Hippoglossus stenolepis (Pacific halibut): 118125910
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Entry
118125910 CDS
T08308
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118125910 (tmc2a)
03037 Cilium and associated proteins [BR:
hsp03037
]
118125910 (tmc2a)
Transporters [BR:
hsp02000
]
Other transporters
Pores ion channels [TC:
1
]
118125910 (tmc2a)
Cilium and associated proteins [BR:
hsp03037
]
Other cilia and associated proteins
Stereociliary proteins
118125910 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
118125910
NCBI-ProteinID:
XP_047200449
LinkDB
All DBs
Position
18:complement(2510101..2517629)
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AA seq
950 aa
AA seq
DB search
MPRKSEVVQMDDVGIDVDGDLSDSDDGATQRRGNRRPAAGRGGAKGRGRGKKPASEDEED
EEEDEAPRGRRGANRKKPAKKRGGKDDDDEDESEDEAPKRKRGGAANKRRGGKAQDGDEE
DSDDGKGKKGKKGGGRKGGKEEESKGKKGDAKGKDKGKDKGKDKEDDKDKKKKKKRSSSS
SSNSSSDSDEEESMSEGEMGRLMEEVEEKKKLIATIRNKPWRMKRRLTHLREAQQFVDKF
EGALGKGKGRKWYAYKVMMTKKWIKFQRDFENFRTACIPWERKIKEVESHFGSSVASYFI
FLRWMYGMNLVLFGFTFGLVVIPEVLMGLPYGSIPRKTVPRAEQPTAQDYSVLMDFNGYC
KYSVLFYGFYNDQRTIGLLKFRLPLSYLMVGIGSFGYSLMVVIRTMAKNADVGGGDGEEG
EFTFAWKMFTSWDYLIGNSETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLAN
FMILCSLGGSGYLIYFVVKRSQEFASRTDLSWYEKNELEIIMSLLGLVCPPLFETIAELE
DYHPRIALKWQLGRIFALFLGNLYTFLFALFDEVNNKLEQEDSIRNASLWAVKEYYANFT
RYINDSEVTPPPMDPSDIIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRF
LNYCWCWDLEAGFPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQ
CWAVMATNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKPK
MFDVIMETIDLDLPAFLGTLFSYAANPGLIIPAVLLMVLAIYYLNSVSEAYMNSNMELKK
KMQMARDEEKNRRNNTDSTNQVMKDLEDLLPNGSLAPPAPPPQPEKPPEQEPRPTRTKPG
KGVNLQKDVTLASPNPNAQRPVSRPPGPRGAGPMPGPGRGRGRGRGAPPR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaaaagtgaggtggttcaaatggacgacgtcgggatcgacgtcgatggagat
ttgagtgacagtgacgatggcgccacccagaggagagggaacagaagaccggcggctgga
agaggaggtgcaaagggaagaggccgaggcaagaaaccagccagcgaggacgaagaagac
gaggaggaagatgaagctcccaggggacgcagaggtgcaaacaggaagaagcccgccaag
aaacgtggcggcaaggacgacgatgatgaagacgagagcgaggacgaagcgcccaagagg
aaacgaggaggagcggccaataagagaagaggaggcaaagctcaggacggcgatgaggag
gatagtgatgatgggaaaggaaagaagggaaagaagggaggagggaggaaaggagggaag
gaggaggagagtaagggtaagaagggggacgccaaagggaaggacaaggggaaggacaag
gggaaagacaaggaggacgacaaggacaagaagaagaagaagaaaaggtcctcctccagt
tcatccaactccagctccgactccgacgaggaggagtccatgtcagagggcgagatgggc
cgactgatggaggaggtggaggagaaaaagaaactgatcgccacaatcaggaacaagccg
tggaggatgaagcggcgcctcacgcacctcagggaggctcaacagtttgtggataagttc
gaaggcgctctggggaaaggaaaagggaggaagtggtacgcctacaaagtgatgatgaca
aagaaatggatcaagtttcaaagggattttgagaatttccggacggcctgtatcccctgg
gagaggaagatcaaggaggtggaaagtcactttgggtcctcggtggcgtcttacttcatc
ttcctgcgctggatgtacggcatgaacctcgtcctgttcggcttcaccttcggcctggtg
gtcatccccgaggttctgatgggacttccctatggttcgattcccaggaaaactgtcccc
agagcagagcagcccactgctcaggactactccgtcctcatggacttcaatggctactgc
aaatactccgtcctgttctacggattttacaacgaccagaggaccatcggcttgttgaag
ttccggctgcctctgtcctacctcatggtcgggatcggcagcttcggctacagcctgatg
gtcgtgattcgcacaatggcgaagaacgctgacgtcgggggtggagacggggaggaagga
gagttcacatttgcctggaagatgttcaccagctgggattacctcatcggcaactcagag
accgccgacaacaagtacgcctccatcaccaccagcttcaaggagtcgatagtggacgag
caggagaaccagaaggacgagaacattcacctgcggaggttcctcagggtcctggcgaac
ttcatgatcctctgcagcctcggcggcagcggctacctcatctactttgtggtgaagagg
tctcaggagttcgcctccaggaccgacctcagctggtacgagaagaacgagttggagatc
atcatgtctctgctgggtctggtgtgtcctcctctgtttgagaccatcgctgagctggag
gactaccaccctcgaatcgccctcaagtggcagctgggacgcatcttcgccctcttcctg
ggaaacctctacaccttcctgttcgctctgttcgacgaggtcaacaacaagctggaacaa
gaggactccataaggaacgcctccctctgggccgtgaaggaatactacgccaacttcacc
cgttacatcaacgactccgaggtcacccctcctcccatggatccgtctgacatcatccga
ggaccctgctgggaaactgccgtcggcattgagtttgtgaagctgacggtgtcggacatc
caggtgacctacctgacgattctgatcggagacttcgccagagccgtcatcgtccgcttc
ctgaactactgctggtgctgggacctggaggccggatttccgtcgtatggagagttcgac
atcagtggaaatgttctcggattagttttcaatcaagggatgatctggatgggggctttt
tacgctcccgggctggtcggcatcaacgtgctccgcctcctcagctccatgtactaccag
tgctgggccgtgatggccaccaacgtcccccacgagagagtcttcaaggcctccaagtcc
aacaacttctacatgggtctgctgctcctcatcctcttcctcagtctgctgccggtggtc
tacaccatcatgaccctgccgccctcgttcgactgcggacccttcagcgggaagcccaag
atgttcgacgtgatcatggagacgattgacctggacctgcccgccttcctggggacgctc
ttcagctacgcagccaacccgggcctcatcatcccagctgtgctgctcatggtactggcc
atctactacctgaactccgtgtctgaggcctacatgaactccaacatggagctgaagaag
aagatgcagatggcccgggacgaggagaagaaccggaggaacaacacagacagcaccaat
caggtcatgaaagacctggaggacctgctgcccaacggctccctcgcccccccggctcct
ccaccacagcctgaaaaaccaccggagcaagaaccaaggccgaccaggacgaagcccggt
aaaggagtcaacctgcagaaagacgtgactctggcatcacccaaccccaacgcccagagg
ccagtgagtcggcctccggggcccagaggagcggggccgatgccgggtccaggccggggc
cggggccgcggcagaggggcccctccgagataa
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