Hippoglossus stenolepis (Pacific halibut): 118125879
Help
Entry
118125879 CDS
T08308
Symbol
hpse
Name
(RefSeq) heparanase isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00531
Glycosaminoglycan degradation
hsp01100
Metabolic pathways
Module
hsp_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118125879 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118125879 (hpse)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
118125879 (hpse)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Enzymes
118125879 (hpse)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
118125879
NCBI-ProteinID:
XP_035040828
LinkDB
All DBs
Position
18:complement(1072179..1077930)
Genome browser
AA seq
547 aa
AA seq
DB search
MSLLLLFLLFLLRLSDGLLFTRDPGWVASDPGWNSTGSGSQLVSVTADLSSILHRVDPRF
LSVTIDSSLGTEESFMYLLRSQKIRTLAKALTPSFLRFGGTRQDFMVFTPERKHLQTSAP
SCDEVALPSWLEDKLKVEWTTQQLVLMREDAQRKYRNVKFTEVTVDLLNSFSNYSGMDLI
FGLNALLRTADNSWNSSNARSLLQYCESRGYAMSWELGNEPNSFEKKAGIRVDGYQLGQD
FTRLREMMSESKFYHGAGLYGPDVGQPRGHRIDILEGFLQSGADAVDACTWHHYYVNGRD
TSLEDFLDPEILDTLKLKTKEVLQKVKMASPGKAVWLGETSSAYGGGAVGLSDAFVAGFM
WLDKLGLAATLGMDVVMRQVLIGSGSYHLVDNNLDPLPDYWLSLLYKRLVGPEVLKIEAS
SAVGRSKRVRVYLHCSNTKSYSSGAVTLISMNLSEKPARISTPALVSSGTVEAFVLQADR
PGEEGLYSRSVKLNGDVLKMVDDKTLPDLKGSRLPPADHLQLPAYALAFFVFTDARAAAC
HDPGRLR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctgctcctcttcctcctctttctcctccgtctctcggacggactcctcttc
accagagacccgggctgggtcgcctccgacccggggtggaactcaaccggctccgggtct
cagctcgtctccgtcaccgcggatctgagctccatcctccaccgggtggacccgaggttt
ctgtccgtgaccatcgactccagcctggggaccgaggagagcttcatgtacctgctgaga
tcccagaagatcaggacgttggccaaagctctgactccctcgttcctgaggttcggtgga
acgagacaagacttcatggttttcactcccgagaggaaacatctgcaaacatcagctccg
tcctgtgatgaagtggcgttgccgtcgtggttggaggacaaactgaaggtggagtggacg
acgcagcagctggtcctgatgagagaagatgctcagaggaagtacaggaacgtcaagttc
acagaggtgaccgtggacctgctgaactccttctccaactattcggggatggatctgatc
ttcgggctgaacgctctcctcagaacagccgacaacagctggaacagcagcaacgctcgc
tccctgctgcagtactgcgagtccagaggctacgccatgtcctgggagctggggaacgaa
ccaaacagtttcgagaagaaggccgggatccgagtggacggatatcagctcggacaggac
ttcacccgtctccgagagatgatgtcagagtccaaattctaccacggcgccggactgtac
gggccggacgtgggccagccgcgaggccacaggatcgacatactggaggggttcctgcag
agcggagcggacgccgtcgacgcctgtacctggcaccattactatgtgaacggcagagac
acgtctctggaggattttctggatccagagattctcgacacgctgaagttaaagaccaaa
gaagttctgcagaaagtaaagatggcgtccccggggaaggcggtctggctcggagagacg
agctcggcgtacggaggaggagccgtgggtctgtccgacgcgttcgtcgcaggattcatg
tggctggacaaactgggcctggcagccacactcggcatggacgtggtgatgaggcaggtg
ctgattggttcaggaagttaccacctggtcgacaacaacctggatccacttcctgactac
tggttgtctcttctctacaagagactcgtgggaccggaggttttgaagattgaggcgtct
tctgctgttggccgcagtaaaagagtgagagtgtatctgcactgctccaacacaaagagc
tacagcagcggagcagtcacgttgatatctatgaacctgagtgagaaaccggctcggatc
tcgactccggctctcgtctcctccggcacagtggaggcttttgtcctgcaggccgaccgg
cccggggaggaggggctctactccaggtctgtgaaactgaacggggacgtgctgaagatg
gtggacgataaaactctccccgaccttaaaggaagtcgtcttcctccagcggatcacctg
cagcttcctgcctacgctctggccttcttcgtcttcaccgacgctcgagccgccgcctgt
cacgaccccggacgcctgcgatga
DBGET
integrated database retrieval system
