Hippoglossus stenolepis (Pacific halibut): 124854658
Help
Entry
124854658 CDS
T08308
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124854658 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_Teneurin
EGF_3
EGF_DL_JAG
cEGF
Motif
Other DBs
NCBI-GeneID:
124854658
NCBI-ProteinID:
XP_047198756
LinkDB
All DBs
Position
14:17351581..17397628
Genome browser
AA seq
2503 aa
AA seq
DB search
MQHIPGLSSGRSLVLVLCFTHLSLGLQCVDNKAPCVNNATCLTFTNGTEYCRCAPGFLGE
YCQHKDPCQPGFCLNGGNCSVSMLAGVPVPGSAACSCPLGFTGLHCQTPQNSTCYPNNPC
ANQGVCTLLSLDKYKCECARGWTGPSCEHEDSCLSSPCANGGKCSSPSAGSYTCTCPPGY
TGPRCLNDTNECAATPSICQNEGACDNTPGSYKCVCGPGFTGRNCESSYIPCSPSPCLNG
GTCHQNTETSYSCHCLPGFNGSNCENNLDDCPNHQCANGGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLIGSYVCVCVNGWSGPDCSENIDDCATASCSPGSTC
IDRVASFICVCPHGKTGLLCHRDDACISNPCREGSQCDTNPISGMFNCNCPPGYVGSTCN
IDRDECSIGTNPCEHGGLCVNTDGSFTCNCARGYAGPRCEQDVNECASSPCQNDGTCLDR
IGDYSCICMPGFEGTHCEIEVDECLSSPCLNQGKCLDQVSRFVCECPAGFSGEMCQIDID
ECSSTPCLNGAKCIDRPNGYDCECAEGFTGLLCEENINDCVPEPCHHGVCKDGIATFSCE
CYPGYTGSICNIQVQECHSNPCQNRGRCIDLVNAYQCNCSPGTTGINCEINEDDCASNPC
EYGECQDGINEYKCVCAPGYTGVKCDVEINECISNPCMSGGTCTDKVNGFYCLCPPTTHG
PLCLSGTNHCAPQPCVHGECIEQQHGYRCECKAGWVGQHCDQEKDECQLSPCQNGGTCLD
RHNGYTCQCQPGFRGVNCEKNVDECASGPCLNQGFCIDGVNSYTCQCSAPFTGKNCEVEQ
APCASHPCERGGVCHPSADYTSYTCRCPAGWQGQRCRDDVDECKKNPCKNGGRCMNSQGS
YTCKCQPGYSGHNCQTDIDDCSPNPCLNGGSCLDDVGSFSCDCRAGFEGERCETEVDECA
SQPCRNSAVCRDYVNSFVCECRPGFDGILCEHNILECTESSCLNNGICIDDINTFSCRCR
PGFYGTFCEYEQNECDSQPCKNGGTCADGLGTYRCTCPMGYNGQNCQNLVNLCNQVHCHN
DGVCSQTTSSWTCHCPVRWTGLYCDVPNLSCQDFAATKGVEVENVCKNAGRCINVGNSHQ
CQCQLGYMGSYCEEMVDECRSNPCRNGATCKDYQSTYECICKPGYQGVNCEYDVDECHSK
PCLHGGTCINLINLFTCACPPGTHGLQCEVNVDDCAPKPGSWEPRCRNGGQCVDGIGRYT
CSCPPGFVGEHCEGDLNECLSGPCHAPGSLDCVQLVNNYQCRCRHGYTGRHCESMVDLCL
SRPCHNGGFCSMNMSSVHGYICSCASGFAGFNCEIEREGHCAKLHCQNGGRCVESPVGHV
YCQCQLGFTGTHCENEQRCQWFCQNGGTCVKDPSNPNQYSCRCPMYFSGRICENKLPVLP
TQTCPYAQCEMQSRDRVCDDQCNNHECHWDGGDCSLNWQQPWVNCTASVPCWDLFKNGHC
NKECDNAGCLFDGFECQETAPSPCKYDKYCADHYHDGICDKSCSTEACGWDGLDCSTDTP
PKSAVGSLIIVVRLQPKELLGDLNGFLRSLGALLHTNLHVKLDTNNQPMVYPYFREQEEQ
ERYIQRSRSKRELEREVIGSEVHLQIDNRKCAESSVDCFSNTDEAAAFIAAAHIKAELPY
PLVSVGSYDDPMPIVKPLLMYMIGVAVVIILLILVLGMLAAKRKHKNGVLWLPDGFLATK
NDKRREPVGQDDFDLKNFKTQDGALIDGGQSQRWMDEDVPSKKPRTEDKPLLPINMDGGI
DQREWTLQHRKAADIMLTPPQADLDADCLDVNVKGPDGFTPLMLASLRNGGGPDCSLQGD
EDEESGGDEPGPSVISDLISQGASLMAQTDRTGETALHLAARYARADAAKRLLDAGADPN
GHDNMGRTPLHAAVAADAQGVFQILIRNRATELDSRMNDGTTPLVLAARLAVEGMVEELI
HCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFE
AAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGGNS
VMCGANGAGFIGMRPGPQGKKSRRGGGGAKVGGVGGVAKDLKDMKAKRRKKPAGGEGPGV
AAGGGSGGGTAGGGSANGVKAAGGLPESSVTMSPVDSLESPHSYTGDVSGAVSSTANSPP
LLSSPTSRPMLPPVSHMLGQQQGWVGMAKHGYSGHMFGLVPHQMGGSHPGMGQHHGQGAM
LTPMNVTMSREQLPPIVTFQMMAPGGGQAMMKQPQPGQVQVTQSQVQNQSQARPQQTSGH
LHCSQGMMYQMPEQMSMTHGLSHTLQHPHNVGHGGIEGQPRPLPSYPPMQSPVDKYPTPP
SQHSYATAGSEGTTPGHSAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLG
NPHHALPSSRHTHIPEQVQPQPQSQQMQQASQQPQLGNMQVFA
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatccccggtttgtcctccggcaggtccctagtcctcgtcctgtgcttcacc
cacctctctctgggtctgcaatgtgtggataataaagcaccgtgtgtaaacaacgctaca
tgtctgacctttaccaatggcactgaatactgcaggtgtgcacctggctttctgggtgag
tactgccaacacaaggacccttgtcaacccggattctgcctgaatggagggaactgctca
gtgtccatgttggctggtgtacctgtaccaggcagcgccgcctgcagttgccccctgggc
ttcactggtctgcactgtcaaactccccagaactccacgtgttacccgaacaacccctgt
gccaaccaaggtgtctgcaccctgctgtccctcgacaagtacaagtgtgagtgcgccaga
ggatggacaggaccaagttgtgaacatgaagacagctgcctgtctagtccctgtgctaat
ggtggaaagtgcagctctccatctgctggaagttacacatgtacctgtcctcctggctac
acaggtcctcgctgccttaatgacacaaatgaatgtgccgccacaccctctatatgccaa
aatgaaggagcctgcgacaacacccctggctcctataagtgtgtctgtggcccggggttt
acaggccgaaattgtgaaagctcatacatcccgtgctcgccgtctccttgcttaaatgga
ggcacctgccaccagaacactgaaaccagctactcctgccactgccttccaggtttcaat
gggagtaactgtgagaacaaccttgatgactgccccaatcaccagtgtgccaatggagga
acctgtatggacggagtcaacacctacaactgtcagtgcccccctgagtggactggtcag
cactgtacagaagatgtggatgagtgtcgtctgcagccaaacacctgccagaatggaggt
acatgcagcaacctgatcggtagctacgtctgcgtgtgtgttaatgggtggagcggcccc
gactgctctgaaaacattgatgactgtgctacagcctcatgcagcccgggctccacgtgc
atcgaccgcgttgcctctttcatctgtgtctgccctcatggaaagacaggtttgctgtgc
catagagatgatgcctgtatcagtaacccctgtagagaaggctctcagtgtgacaccaac
cccatcagtggcatgttcaactgtaactgtccacctggttatgtcggcagcacctgcaac
attgacagagacgaatgcagcatcggtaccaacccttgcgagcatggtggtctgtgtgtg
aacactgatggctccttcacctgtaactgtgccaggggttacgccgggccgcgctgtgaa
caagatgttaatgagtgtgcatcaagcccctgccagaacgatggcacttgtctggatcgc
attggggactacagctgcatctgcatgcctggatttgaggggactcattgtgagatagag
gtggatgagtgtctcagctccccctgtttgaaccagggcaaatgtctggaccaggtcagc
cgctttgtctgcgaatgccctgcaggcttcagtggtgaaatgtgccagatagacattgat
gagtgctccagcacaccctgtttaaatggggccaagtgtatcgaccgacccaacggatat
gactgtgaatgtgctgaaggcttcactggcctactttgtgaggagaacatcaatgactgc
gtaccagagccatgccaccatggtgtgtgtaaagacggcatcgccaccttctcctgcgag
tgctatcctggatacacgggctccatctgtaacatccaggtccaggagtgccacagcaac
ccttgtcagaaccgaggacgctgcatcgacctggtcaatgcctaccaatgcaactgctca
ccaggaactacagggataaactgtgagatcaatgaagatgactgtgccagtaacccctgt
gagtacggcgagtgccaggacggcataaatgagtacaaatgtgtttgcgccccaggatac
acaggagttaaatgcgatgtggagatcaacgagtgtatctcaaacccgtgtatgagtggg
ggaacctgcacggacaaggtcaacgggttctactgcctgtgcccgcccactacccacggc
cctctgtgtctctctgggacaaatcactgtgctccgcagccttgtgtgcatggggaatgt
attgaacagcaacatgggtaccgctgtgagtgtaaagctggctgggtgggacagcactgt
gaccaggaaaaggacgagtgccagcttagcccatgccagaatggtggcacttgtttggac
cgacataatggctacacttgtcaatgccaacctggattcagaggtgtaaactgtgagaag
aatgttgatgaatgtgcatctggaccctgtctgaaccaaggcttctgtatagatggagtc
aacagttacacctgtcaatgtagtgcaccattcacgggtaaaaactgtgaggtggagcag
gctccctgtgcctcccatccatgtgagcgagggggagtgtgtcatccatctgcagactac
acctcttacacctgcaggtgccccgcgggttggcaaggtcagcgctgccgtgacgatgtg
gatgagtgcaaaaagaatccttgcaaaaacggtggtcgctgcatgaacagtcaaggcagc
tacacatgtaaatgtcaacctggatacagcggacacaactgtcagacagacattgatgac
tgctctcccaacccatgcctgaatggaggctcttgtttggacgatgttgggagtttctct
tgtgactgccgcgctggttttgaaggggagcgctgtgaaactgaggtagatgagtgtgcc
agtcagccctgcaggaacagtgctgtctgccgggactacgtcaacagctttgtgtgtgag
tgccgaccgggctttgatggaatcctgtgtgaacacaacatccttgaatgcactgagagc
tcctgcctgaacaatgggatttgcattgatgacatcaacaccttctcttgccgttgccgt
cctggtttttacggaacgttctgtgagtatgagcagaatgagtgcgactctcagccctgt
aagaatggaggaacctgcgccgacggcctgggcacgtatcgctgcacctgccccatggga
tacaatggacagaactgccagaaccttgtaaacctgtgcaaccaggtgcactgtcacaat
gatggtgtctgctctcagacaacgtcctcctggacttgccactgtccagtgagatggaca
ggactttactgtgatgttcccaacctttcctgccaggactttgctgccacaaaaggtgtg
gaagtggagaatgtgtgtaagaacgctggtcggtgtataaatgtgggtaattcccaccag
tgtcagtgtcagctgggatacatgggcagctactgtgaagagatggtggatgagtgccgg
tcaaacccttgtcggaacggagctacatgcaaagactatcagagcacatacgagtgtatt
tgtaaacccggctaccagggggtgaactgtgagtatgatgtggatgaatgtcactctaaa
ccctgcctgcatggagggacctgtatcaacctcataaacctcttcacctgtgcctgtcca
cctggaacacacgggctccagtgtgaagtgaatgtggatgactgcgcacccaagcctggc
tcctgggagcctcgctgtcggaacggaggacagtgtgtggacggtatcggccgttacaca
tgctcctgccctccaggattcgttggagaacactgtgagggagatctcaatgaatgcctg
tctgggccctgccacgcccccggcagcctcgactgcgtgcagctggtcaacaattaccag
tgtcgctgtcgccatggatacacgggtcgtcattgtgagtccatggtggatctgtgtcta
tctaggccatgtcacaacggtggcttctgctccatgaacatgagctcagtccatggctac
atctgctcctgtgcttctggctttgctgggttcaattgcgaaatagaaagagaaggccac
tgtgcaaagctacattgtcagaacggtggacgctgtgtggagtcaccagttggccacgtg
tactgccaatgccagttgggattcactgggacacattgtgagaatgaacagaggtgtcag
tggttctgccaaaatggaggaacctgcgtcaaggacccgtccaacccaaaccagtacagc
tgtcgttgtcccatgtacttctccggacgaatctgcgaaaacaaactccccgtactaccc
actcagacctgcccctatgcgcaatgtgagatgcagtcaagggacagagtgtgcgatgat
cagtgtaacaaccacgagtgccattgggacggaggggactgctcgctcaactggcaacag
ccttgggtgaattgcactgccagtgtcccctgctgggatctcttcaagaatggacattgt
aataaggagtgcgacaacgccggatgtctctttgacggctttgagtgccaggagactgcg
ccgagcccctgcaagtatgacaagtactgcgcagaccactaccatgatggcatctgtgac
aagagctgctccacagaggcttgtggctgggacggcctggactgttccactgacactcca
cccaaatcagcagttggctcgctgatcatcgtggtccggctgcaacccaaggaactgctt
ggagacctgaatggtttcttgcgttccctgggagccctgttgcacaccaacctgcacgtg
aagctagatacaaacaatcagccaatggtgtatccatatttcagggaacaggaggagcag
gaacgatacatacagaggagcagaagcaaacgagagctagagagagaggttattggctcg
gaggtgcacctgcaaattgacaaccgtaaatgtgcagagagttcagtcgactgtttctcc
aacacagatgaggctgcggccttcattgctgcagcacacatcaaggctgaactgccttac
ccattagtgtctgttggcagttatgatgacccgatgcctattgtgaagccgcttctcatg
tacatgattggagtggcggtggttattattctgctcattctggtgctggggatgctcgca
gccaagaggaagcataaaaatggtgttctgtggctgccagatggcttcttggccactaaa
aatgacaagagaagagaacctgttggacaagatgactttgacctgaagaatttcaagacc
caggatggagccctgattgatggaggtcagagtcaaagatggatggatgaagatgtcccc
tccaagaaaccaagaactgaagataagcctttgctgcccatcaatatggatggtggaatt
gaccaaagggagtggaccctgcagcaccgcaaggctgctgatattatgctcactccccca
caggccgacttggatgctgactgtctggatgttaatgtcaagggacctgatggcttcact
ccgctgatgttggcatcgctgcggaacggcggaggcccagactgcagcctgcagggagac
gaggatgaggagagtggaggagatgaaccagggccgagcgtcatttcagacctgatctct
cagggtgcttccctaatggcccagaccgaccgcactggagaaacggcccttcacctggct
gctcgctacgccagagctgatgctgccaagagactgctggacgctggagcagaccccaac
ggccatgacaacatgggcagaactccattgcatgctgctgtggcagctgatgcccaggga
gtcttccagattctgatccgtaatcgtgcaacagaactagattccaggatgaatgacggc
acaactcccctggtcctggcagccaggctcgctgtggagggcatggtggaggagctgatc
cactgccacgctgacattaacgctgtcgacgaccacggcaaatctgctctgcactgggca
gctgcagttaataacgtggaggccactctcgtgcttttgaagaacggagcaaaccgtgac
atgcaagacaataaggaggagaccccactcttcctggcagccagagaaggcagcttcgag
gcagctcaggttcttctcgaccactattccaaccgtgacatcaccgatcacctggatcgt
ctgccccgtgacactgcccaagaacggatgcatcatgacatcgttcgcctgctggaccag
tacaatctggttcacagtccacacaacgggccgaaccacatgggtggaggaggaaactct
gttatgtgtggtgccaatggagcgggcttcatcggcatgaggcctgggccacagggaaag
aagagcaggaggggtgggggcggagcgaaggtgggaggtgttggcggggtagctaaggac
ctgaaagacatgaaggcgaagagaaggaagaagcctgcgggaggcgaggggccgggtgtg
gctgcgggaggaggaagtgggggaggtacagcgggaggagggagtgcgaatggcgtcaaa
gcagcaggaggacttccagagagctctgtcaccatgtcaccagtcgactcactggaatcg
ccacactcatacacaggcgacgtgtccggcgccgtctcctcaacagcaaactctcctccc
ctcctgagcagccccacatccagaccgatgctgccccccgtcagccacatgctggggcag
cagcagggctgggtgggcatggccaagcacggctacagcggccacatgtttggcctcgta
ccgcaccagatggggggatctcacccaggcatgggccaacaccacggtcagggtgcgatg
ctgacgcccatgaatgtcaccatgagcagagagcagctgccgccgattgtcaccttccag
atgatggctcccggaggaggccaggcgatgatgaagcagcctcagccagggcaggtacaa
gtcacacaatcccaggtgcagaaccagagtcaggctcgcccccagcagacatcaggccac
ctccactgcagccagggaatgatgtaccagatgcctgagcagatgagcatgacgcacggg
ctctcccacaccctgcagcatccacacaacgtcggccacggagggatcgagggccagcct
cgaccactgccctcctatccgcccatgcagagccctgtggataaataccccacgcccccc
tcccagcacagctacgccaccgccggttccgagggtaccactcccggccactctgcccac
ccgcccagcgagcacccatatctcaccccttcaccggagtccccagacccttggtcgtcc
tcttcgccgcactccaactcagactggtctgacgtcaccaccagccccacccctctgggg
aacccccaccacgcactgccatcatcccgccacacacacattccagagcaggtgcagccg
cagccgcagtcgcagcagatgcagcaggcctctcaacagcctcagctcggaaacatgcag
gtgtttgcgtag
DBGET
integrated database retrieval system
