Hippoglossus stenolepis (Pacific halibut): 118125981
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Entry
118125981 CDS
T08308
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03420
Nucleotide excision repair
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118125981 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
118125981 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hsp03051
]
118125981 (rad23b)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118125981 (rad23b)
Proteasome [BR:
hsp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118125981 (rad23b)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118125981 (rad23b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Crinkler
Rad60-SLD_2
UBA_3
Dsc3_N
Metal_resist
CUE
OTU1_UBXL
EAD1
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
118125981
NCBI-ProteinID:
XP_035040985
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All DBs
Position
18:11879194..11886631
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AA seq
386 aa
AA seq
DB search
MLITLKTLQQLTFKIDIDEEETVKTLKERIEQEKGKEIFSIAGQKLIYAGKILNDDTALK
EYKIDEKNFVVIMVTKPKTASATPQPSPSPSTSAPTSTAPAAPAASSSVSENTIERSSTD
EKPEERRSSTAEPASSPVGSSEASTNTNLLNEAVSNLVTGPSYDAMVNEMMLMGYEREKV
VAALRASFNNPDRAVEYLLTGIPGRDQGNVTGSDAVVPPVSGISAASTGGIIVPANTGSS
GAGANPLSFLRSQPQFHVMRQLIQQNAALLPALLQEIGRENPELLQEISSHQEQFIQMLN
EPNPEAVPVSGEGGSGGGSGGAGGMGVSSPGGSHTSYIQVTPQEKEAIERLKALGFPEGL
VIQAYFACEKNEDLAANFLLQQTFDD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttgataactttgaaaaccctacaacagctgacgtttaaaatcgacatcgacgaggag
gagacggtgaagactttaaaagagaggatcgaacaggagaagggaaaggaaatattttcc
attgctggacagaagctgatctatgccggtaaaatcctcaacgatgacacggccctcaag
gagtataaaatcgatgagaagaactttgtggtcatcatggtgacaaagcctaaaacagcc
tcggccaccccacagccttcaccctcgccttccacttcagctcccacctccacagctccc
gcagcacctgctgcctcttcgtctgtctcggaaaacacgatcgagcgctcctctacagat
gagaaaccagaggagaggcggtcctccactgctgaaccggcttcctccccagtcggaagc
tctgaggcatcaacaaacacaaacctacttaatgaggctgtttcaaatctagtaactggc
ccgtcatatgatgccatggtgaacgagatgatgctcatgggctacgagagggagaaggtg
gtggcagctctgagagcgagcttcaacaacccagacagagctgtggagtacctgcttacc
gggatcccgggcagggatcagggcaatgtgaccggttctgatgcggtggtgcctccagta
agcggaatttcagctgcatcgacaggcggtattatcgtcccagccaacactggctcttca
ggtgctggagccaatcccctgagtttcctgagaagtcagccccagtttcatgtgatgcga
cagctgatccaacagaacgccgccctgctcccggctctgctgcaggagatcggcagagaa
aaccccgagctgttgcaggagatcagcagccaccaagagcaattcatccagatgctgaat
gagcccaatccagaggctgtgccagtcagtggcgaaggtggatccggaggtggatctgga
ggagccggaggaatgggggttagctcacctggcggaagtcacaccagctacattcaggtc
acgccgcaggagaaggaggccatcgagaggctaaaagccttaggatttccagaaggactt
gttatacaagcgtactttgcttgtgagaagaacgaggacttggccgccaacttcctttta
caacagacctttgatgattga
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