Hippoglossus stenolepis (Pacific halibut): 118126005
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Entry
118126005 CDS
T08308
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118126005 (erbin)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_13
PDZ_6
LRR_5
PDZ_2
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
118126005
NCBI-ProteinID:
XP_035041020
LinkDB
All DBs
Position
18:complement(16071594..16126684)
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AA seq
1413 aa
AA seq
DB search
MSKRSLFVRLVPCRCLRGEEETVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEEL
PKQLFNCQLLHRLSMPDNDLTVMPAAIANLINLRELDVSKNSIQEFPENIKNCKVLTIVE
ASVNPISKLPDGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQ
KLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGMIGMLKQLVYLDVSKNN
LEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLHIL
EELDCSFNEIEALPSSVGQCVCIRTFAADHNFLTQLPPEMGNWKNATVLFLHSNKLESLP
EEMGDMQRLKVINLSNNKLKNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKTV
LTNYMFPQQTRTEEYIPSSDSESFNPALWEEQRKHRAQVAFECDEDKDERETPPREGNLK
RYPTPYPEELKNMVKTAQSVAHRLKEDESSDESGKERNHIGVQDVGVKVIEAPCPNGVAT
DKAPHVSANIYAQNPSAPDSKDASDTSYSSHRVPLKSSEGSMMNHEDTLEDSEELSDEEE
EMKIAEMRPPLIEISINQPKVVTLSKDKKDDGKDADSLLDDTVANSNQNNSNCSSPSRMS
DSVSLTTDSSQDNSLCTPEREAKMPFLPKSRQEDENMNQPKDTTPLLHNGNGSETSLQAL
LKTQQTPPEKMGDYDLSMEARLAFIEKGINNGMEDTYTKWDQINMNISKLPTDNMLQLDE
VDKTKNGSVTREELGGKQTFSNDNLEHLQNGNQQVGDRFNSLGNKSQAVRAEPSAVHVAS
TGVTASSDMSLSRSTEELSPDKRCHPPQVMKSHSVSNMETGGMRLFSFEGDDEAYEAAAM
SWMAGAGPGPGAQGQSIVRSKSASQLLNDQSLQVYPSSSASSSDLLSCSKPPASTSRYPI
SSSMAMGIAPPQYNIQYTSSAIPKESMWTQRTAMPPEHQGYLPPPPHSLANTNYSNRNQA
PPFPQQQQQRGPPMAPKPSGDMWAMERLHSTGSQPRSSTLQRQSSTASTASMGDPRRMQL
PDGEYMTYRDIHTLARGPLAMSQAAQRPLSARTYSIDVPGASRPLIARPQPHELPERTMS
VCDFNYQHSSPSKRPNTRVKSEYSLLDGPGAGVGAARVPQDWRDQVMRHIEAKKIEKNAL
SRSYNSNNAPLSWSHYGSCRDMHASQGSLVFSPREGQPYGALGFCDDVYSPQGQQSYTLD
PHRKVPLLNGQMGPAGRPQMTQVTQMPMARHPSREQLIDYLMLKVSQPQAPPRVPQEAMQ
QEFRVKVEKNPELGFSISGGVGGRGNPFHPDDNGIYVTRVQPEGPAAKILQPGDKIIQAN
GYSFVNIDHGNAVSLLKTFPSTVDMIIFREMQA
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggagcttgtttgttcgtctggtgccctgccgctgcttgcggggtgaggag
gagacggtaacatcgctggactactcccactgcagcctggagaccgttcctaaggagatc
tttagctttgagaagaccctgcaggaactctatctcgatgccaaccagatcgaggaactg
cctaaacaactgtttaactgccagttactacaccggctgagcatgccagataatgacctt
acagtgatgccagcagcgattgcaaacctcatcaatctcagggagcttgatgtcagcaaa
aacagtatccaggagtttccagaaaacatcaagaactgcaaagtcctaactattgtagaa
gccagtgtgaatcccatatcaaagctcccagatggcttcacgcagctcctgagtctgtcg
cagctctacctgaacgatgcctttttggagttcttaccagccagctttggcaggttgaca
aaattacagatcttggagctgagggagaaccaattaaagatgttgccaaaaagcatgcag
aagctcacgcagctggagaggctggacctggggagtaatgagttcactgaagtgcctgag
gtgttggagcagctgactggaatcaaggaactgtggatggatgggaacagactgacgttt
ttacctgggatgattgggatgctgaaacagctggtctacctggacgtgtccaagaacaac
ctggagatggtagatgagcaaatctgcggctgtgagagtctgcaggacctcctgctctcc
aacaatgccctcacacagctgccaggctccatcggctcgctgaagaaactgactgcactg
aaagtggatgagaaccagctgatgtacctaccagactctgttggagggctgcacattctg
gaggagctggactgcagtttcaatgagattgaagccttgccgtcttctgtcggccagtgt
gtttgcattcgcacctttgcagcagatcacaacttcttgacccagcttcccccggagatg
ggcaactggaagaacgcaactgtgctgtttctacattccaacaaactggagtcattgcct
gaggagatgggagacatgcagaggctcaaagtcatcaatctaagcaacaacaagttgaag
aatcttccttacagtttcactaaactgaaccagatgacagcaatgtggctgtctgaaaat
cagtcaaagcccctgatccctctgcagaaagaggaggatccagagacgcacaaaactgtg
ctgactaactacatgttcccccagcaaaccaggacagaggagtacattcccagctctgac
tcggagagcttcaatccggcgctgtgggaggaacaacgcaagcaccgagctcaggtggcc
ttcgagtgtgacgaggacaaggatgagagagaaacgccaccgagggagggaaacctgaag
cgctaccctacaccatatccagaggagctgaagaacatggtgaagacagcccagtctgtg
gctcacaggctgaaggaggatgagtcaagcgacgagtcggggaaagagaggaaccacatt
ggtgtgcaggacgtgggtgtaaaggtgatagaggccccgtgccccaacggcgtggcaaca
gacaaagcgccccatgtatctgccaatatatatgcccaaaatccctctgcaccagattct
aaagacgcttcagacacgtcttacagctcccacagagtcccactgaaatcctcagagggc
tccatgatgaaccacgaggacacacttgaggattctgaggagctgtcggatgaagaagag
gaaatgaaaatagcagagatgagaccccctcttattgagatctccatcaaccagccaaaa
gtagtgacgttaagtaaggacaaaaaagatgatgggaaagatgcagactctttgctggat
gacactgtggccaacagcaaccagaacaatagtaactgttcatccccatcacgcatgtcc
gactcagtgtctctgaccacggacagcagccaggacaactctctgtgtacccctgagaga
gaagcaaagatgcctttcctcccgaaaagccggcaagaagatgagaacatgaaccagcct
aaagacaccacccctctcctccataatggtaatggctctgaaacgtcccttcaggccctt
ttgaaaacccagcagacgccaccagaaaaaatgggcgactacgacctgtcaatggaagcc
agactggccttcattgagaagggaatcaacaatggcatggaagacacctacaccaagtgg
gaccagatcaatatgaacatttccaagctgccaactgacaacatgcttcagctggacgag
gtggacaaaaccaagaatggttccgtaacccgggaggagttgggcggaaagcagactttc
agcaatgacaacttggagcatttacagaatggaaaccagcaggtcggtgaccgcttcaac
agtctggggaacaaaagtcaagcagtgagagcggagccatctgccgtgcatgtggcctcg
acaggcgtgacagccagcagtgacatgtctctgtctcgcagcacagaggagctgtctcca
gacaaaaggtgccatcccccacaggtgatgaagtcccacagtgtcagtaacatggaaaca
gggggcatgaggctgttctcctttgaaggggatgatgaagcatatgaggcagcagcaatg
agctggatggcaggagccggtccggggccaggagctcagggccagagcatagtcaggagc
aagtcagccagtcagttactcaatgaccagagtctccaggtctaccccagctcctctgca
tcttcctcagacctgctctcctgctccaagcctcctgccagcaccagcagatacccaatc
tcctccagcatggccatgggcatcgctcctcctcagtacaatattcaatacacaagcagt
gccataccgaaagagagcatgtggacccagaggacggccatgcccccagagcaccagggc
tacctccctcctcctccacactcactagccaacaccaactactccaatcgtaatcaggca
cctcccttccctcaacagcaacagcaaagggggcctcccatggctcctaaaccctctggg
gacatgtgggctatggagagacttcattctactggcagccagcctcgcagcagcactctg
cagaggcaaagtagcaccgcctccacagcttcaatgggtgacccaaggcgcatgcagttg
cccgatggggaatatatgacttacagggacattcacaccctcgccaggggcccgctggca
atgagccaggccgcgcagaggcccctgtcagctcgcacttacagtatcgacgtacccgga
gcttccaggcctctcattgcgaggccacagccccacgagcttccagagaggaccatgtcc
gtctgtgatttcaactaccagcacagcagccccagcaaaaggcccaacaccagggtgaag
tctgagtactcgctcctggatggccctggagcgggagtgggagcagcaagagtgccgcaa
gactggagagatcaggtgatgcgtcacatcgaggccaagaaaattgaaaagaatgcgctg
tctcgctcctataattccaataacgctccgctgagctggtctcactacggcagctgtagg
gatatgcatgccagccaagggtctctggtctttagtcccagagagggacagccgtatgga
gctctgggcttctgtgatgatgtgtatagtccacaagggcagcagagctacaccttggac
ccccacagaaaagtgcctttgttgaacggtcagatgggacccgctggtcgtcctcagatg
acccaggtgacccagatgcccatggctcgccacccttccagagagcagctcatcgattac
ctgatgctcaaagtctcccagccacaagcacccccccgggtcccgcaagaagcaatgcag
caagagttccgtgtgaaagtggagaagaatccagagctgggcttcagtatatcaggagga
gtgggaggacgaggaaacccctttcatccagatgacaatggcatatatgtgacaagggtc
cagcctgagggaccggcagccaagattcttcagcctggagataaaattatccaggcaaat
ggctacagctttgtgaatatcgatcacgggaacgcagtgtccctgctaaagacttttcca
agcactgtggatatgattatcttcagagaaatgcaagcatag
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