Hippoglossus stenolepis (Pacific halibut): 124851067
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Entry
124851067 CDS
T08308
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04371
Apelin signaling pathway
hsp04514
Cell adhesion molecules
hsp04520
Adherens junction
hsp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124851067
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124851067
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124851067
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124851067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
124851067
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
124851067
04090 CD molecules [BR:
hsp04090
]
124851067
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124851067
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Major cadherins
124851067
CD molecules [BR:
hsp04090
]
Proteins
124851067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
TM_ErbB1
PKD_4
Cadherin_4
Cadherin_pro
Y_Y_Y
K319L-like_PKD
Big_13
Motif
Other DBs
NCBI-GeneID:
124851067
NCBI-ProteinID:
XP_047198380
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All DBs
Position
12:1482188..1526529
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AA seq
843 aa
AA seq
DB search
MVHPDGILMVKRMVALLEGHQDFFIHSWNLHGQKITVPVTVVHYGQNDGHHHGHHTGENH
GHHQQNVEHHLGEHRHHNNQHHLNEVDSANNTENATTPEVPVLNFPKSGDGLRRRRSDWV
IPDIYVPENNKGPYPLKVAQIRSSEDKVKTISYSITGPGANEPPLGLFTMDRLTGTLYLT
QPLDREKVDRYTFKAHVAVDGSLNAEQPMDIMVIVIDQNDNKPVFDQDTFLGEVPESSPT
GFEVITVVAIDLDEPGNANSDVRYRILSQDPKFPSGPLFEINPNTGAIRVNARGLDREKY
PKHTLVIEAADMEGNGLTGNATVIITVTDSNDNPPAFTQSSYEATVPENRVDALVITMAV
TDGDEPHSPAWNTKFKIVDGDPGGLFTVTTGSNKHEGIITTAKGLDFEMISKHTLLVAVE
NDIPFVTPLPTATATVVVNVQDVNEAPVFDPVEKFVSKPENLPVDGDVVQYTASDPDITR
KQKVMYKIISDPAGWLNVAKDTGLIKVKSIMDRESHFVKDSKYTALIGAYDNDDVPATGT
GTLIIQLEDVNDNAPIIEERTIKVCYKESAPQLLSVTDKDGPGFAAPYSVSLQGMSKTNW
TARMNDSKTGIVLNLGTELESGEYTVVLRVTDNDGMEQDNTVQATVCDCTGEIVSCSGRI
AGGSSLPMILGILGGILLLLMLVLLLLLFARRRGGEKKEPLLQDDDIRDNIYYYDEEGGG
EDDQDYDLSVLHRGLDNRPEVFRNDVMPNFMPAPQYRPRPANPEEIGNFIDDNLKAADND
PTAPPYDSLLVFDYEGGGSDAGSLSSLNSSSSGDQDYNCLNEWGPRFKKLADMYGGGEDD
DML
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggtccatccagatgggatattgatggtaaagagaatggttgctcttctggaaggacac
caggacttctttatccactcctggaacttgcacggtcaaaaaattactgttccagtcaca
gtcgtgcactatggacaaaatgatggtcatcaccatggacatcacacaggggaaaaccat
gggcatcaccagcaaaatgttgagcatcacctcggagagcacagacaccacaacaatcag
caccacttgaatgaagtggactctgctaacaatacagagaatgcaaccaccccagaggtg
cctgttctgaatttccccaagtctggtgatggattgaggaggaggaggagcgactgggtt
attcctgacatctatgttcctgaaaataacaaaggaccctatcctcttaaagtagctcag
atccgttctagtgaagataaagtgaagacgatatcttacagcatcactggtccaggagct
aatgagcctccccttggccttttcacaatggacaggctcactggtactttgtatctgaca
cagcctctggacagagagaaggtggacaggtacacgtttaaagcacatgttgcggtagat
gggtcactaaatgctgagcagccgatggatattatggtgattgtaatagaccagaatgac
aacaaacctgtttttgatcaagatacatttctgggagaagttcctgaatcctcaccaaca
ggttttgaggtgataacggttgtggccatagatcttgacgagccgggtaatgccaattcg
gatgttcgttaccgtattctgagccaggatccaaagttccccagtggcccactgtttgag
atcaacccaaacactggagcaatcagagtcaatgcccgtgggctagacagagagaaatac
ccaaagcacactctggtgatagaggcagcagacatggagggaaacgggttgactggaaat
gccacagtaatcatcactgtaacagacagcaatgacaaccctccagctttcactcagtcc
tcttatgaggcaacagtaccagaaaacagagtggacgctctggtcattacgatggcagta
acagatggtgatgagccacattcaccagcctggaacaccaaattcaagattgttgatggt
gatcctggaggcctgttcacagtcacaacaggaagtaacaaacacgaagggatcattact
actgccaagggtcttgactttgaaatgatcagcaagcacactctgttggttgcagtggag
aatgacattccatttgttactccactgcccactgccacagccacagtggtggtgaacgtg
caggatgtcaacgaagctccagtctttgatccagttgaaaagtttgtgtccaaaccggag
aaccttcctgttgacggtgacgtggtgcagtacactgcttctgaccccgacattacacgc
aaacagaaagtcatgtataaaataatcagcgaccctgcgggctggctgaacgtggccaag
gacacaggcctgattaaggtgaaaagcatcatggacagagagtcgcactttgtcaaggac
agcaaatacacagcactcattggtgcatacgacaatgatgacgtcccggccacaggaact
ggtactctgattatacagcttgaagacgtcaatgacaatgcacccataattgaggaacgt
acaataaaggtgtgttacaaggaatcggctcctcagctgctttcagtaacagataaagat
ggacctggctttgctgctccatacagtgtctctttacagggcatgtccaagaccaactgg
accgctcggatgaatgattccaaaacgggcatcgtacttaatttaggcactgagctggaa
agtggagaatacactgtggtcctgagggttacagacaacgatggcatggagcaggacaac
accgtccaggccacagtgtgtgactgcacaggtgaaatcgtgtcctgttcagggcgaatt
gccggtgggagcagcctgcccatgattcttggaatactgggaggcatcctgttgctgctc
atgctggtgctgctactactgctgtttgcgagacggagaggaggagaaaagaaggagcct
cttctgcaggacgatgatatcagagacaacatctattactatgacgaggagggaggtgga
gaggacgatcaggactatgacctgagtgttctccaccgtggtctggacaaccggccagag
gtgttcaggaacgacgtgatgccaaacttcatgccggctcctcagtaccggcctcgccct
gccaacccagaggaaattggcaacttcattgatgataatttgaaggcagccgacaatgac
cccacagcgcccccctatgattccctgctggtttttgactatgagggcggtggctctgat
gcaggaagcctctcctcactgaactcgtcgagcagcggagaccaggactacaactgcctg
aacgaatggggaccccgcttcaagaaactggcagacatgtatggcggaggagaggatgat
gatatgctgtaa
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