Hippoglossus stenolepis (Pacific halibut): 124854672
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Entry
124854672 CDS
T08308
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03320
PPAR signaling pathway
hsp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124854672 (rxrgb)
03320 PPAR signaling pathway
124854672 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
124854672 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hsp03310
]
124854672 (rxrgb)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
124854672 (rxrgb)
Nuclear receptors [BR:
hsp03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
124854672 (rxrgb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
124854672
NCBI-ProteinID:
XP_047198817
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All DBs
Position
14:complement(16417988..16444762)
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AA seq
467 aa
AA seq
DB search
MWHPVASPATGGSTGREIGYGHYSTGPMSAAHTHPPPMGGMVGHPSVISSSRPLQSPMST
LGSSMNGLASPYPVITSSLGSPCVSLPSTPNMNFGPLCSPQMNSMNSVSSSEDIKPPPGL
QNLGNINYQCTSPGGMSKHICAICGDRSSGKGKHYGVYSCEGCKGFFKRTVRKDLTYTCR
DMKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGEIEVESTSSFNEEMPV
DKILDAELAVEPKTETYIEGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVS
KMKDMQMDKTELGCLRAIVLFNPDAKGLSNPQEVEGLREKVYASLESYTKQKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccctgtggcgtcacctgcaactggaggaagcactgggagggagataggttat
ggtcactactctacggggccaatgagtgcggcccacacccacccgccccccatgggtggc
atggtggggcacccgtcagtcatcagcagctccaggcccctgcagtcccccatgtccacc
ctgggctcgtcgatgaacggcctggcctcaccctaccccgtcatcacatcgtccctgggc
tctccctgtgtatcgctgccgtccacgcccaacatgaactttggtcctctctgcagtcca
cagatgaactctatgaacagcgtcagcagctcggaggacatcaagcctccgccggggctg
cagaacctggggaacatcaactaccagtgtaccagccccgggggaatgtccaagcacatc
tgtgccatctgcggggaccgctcctcaggtaaggggaagcactacggtgtgtacagctgt
gagggatgcaaaggcttcttcaagaggaccgtccgaaaagacctcacctacacgtgtcga
gacatgaaggagtgcctgattgacaagcgccagagaaaccgctgccaatactgtcgctac
cagaagtgcctggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgtggg
aaggagcggggggagatcgaggtggaatctaccagcagtttcaacgaggagatgcctgtt
gacaagatcctggatgccgagctggcggtggagcccaaaacagagacgtacatcgagggc
agccccggaaactctacgaacgaccccgtcaccaatatctgccaggcagcagacaagcag
ctcttcaccctggtggagtgggccaaaaggatcccgcacttctccgaactcccgctcgat
gaccaggtcatcctactacgagcaggctggaacgagctcctcatcgcctcgttctcacat
cgctcagtcacggtaaaagacggcatcctgttggcgacgggcctccatgtccacagaagc
agtgcccacagtgcaggagtgggctccatctttgatagagtactgacagagctggtatct
aaaatgaaagatatgcagatggataagacagagctcggctgcctgcgagccatcgtcctc
ttcaacccagatgcaaaaggtctttcaaacccacaagaggtcgaggggctgagggaaaaa
gtctatgcctcgttggagtcatatactaaacagaaatacccagatcagcctggcaggttt
gctaaactgctgctccgcctgcccgccctccgctccatcggcctcaagtgcctggagcat
ctgtttttcttcaagctgatcggggacacgcccatcgacaccttcctgatggagatgctg
gaggcgccgcatcagatcacatga
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