Hippoglossus stenolepis (Pacific halibut): 118125959
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Entry
118125959 CDS
T08308
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118125959
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118125959
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
118125959
NCBI-ProteinID:
XP_035040954
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All DBs
Position
18:complement(7754156..7818183)
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AA seq
1091 aa
AA seq
DB search
MDDKVSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMDPSVADAGHGPGTGMDSLGVGGRSPLPTTASPVAPGSDPL
SSSPPKLEIVLPVQTAQESELNERSYRGDESSSDGSPGSPIPDEDSVVFSQLTYLGCASV
NAPRSEVEALRMMSILRGQCQVPLDVTLSVPGVSEGTVRLLDPNNSTEIANYPIYKILFC
VRGHDGTPESDCFAFTESHYNAEIFRIHVFRCQIQEAVSRILYSFATAFRRSAKKAILSS
QQAAPLTPDSDLFTFTVSLEIREDDGKGTFSAVAKDKDKQSFKLRAGMDKKIVIYVQQTS
NKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQAVNE
ETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRSYTETFYLKLR
QMERKERKSPASDTLYEVVSLESENEREKRKTTASPGIVPTGPGTGVPSPPEDDEEEDND
EPLLSGSGDVSKECAEKILETWGELLSKWHLNLSVRPRQLPALVRSGIPEALRGEVWQLL
AGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYS
VYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLE
RLMQEYISDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNV
ALALLKTSKDDLIQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSIKISQKKLKKFEK
EYHTIREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEE
KADALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQ
ICSQLSERLEKQQTSTRGELEKIRSKVEGCEKCSSLFNKEGRVRAAVSTAPGGGSEETDE
EKEALKSQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIK
TVTGTQGKETA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaagtctcggtggggaagattagcgtctcctcggactcagtgtccactctc
aacagtgaggactttgtccttgtgtcccgcctgggggacgagacaccctcctccactaat
aatggtagtgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaatggaagtgaacagcagctccagagggagttagaggatgtcctaatg
gacccatcggtagctgacgctgggcacggaccgggaacaggaatggacagcttgggtgta
gggggccgtagccctctccccacgacagcgtcaccagtagcgccaggctctgaccctctg
agttcatccccgcccaagttggagatagtgctgcctgttcagacggcacaggagagtgag
ctgaatgagagatcgtatcgcggagacgaatcatcatccgatggcagtcccggcagtccc
attccagatgaggacagcgttgtgttcagccagctgacatatctggggtgtgcatcggtc
aacgccccccgcagtgaggtggaggcccttcgtatgatgagtatcctcagagggcagtgc
caggtccccctggatgtcaccctatctgtgccaggcgtgtctgaaggcactgtcaggttg
ctggaccccaacaacagtacggagattgccaactaccctatctacaagattctgttctgt
gtgcgcggccatgatggtactccagagagtgactgcttcgccttcactgagagccactac
aatgctgagatcttcaggatccatgtgttccgctgtcaaattcaagaggcggtcagtagg
atattgtacagctttgccacagcgtttcggcggtcagcgaagaaggctattctgtcatct
cagcaggctgctcctctcacccctgacagtgacttgtttaccttcaccgtcagcctggag
atcagggaggacgatggcaagggtaccttcagcgctgtagcaaaggacaaggacaagcag
agcttcaagctgcgcgcagggatggacaagaaaatagtgatttatgtccagcagacttcc
aataaggagcttgccattgagaggtgctttggtcttctgctcagcccagggaaaaatgtg
aagaacagtgacatgcacctgctggacctggagtcaatgggaaagagctctgacgggaaa
tcttacatcatcacaggaagctggaaccccaacacgcctcagttccaggctgtgaatgag
gaaacgcccaaagataaattcatgtacatgacgacagcagtggacctggtcatcacagag
gtggaggagccggtccgcttcctgctggagacgagggtcagagtgtgctcgcccaatgac
aggctgttctggcccttcagcaagcggagctacactgagaccttttaccttaaactccgc
cagatggagcgtaaggagcgcaagagtcctgcctccgacacactctatgaggtggtgagt
ttggaaagtgagaatgagagggagaaaaggaagaccacggctagtcccggcatcgtgccc
actgggcctggtaccggggttccttcaccacctgaggatgatgaagaagaagataacgac
gagccgctactcagtggatcaggtgacgtttccaaggagtgtgcagagaagatcctggaa
acctggggagaattactatctaagtggcatttgaacttatcagtgcggcccaggcagctg
ccagcgttggtgcggagtggtattcccgaagctcttcgtggggaggtgtggcagctcctg
gcagggtgccacaacaatgaccaccaggtggaagagtaccgcactctaatcacaaaggag
tctccccaggacagtgccatcaccagagacattaataggacattcccagctcatgactac
tttaaagacactggaggagatggacaagactcgctctacaagatctgcaaggcgtactct
gtttatgacgaggagattggatactgccagggacagtccttcctggctgccgtgctgctg
ctgcacatgccagaggaacaagctttcagtgtcctggtcaagatcatgtttgattacggg
ctcagggatcttttcaagcagaactttgaagatctacattgcaagttcttccagcttgag
aggctcatgcaggaatatatatcagacctttacaaccatttcctgaacgtgggtctggaa
gctcacatgtacgcctctcagtggttcctcaccctcttcacagccaagttccctctttac
atggtcttccatatcatcgacctgctactgtgtgagggcatcagcgtgatcttcaatgta
gccttggcacttctgaagacatcaaaagatgatctgatccagacagacttcgagggcgca
ctcaagttctttcgcgtcccggtgccaaagaggtaccgctctgaggaaaatgcaaagaag
ctgatggagctggcctgtagcataaagatcagccagaagaagctgaagaaatttgagaag
gagtatcacaccatcagggagcagcaggagcagcaggaggcccccatcgagagatacgag
agggagaaccgtcgtttgcaagaggcgaacatgcgtctggagcaggagaacgacgacctg
gcacacgaactcgtcagcagcaagatagctctgcgcaaagaccttgacaacgccgaggaa
aaggcagacgccctgaacaaagagttgctgctgactaaacagaaactcgtggactctgag
gacgagaagaggcgactggaggaagagtctgcacagctgaaggagatgtgccgacgagag
ctcgataaatctgaatcagagattaagaagaacggctccatcattggagaatataagcag
atctgctcccagctgagcgaaagactggagaaacaacagacatccacccgaggagagctg
gagaaaatccggtccaaagtcgaaggctgtgagaagtgcagcagcctcttcaacaaagag
ggtcgtgtgcgggccgctgtgtccacggcgcctggcggagggagtgaggagaccgacgag
gagaaggaggctttgaagagccagctgagggagatggagctggagcttgctcagaccaaa
ctgcagctggtggaggctgagtgcaaaatccaggacttggagcatcacttgggtctggcc
ctcaacgaggttcaggccgccaagaagacctggttcaaccggacgctcagctccatcaaa
accgtcactgggacccaggggaaggagaccgcctaa
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