgcgatg
gacatcagtctgttcatgaagctgcagaaacgagtgcgagagctggagcaggagaggaag
aggctgcagaccagtgtggacaagatggaggagctcgccaagcacaagagctctgagccg
aggagtcccacgtctgagctggaaattgcagatctggcctacaataacctgaagagagag
gagctggagtcagagaacaagaaactgaagaacaacctcaacgacctgaggaagtccatc
gctgagcgagcagctcaaaacaactcgtccaatgagctgcaggacggctacaacctgctg
ctgagtcagctcaaatcagccaatgaggagctggacgcccgcaaagaggagatgctcatc
ctcaggactcagatcgtcaaaaacgctcagctccaggagaagaaccaacaagttcagcaa
agtaataatgctccagaggctccagaggctccagaggttccagaggttactgaggttcca
gaggttactgaggttccagaggttcctgaggttactgaggttcccgaggacaaggaagag
gccctcaaggcgtatcaaggactgactgagtctaaaagtatccagcaggactggtgttat
ctgaatgaagatggagagctgggtttggcttatcaaggcctcaaacaagttgccaggctg
ttggaggctcagttgcagactcagtccaggcagcacaaagacgaactggaggctcttcac
actcagatcgagctgctgaaagccgacatcgagaagaagcaggagatcctcaactacacc
atgtccctgtcccctgaggcccaggtggattacagcgtccagcaggagatcacacgactc
accaacgacaacctggacctcaaggagctggtggagaaactggagaagaacgagaggaaa
ctgaagaagcagctcaggatctacatgaagaaagtccaggagttggaggcgtctcaggct
gcagctctgagcagcagatccagacctgaactgagtcgtcaggtgaccgtccagaggaag
gagaaggactttgaggggatgttggagtactacaaggaggatgaagctctgctggccaag
actctgatcacagacatgaagcccaacacggtgtcagcgaccgtcccctgcctgccggcg
tacatcctcttcatgtgcatccgccacgccgactacatcaacgacgacgagaaggtggag
tctctgctcacctccaccatcaactccgtcaagaaggtcctcaagaaaaacagcgatgac
tttgagacgacgtccttctggctggccaacaccagtcgtctgcttcactgcctgaagcag
tacagcggtgacgaggtcttcatgacgcagaactcgcccaaacagaacgaacactgtctg
aagaactttgacctggcggagtacagacaggtgctgagcgacctctccatccagatctac
cagcagctcatcaaagtggcagaaggcatcatacagccaatgatcgtgtccgccatgttg
gagagtgagagcatccccagcctggcgggcgtgaagccgatgggctacaggaaccgttcg
tccagcatggacactgacggccccagcagctacactctggaggccctaatcaggcagctg
ggacaatttcacagtatcatgagggaccacggtctggaccccgagatcgtgggtcaggtg
gtccgacagctgttccactgcatcaacgctgtcacgctcaacaacctgctgctacgcaaa
gacgtctgctcctggagcacgggcatgcagctcagatacaacaccagtcagttggaggag
tggctcaggggaaataacttgtatcagagtaaagctgcagcgattctggagccggtcatt
caggccgctcagctgctgcaggtgaagaagaagacgtctcaggacgccgaggccatctgc
tcgctctgcattgccctcaccacgcagcagattgtgaaagtcctgaacctctacacgcca
ctgaacgagtttgaggaacgagtcacggtgtcgttcatcagagacattcagactcgtctt
caggtgagaaacgatcctcctcagctcctgatcgacaccaaacacaccttccccgtcctc
ttcccgtacacgccctccgctctcagcctggagacgctgcacatccctgcctcgctcggc
ctcgacttcctcgtcagagtctga
DBGET
integrated database retrieval system
