Hippoglossus stenolepis (Pacific halibut): 118125903
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Entry
118125903 CDS
T08308
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118125903 (vldlr)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118125903 (vldlr)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
SGL
Motif
Other DBs
NCBI-GeneID:
118125903
NCBI-ProteinID:
XP_047200415
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Position
18:complement(2063602..2091719)
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AA seq
872 aa
AA seq
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MVRSTPGGDVAPSTPGILLLLLLCLHSTGTVHGTKTECEASQFQCGNGRCIPSIWQCDGD
EDCADGSDESSCVKKTCAEVDFVCQNGQCVPKRWHCDGEPDCEDGSDESLEICHMRTCRV
NEFSCGAGSTQCIPVFWKCDGEKDCDNGEEEVNCGNITCAPNEFTCASGRCISRNFVCNG
EDDCGDGSDEVECAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTP
PAKCSSSEMQCLTGECIHKKWRCDGDPDCKDGSDEANCPVRTCGLDQFKCDDGNCITGSR
QCNGVRDCVDGSDEANCKNMTQCNGPDKFKCRSGECIEMNKVCNKARDCPDWSDEPIKEC
NVNECLMNNGGCSHICKDMVIGFECDCSPGLQLIDHKTCGDINECVNPGICSQICINLKG
GYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALD
ADFNQQTIFWADLGHKAIYSTMLDRRGDVGTHIKVIDNVQTPVGIAVDWIYKNLYWSDLS
TKSISVSNYNGTKQKVLFSRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQV
LVANDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKILQSSDYLAHPFALTVF
EDRVFWTDGENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCSERGENG
GCSYMCLPAPQINKHSPKYTCVCPGGQELAADGLRCRPDPPPKGPSKDDGKALVQPPPEA
NVSTSIQLNSTARGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTT
EEDLNIDITRHGANVGHTYPAISIVSTEDDLS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggtccggtccacaccgggaggagacgtggccccgtccaccccggggatcctcctgctg
ctgctcctgtgtctccacagcaccggcaccgtgcacggtacgaagacagaatgtgaggcc
agccagttccagtgtggaaacggccgctgcatcccgtccatctggcagtgcgacggagac
gaggactgcgccgacggcagcgacgagagctcctgtgttaagaagacgtgtgcagaggtg
gactttgtgtgtcagaacggccagtgtgtcccgaagaggtggcactgcgacggggagccg
gactgcgaggacgggtcggacgagagtctagaaatctgccacatgaggacgtgtcgcgtg
aacgagttcagctgcggagccggatccacccagtgtatccccgtcttctggaaatgtgac
ggagagaaggactgtgacaacggagaggaagaggtcaactgtggtaacatcacctgtgct
ccgaacgagttcacgtgtgccagcggccgctgcatctcacggaactttgtgtgtaacggc
gaggacgactgcggcgacggctccgatgaggtggagtgcgcgccgtcctcctgcggcccc
agcgaattccagtgtgggaactcctcgtgcatcccggccagctgggtgtgcgacgacgac
gtggactgccaggaccagtcggacgagtccccgtctcgctgcggccgtcacccgacgccg
ccggccaagtgttcgtccagcgagatgcagtgtctcacaggggagtgcatccacaagaag
tggaggtgcgacggagaccccgactgcaaggacggcagcgacgaagcaaactgtcctgta
cgcacatgtggattggatcagttcaagtgtgatgatggaaactgcatcacaggcagtcga
cagtgtaacggagtccgagactgcgtcgatggatccgatgaagccaactgcaaaaacatg
actcagtgtaacggaccggacaagttcaagtgtcgcagcggggagtgcatcgagatgaac
aaggtgtgcaacaaggcccgagactgtcccgactggagcgacgagcccatcaaggaatgc
aatgtaaacgagtgtctcatgaataacggcggctgctcacacatctgtaaagacatggtg
atcggcttcgagtgcgactgctcgcctggactgcagctcatcgaccacaagacctgcgga
gacatcaacgagtgtgtgaaccccggcatctgcagccagatctgcatcaacctgaagggg
gggtacaagtgtgaatgccacaacggctaccagatggacccgaccaccggagtgtgcaag
gccgttgggaaggagccctgcctcatcttcaccaaccggcgggacatccggcgcctgggt
ctggagaggaaggagtacactcagatcgtggagcagcagagaaacacggtggctctggac
gcagacttcaaccagcagaccatcttctgggccgacctcggccacaaggccatatacagc
accatgctggacagacgaggggacgtcggcacccacatcaaagtgatagacaacgtccag
acccccgtgggaatcgccgtggactggatctataagaacctgtactggtctgatctcagc
accaaaagcatctcggtttccaactacaacggaaccaagcagaaggttctgttcagccga
ggcctcaaagaaccggcgtccatcgccgtggatccgctgtctgggtttctttactggtct
gactggggcgaacctgccaagattgagaagtctggtatgaacggcgtggacagacaggtt
ctggtggcgaacgacatccagtggcctaatggaatcactctggatctgatcaaaggcagg
ttgtactgggtcgactcgaagctgcacatgctctgcagcgtcgacctgaacggagacaac
aggaagaagatactgcagtcctccgactacctggcgcatcccttcgctctcacggtcttt
gaggatcgagttttctggaccgacggtgaaaacgaagccatctacggtgcgaacaagttc
accggctccgacgtggtgacgctggccagcaacctgaacgacccccaggacatcatcgtc
taccacgagctcatccagctgtcgggtacaaactggtgctcagaaagaggagagaacggc
ggctgtagctacatgtgtctgccggcaccgcagatcaacaagcactcgcccaagtacacc
tgcgtgtgtccgggggggcaggagctggctgctgacggcctgcgctgccgacccgaccct
cctcctaaaggtccctcaaaggatgatgggaaagctctggtgcagccgccgccagaagcc
aacgtgagcacgtcgatccagttgaactccacagccagaggttctgcagcagcctgggcc
atcctgcccgtcttgctgctggcgatggcggcggcgggcgggtacctgatgtggagaaac
tggcagctgaagaaccagaagagcatgaacttcgacaaccccgtctacctgaagaccaca
gaagaagacctcaacatcgacatcacccggcacggcgccaacgtgggacacacctaccct
gcgatttccatcgtgagcacagaagatgatttgtcctga
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