Hippoglossus stenolepis (Pacific halibut): 118126036
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Entry
118126036 CDS
T08308
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a
KO
K24901
homeobox protein orthopedia
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118126036 (otpa)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
118126036 (otpa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
118126036
NCBI-ProteinID:
XP_035041067
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All DBs
Position
18:17350328..17354358
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AA seq
321 aa
AA seq
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MLSHADLLDARLGMKDAAAELLGHREALKCRLGGGGPDPGHSGELGPGSDGVEGSTMLPG
DDISGGGGGGGSNTVQVNSKDQEKQQQQNSSSNPNQSGGQQSQKQKRHRTRFTPAQLNEL
ERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRSPGTLLPTH
HGLPQFQSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQLPPSLGRQQVMAQSLSQC
SLGAGPPHNSMGLSNMSSNGGGLQTHLYQPTFPGMASLSGPNNVTGSPQLCSSPDSEVWR
GTSIASLRRKALEHTVSMSFT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgctatctcatgccgacctcctggatgctcgcctcgggatgaaggatgccgcggcggag
ctcctgggccacagggaggctctgaagtgcaggctcggcggagggggacccgacccgggc
cactccggcgagctcggtccgggctcggacggcgtggagggctccacgatgctccccggt
gacgatatcagcggcggcggcggcggcggtggatccaacacggtgcaggtgaacagcaaa
gatcaggagaagcagcagcagcagaacagcagcagcaacccgaaccagtccggaggacag
cagtcccagaaacagaagcggcaccggacccgcttcaccccggcgcagctcaacgagctg
gagaggagcttcgccaaaacgcactacccagacatcttcatgcgggaggagctggctctg
aggatcggcctgacggagtcccgagtgcaggtctggttccagaaccgacgcgccaagtgg
aagaagcgcaagaagaccaccaacgtgttccgctctccgggcactctcctgccgacgcac
cacggcctgccccagttccagtccgccgcggcggcagcggcggccatgggcgacagcctc
tgctccttccacgccaacgacacccgctgggccacggcagggatgcccggcgtgtctcag
ctgcagctcccgccttctctgggtcgccagcaggtcatggcgcagtccctgtctcagtgc
agcctcggcgccgggccgccgcacaactccatgggtctctccaacatgtcgtccaacggc
ggcgggctgcagacacacctctaccagcccacgttccccgggatggcgtccttatccggc
ccgaacaacgtgaccggctcgcctcagctgtgtagctccccggacagtgaggtctggaga
gggacaagcatcgcgtcgctgcgccgcaaagcgctggagcacacagtatccatgagcttc
acctag
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