Hippoglossus stenolepis (Pacific halibut): 124851332
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Entry
124851332 CDS
T08308
Name
(RefSeq) C-type lectin domain family 10 member A-like
KO
K06721
C-type lectin domain family 10 member A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hsp04054
]
124851332
04090 CD molecules [BR:
hsp04090
]
124851332
04091 Lectins [BR:
hsp04091
]
124851332
Pattern recognition receptors [BR:
hsp04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
124851332
CD molecules [BR:
hsp04090
]
Proteins
124851332
Lectins [BR:
hsp04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
124851332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Lectin_N
Spike_torovirin
ATG17_like
FRB_dom
OrfB_IS605
HOOK
Rx_N
DUF745
DUF4179
DUF948
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
124851332
NCBI-ProteinID:
XP_047194764
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Position
23:3487828..3490458
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AA seq
286 aa
AA seq
DB search
MIHLKETETMTCHLRMKEEEESVHWIKEPQPVSVSGVSRFRRWMVPALTVTVILVLIITL
GATNVNTSNRLWSVEKRVSNLSNVIESLSASLQNAQETAKEVQLLHSTVEDQLTSVSEAL
KQLSVIDSLSRSLTSIKCSLGQIINNGSGLDGCCPLDWKLSGFSCYFFSRSRLSWNESRV
WCEEHESHLVILSSDRDWDFVNRNAVPATFWVGLSDWRTGTWEWVDQTPYSMERRRWGPG
QPDNWTNHGLGPGEEDCAQLYIDGRLNDLHCSHQMRYICQKLIGDP
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgattcatcttaaagagacagagacgatgacatgtcacctgcgcatgaaggaagaagag
gaaagcgtccactggattaaagagcctcagcctgtctctgtctcaggtgtctccaggttc
agacgttggatggttcctgctctgacagtgacagtcatcctggttctgatcataacactg
ggagctaccaatgtgaatacgtcaaatcgtctgtggtctgtggagaagagagtttccaac
ctgagcaacgttattgagtcacttagcgcctcactgcagaacgctcaagaaactgctaaa
gaagttcagctgctgcattctactgtggaggaccagctgacctcagtgtcggaggcgttg
aagcagctgtcggtcattgactctctgagcaggagtcttacttcgatcaaatgttccctc
ggacaaatcatcaacaacggctcagggttggatggttgttgtcctctggattggaaactc
tctggctttagttgttatttcttcagccgttcccgtttgtcctggaatgagtccagagtc
tggtgtgaggaacatgaatctcacctggtcatcctctcctctgacagggactgggacttc
gtgaaccgtaacgcagtgcctgcaacattctgggtgggtctgagtgattggagaactggt
acgtgggagtgggtggaccagactccgtactccatggaacgcagacggtggggacccggt
cagcctgacaactggaccaatcacggcctcgggcccggagaagaagactgtgctcagctt
tacattgatggccgcctcaacgacctgcactgctcccatcagatgcggtacatctgccaa
aagctcatcggtgacccctga
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