Hippoglossus stenolepis (Pacific halibut): 118126031
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Entry
118126031 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 44
KO
K24224
cilia- and flagella-associated protein 44
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118126031
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
118126031
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
NBCH_WD40
SlyX
Motif
Other DBs
NCBI-GeneID:
118126031
NCBI-ProteinID:
XP_047200489
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Position
18:complement(2041680..2052536)
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AA seq
1776 aa
AA seq
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MSETEETASVGEQAEETTEGNGDAEDKQTKQLPEDMDYDYEALHSRPSISPDSDIPENLL
HLCHSFGYESGRRANLQLLDETTLMFIAGNLLVLLDISTKEQRYLRSCSGGGIGSITVHP
SRQYFVVAEKGNQPNIIIYEYPSLRLYRILRGGTEQAYSFVEFNRDGSLLASLGSTPDFM
LTLWNWRDEEVMLSCKAISQEVYRVTFSRFNPELLTSSGSGHIKFWKMASTFTGLKLQGL
VGRFGKTASTDIEGYVELPDGKVVSGTDWGNLLLWDGNTIKVEICRKDGQSCHSGTVQPF
VLEEGQLLTIGSDGIVRGWDFETIDAADSSIDSSRFEMEPLNELEVGYNVCLSSVVKSPQ
PDSFVWFAQDSCGAIWKLDLSFTHTAPDPECLFSFHAGAIQGLDVSPNSHLMATIALDRS
VRVFDFLSNRELTISRFFQGGTALIWAPPEVSQAGGLLVTGFEDGVVRLLELFDPQRLPV
DARRQHKGDARLNLKQAFKPHSAPVTAVAYERHGDVLATGSSDCTVFFFTVGDSYRPIGW
VHVPGPVLGLQWSPHSHRENRLLVLCENGHVVELHSPDPKAEKPSKSFELPELPRRSFRF
RSIKSRIKREEEKARRHADKEKKKGDLLKESKLGEVEDEEEEEEDEELPPIYIPDPPSPL
YCGFYSQPGHFWLSMGGFDSGFLYHCRFSEKQDEDLDQQQDEPFDFLPVCDTDDDPIRSV
TFSSDMKLLLCGLHSGTIRVYLLQPGDQGLSSMKDYWALSVHDNQYGHLRHIRCSHDDNF
VLTAGEDGNIFSFSLLPPEELQTSLQRKKATVPSPRVGFEKESYAQDIEGPTADSIVAAK
LKLEKDRLQREAELKITEKKRKLAELQKKFRQVLKVNRSLPEHVRLKHEELELHPXFKEE
AERLKLQRMMEVREQLSWEKERCHIAFSKLQDWFRDSVEEANVITLVAIRSDHRVSTYSL
PSLTKSSAQLGHQDTPSCPDRDKHVTSDRRKSRTELEKDSDDLADEEVLCPKVARAAAVK
LGDRQEERLKKAAVKAEQARAKLAIRKQEWAQLYAEKPDEDYEDPQDVQNISEARENIGD
LKLKTDKDFTVPRHLMMTSGRKRAELKDLEDNMCAKQTELNGRIVALRDTKVRLVSQLRA
QAKQIHKVQQRLAAHLHRAPPILPTMLPEETPEKRLQSNRATLERYRVLREQRLKDTRED
KEEGTTRLLEQLEKEMKEKEEDDQERGEEEEEEEETSVEEGVGLTELEEELGREEEIRLL
EEQDSLLEQMETSVCRFDAELLQLRHQRLHLDLKLTLADLRQLKLYQELLLLKELETKES
SLQEKFDACIREENSIESQLEECKEQLQLKQRDIVKLQEREKALHTALRASLGDNNKFQE
FLTKVFEKKIKRVKKKEPREEEVDSDEESDEDDWDDDDDDDDDDDDDDDYDSEEGALDDS
VCPPGCDPQMFEYTLQLRERRLDLEDMLAEDKKCVEALKDECTALVKKEKQAKSSRKFVD
DDLELVNREKRQRMNELDVVVPLRLHQIEFVVDGSVPSDLSEGLVVDRTELARLERRIKQ
LQVEKSHQRDLKVHARHHHSKLLRECKDMKAQGQELEMECNKLMMMKCGRLVNLEILQTL
SGNRVLEELKQQKNRHEAAYEKEIQQWDAKVDEARQASMEVTQRNTKHLLRKKKLLEEKI
ELESKLNARGKNIQFRQFQGDKRRKNLEAIDSLQEVVRRQSSQADALRREIDVLSHKGGP
VSPPGRSQLPTPPPSTPTGTRTRLSKPQSSTSCSSG
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacagaggaaactgcttctgtcggtgaacaggccgaggaaacaactgaagga
aatggagatgctgaggacaaacaaacgaagcagctccctgaggacatggactacgactat
gaggctcttcactccagaccgtccatctcacccgactctgacatcccagagaacctcctg
cacctctgtcactccttcggatacgagagtggacgcagggcgaacctgcagctgctggat
gagacaactctgatgttcatcgcaggaaacctgctcgtcctgctggacatttccaccaag
gagcagagatacctgcgctcctgcagcggaggaggaatcggctccatcacggtacaccct
agcagacagtactttgttgtagcagagaagggaaaccagcccaacatcattatatatgaa
tatccatcgttacgactgtaccggatcctcagaggcggcacagagcaggcgtacagcttc
gtggagtttaaccgtgacggcagcctgctcgccagcctgggcagcacccccgacttcatg
ctgacgctgtggaactggagggatgaggaggtgatgctgagctgcaaggccatttctcag
gaggtgtaccgggtcacgttctccaggttcaacccagagctgctcacatcgtccggatct
ggacacatcaagttctggaaaatggcgagcacattcacaggcctgaagctgcaagggctc
gtgggacgttttgggaaaactgcatcgactgacatcgagggctacgtggagcttcctgat
ggaaaggtggtgtccggcacagactggggcaacttgctgctgtgggatggaaacaccatt
aaggtggagatctgccgaaaggacgggcagagctgccacagcgggacggttcagccgttt
gttctcgaggaaggacagctgctaaccatcggctctgatggaatagtccggggctgggac
tttgagacgatcgacgctgccgacagcagcatcgacagcagcaggtttgagatggagccc
ttgaacgagctggaggtcggatacaacgtctgcctctcgtctgtggtgaagagcccccag
cccgactccttcgtctggtttgctcaggattcctgcggagcgatctggaaactggatctt
tccttcacccacacggctcccgatccagagtgcctgttttccttccatgccggggcgatc
cagggcctggatgtgtccccgaactcccacctgatggccacgatcgctctggaccgttca
gtcagagtttttgacttcctgtccaacagagaactgaccatcagccgcttctttcagggt
ggaaccgctctcatctgggctccacctgaggtgagccaggctggaggtttgctggtgaca
ggtttcgaggacggggtcgtccgcctgctggagttgttcgaccctcagaggctgcctgta
gacgccaggcgccaacacaaaggagacgccagactgaacctcaaacaagccttcaaaccc
cacagtgcacctgtaactgctgtggcgtatgagcggcatggagacgtcttagccacaggg
agctcagactgcaccgtgttcttcttcactgtcggggactcgtaccgtcccatcggctgg
gtccacgtccctgggccggtgctggggctgcagtggtccccccactcccacagagaaaac
cggctgctcgtcctgtgtgagaacggtcacgtggtcgagctccacagtcctgatcccaaa
gctgagaagccatcgaagagctttgagctgccggagctgcctcgaagatccttcaggttc
aggagcatcaaatctcgaatcaagagagaggaggaaaaggcaagacgtcacgctgacaag
gagaagaagaagggagatttgttaaaagaatcaaagctgggagaagtagaagatgaagaa
gaggaggaggaggacgaagagttaccgcccatctacatccccgaccctccgagtcctctc
tactgtggcttctactcacagcctggacatttctggctgtcaatgggaggcttcgactca
ggtttcctgtatcactgtaggttctctgagaagcaggatgaggatctggaccaacagcag
gatgagccctttgacttcttacctgtttgtgacaccgacgatgaccccattcgctccgtc
accttcagctccgacatgaagctgttgctctgcggcctgcactcaggcaccatcagggtc
tacctgctgcagcccggggaccagggcctctcctccatgaaggactactgggccctcagt
gttcacgacaaccagtacggacacctgcggcacattcgctgtagccacgacgacaacttt
gtgctgacggcgggtgaagacggtaacatcttctccttcagcctgcttcccccggaggag
ctgcagacgagcctgcagagaaagaaggccacggttccttcacccagggtgggttttgaa
aaagagtcgtacgctcaggacatcgagggccccacagctgacagcatcgtggcggcgaaa
ctgaagctggagaaggatcgtctgcagcgggaggcggagctgaagatcacagaaaagaag
aggaagctggccgagctccagaagaagttcagacaggtgctgaaggtcaacaggagtctg
cccgagcacgttcgcctgaagcatgaggagctggagctgcaccctngtttcaaagaagag
gcagaacggttgaagttgcagcggatgatggaggtcagagagcagctgagctgggagaag
gagcgctgccacatcgcattcagcaaactgcaggactggttcagagactctgtggaggag
gccaatgtcatcaccttggttgcgatacgcagcgaccaccgagtctccacctacagtttg
ccgtcgctcaccaagtcctcagcccagctgggacatcaggacacgcccagctgtcctgac
cgagacaaacacgtcacatcagaccgcaggaaatccagaactgagcttgaaaaagacagc
gatgacctcgcagacgaggaggtgctgtgccccaaggtggctcgtgcagcagccgtcaaa
ctgggcgatcggcaagaagagaggctgaagaaggctgcggtgaaggccgagcaagctcga
gccaaattagccatcaggaagcaggaatgggcccagctttacgcagagaaaccagacgag
gactacgaggatccgcaggatgtgcagaacatcagcgaagcccgagagaacatcggagac
ttaaaactaaagaccgacaaggacttcacggtgccgagacacctgatgatgaccagtggg
aggaagagagcggagctgaaagacctggaggataatatgtgcgcgaagcagactgagctg
aatggacgaatcgtggccttgcgggacaccaaggttcgcctggtgtctcagttgagagct
caggccaagcagatccacaaggtccagcagcgtctggcggcccatctccaccgcgctcca
cccatcctgccgaccatgctgccagaggaaaccccagagaagaggctgcagagcaaccga
gcgaccctggagcgataccgtgtcctgagggaacagaggttaaaggacacacgggaggac
aaggaggaggggactacacgtttgctggagcagctggagaaagagatgaaggagaaagag
gaggatgatcaggagagaggagaagaagaagaagaggaggaggagacatcagtggaggag
ggagtggggctgactgagctggaggaggagctcggcagggaggaggagatcagactgttg
gaggagcaggactctctgctggagcagatggaaacatccgtgtgtcggtttgacgccgag
ctcctgcagctgcgtcaccagaggctgcatctggacttgaagctgacgctggccgacctc
cgtcagctgaaactctaccaggagctgctgctcctcaaggagttggagacgaaggagagc
agcctgcaggagaagttcgacgcatgcatcagggaggagaacagcatcgagtcccaactg
gaggagtgtaaggagcagctgcagctgaagcagcgggacatcgtcaagctgcaggagaga
gagaaggctctgcacaccgccctccgggcctcgctgggcgacaacaacaagtttcaagag
tttctcaccaaagtctttgagaagaaaatcaaacgcgtgaagaagaaggagccgagagag
gaagaagtggacagtgatgaagagtctgatgaggacgactgggatgacgatgacgatgac
gatgatgacgacgatgatgatgatgattacgacagtgaggaaggagctctggatgacagc
gtgtgtcctccaggctgtgaccctcagatgtttgaatacacactgcagctgcgtgagcgt
cggctggacctggaggacatgctggcggaggacaagaagtgtgttgaagctctgaaggac
gagtgtaccgccctcgtcaagaaggagaaacaggcgaagagcagtcgtaaattcgttgat
gacgacttggagttagtcaacagagagaaacggcagagaatgaacgagctggatgtggtg
gttcctctccgactgcaccagattgagtttgtcgttgacggctctgtgccatcggatctg
agcgagggtctggtggtggaccggacggagctggccaggctggagcggcgcatcaagcag
ctgcaggtggagaagtctcatcagagagatctgaaggttcacgcccggcatcatcacagc
aaactgctccgcgagtgcaaggacatgaaggctcaaggccaagagctggagatggagtgc
aacaagctgatgatgatgaagtgtgggcggctggtgaatctggagattctgcagacgctg
tcggggaacagggtgctggaggagctgaagcagcagaaaaaccgtcatgaagctgcatac
gagaaagaaatccaacagtgggatgcgaaggtggacgaggcccgccaggcttcgatggag
gtcacccagcgtaacacgaaacatctcctcagaaagaaaaagctcctcgaagagaagata
gaactggagagtaaactcaacgccagggggaaaaacattcaattcagacagttccagggc
gacaagagacgtaaaaacctggaggcgatcgacagcctgcaggaggtggtgaggaggcag
tcgagtcaggccgacgccctcaggagggagatcgacgtcctgtcccacaaaggaggcccg
gtgtccccccccggccgcagccagctgcccacgccacccccgtccacccccaccggcaca
cggacgcgtctgtccaaaccacaaagctcaaccagttgttcttctggttga
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