Hippoglossus stenolepis (Pacific halibut): 124854760
Help
Entry
124854760 CDS
T08308
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hsp03029
]
124854760 (polrmt)
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124854760 (polrmt)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
124854760 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
124854760
NCBI-ProteinID:
XP_047199083
LinkDB
All DBs
Position
14:18467518..18516409
Genome browser
AA seq
1324 aa
AA seq
DB search
MSVLRVCALAQSLSRRSLLEKCTLRGYSADCCRLCASLRSGAVRRISETPLQLQRRNVSF
VIPKTEAAKKRVLEQSQLFDVLEARIQQLQTDIVLDIQHAEVQVVKAGSSGRGVSSSWGP
KSTSKEKIVIPKSGAKGTSKPQQSRWIEKLALEKKEKLKIQQGVKQTDKRKPTAKSKGSK
SSSQILPGTSHKTISTTAKKTIPAIKTNRGCTKVSDKIHAAVYSKATSTAATAHNVSKGK
WKDSKNQHHGEKEQNRTDYAQSKATELAEVEKLERRLSQQANQSKSSSVPERPQVDSEER
ASGDMQMSIRSYLEACVFAGDIERANHFLLSQHRVIRRRKLLNTDIYNILMRVWAKKCLL
HQIGRIFILLEEAGLKPNLGSYCAALECMGRSPSCTPKVVTRCLNQMQQDGLSVDDVFSQ
CVFRQDEKDMVLKAMRMIQPDYQPCLKLTTNEGYTSLVQDFYTQRIDHHYPKLDFTQEEL
HKGFKRQLHVEQACTATIPSVEADKPVTENMAKMRALLAEQRAQWQKSLLQALRETKMIL
ASTNTKDYRLNLYPYLCLLEDREYVDIMIQSVANLPPSGDSLKILAGDLGNRVYTKYSVR
QKQQNQMVEKLGKIYCSYTELLAKDTKEYDVLPREQWCNLEMELTSGPMLQGGETSWPYI
VTLELGTCLVDMMVKNLKINSDILNPAQERKHIPVLYHMYTFRSIRQIGFIKLHPILSQM
QQEAMETELTFDSCVMPMLCPPVPWTSVKFGAYLLTPAKLMRTVDGAVQHEVLLEKCQNL
HAVLDSLNQLGSCAWRINKPLLDIIISIFNDRGNDKLDIPPPLSEAPKLPHFNPQDPNHT
ASEKAHMRREVVMAKKKYSEMHSLRMDALYKLSIANHMRDETFWFPHNMDFRGRTYPCPP
YFNHLGSDVTRAILLFAEGKPLGPKGLDWLKIHFVNLTGLKKRSSLQGRLEYANTIMEDI
LDSADNPLNGKKWWMNADEPWQALACCMEIATAVRSPDPTQFISNFPVHQDGSCNGLQHY
AALGRDVIGATSVNLLPCDVPQDVYSGVAQQVEEFRAEDAESGVKIAKVLEGFISRKVVK
QTVMTVVYGVTRYGGRLQIEKRLKEIDEFPKEHVWDASHYLVRLVFTGLKEMFTGTREIQ
DWLTESARLISKSGHTVEWVTPLGLPIIQPYHRTRNQMMKSIMQHINLKINHDIKERPDT
VKQKNAFPPNFIHSLDSTHMMLTSLHCYSAGLTFVSVHDCFWTHALTVDTMNKVCREQFV
ALHSQPILEDLSNFLLQKYCNRLQTEAKNKKYQEYRRLLLLLAKVPQTGDFDLEQVKEST
YFFS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcctcagagtctgtgccttagctcaaagtctcagtcgccgcagtttgttggag
aagtgcacacttcgcgggtattctgcggactgttgtcggctgtgtgcgtcattgagaagc
ggcgcagtcagacgaatctcagagacacctctccagcttcagagaagaaatgtgtcgttt
gttatcccaaagacagaagctgcaaaaaagcgtgtgttggaacagtctcaactgtttgac
gtgcttgaggccaggatccagcaactccagaccgacattgttctcgacatccaacatgct
gaggtgcaagttgttaaagccggctcctctggaagaggggtttcatctagttggggtccc
aaaagcacgtctaaggagaagattgtcattcctaaatcaggagctaaaggaacttctaaa
cctcagcaaagccgctggattgaaaagttagctctggagaaaaaagaaaaacttaaaata
cagcagggagttaagcaaaccgataagaggaaaccaaccgccaaatcaaaagggagcaaa
agcagctcccagatcctaccaggcacatcacataaaactatatctaccacagctaaaaag
accatacctgcgattaagacaaacagaggatgcacaaaagtatcagataaaattcatgct
gcggtttattcaaaagccacttccactgcagccacagcacataatgtttctaaagggaag
tggaaggactctaaaaatcagcatcatggggaaaaggagcaaaatcggactgattatgct
cagagcaaagctacggagctggctgaggtggaaaagttggagaggaggctcagtcaacag
gcgaaccagtcgaagtcctctagtgttccagagcgcccacaggtggacagtgaagagcgt
gcaagtggggacatgcagatgagcatccgctcctacctggaggcgtgtgtgtttgcgggg
gacattgagagagcaaaccatttcctgctcagccagcacagagtaatacgtcgacggaaa
cttctgaacacggatatttacaacatcctgatgagggtgtgggctaagaagtgcttatta
catcagatcggtcgcatatttattctgttagaggaggctggtcttaagccaaacctggga
tcctactgtgctgccctggagtgtatgggccgcagtcccagctgcaccccaaaagtcgtc
acgaggtgcctgaatcagatgcagcaggacggtctgtctgtggatgatgtgttcagccag
tgtgtgtttcgacaagatgagaaagacatggtgctgaaggccatgcgcatgatccagccc
gactaccaaccctgcctcaagctgacgacaaacgagggctatacatcattggttcaggac
ttttacacacagagaatagaccaccactaccccaaactggacttcactcaggaggagctc
cacaagggtttcaaacgtcagctccatgtggagcaggcctgcactgccaccatcccctca
gtggaggctgacaagcctgtcactgaaaacatggccaaaatgagggcgctgctggccgag
cagcgggctcaatggcagaagagcctcctccaggccctgagggagaccaagatgatcctg
gccagcacaaacaccaaggactacaggctcaacctttatccctacctctgtctgctggag
gatcgagagtatgttgacatcatgatacagagtgttgccaacctgcctcccagtggagat
tcgctgaagattttagccggagatctgggcaacagggtctataccaagtattctgtgcga
cagaaacagcagaatcagatggtggagaagctgggcaaaatctactgcagttacacggag
ctgctggccaaagataccaaggagtatgacgtccttcccagggagcagtggtgtaacctg
gagatggagctgacttcaggacccatgttgcaggggggcgagacaagctggccgtacata
gtgactctggagctgggcacatgcttggtggatatgatggtgaagaaccttaaaattaat
agtgacatcctgaacccagcccaagaaaggaagcacatccccgtcctctaccacatgtac
accttccgcagcatccgacagatcggtttcatcaagctccaccccatcctgtctcagatg
caacaggaagccatggagaccgagctgacctttgactcatgcgtgatgccgatgctgtgc
cctcctgtgccctggacttctgtgaagtttggagcctacctgctgacaccggctaagctg
atgcgcacagtggacggggccgtccaacacgaggtgttgctggagaaatgccagaacctc
cacgcagtcctggactctctcaaccagctgggcagctgtgcctggaggatcaacaaacct
ctgttggatataattatctccatcttcaatgaccggggaaatgataagctagacatccct
cctccactatcggaggcccccaaattaccccacttcaatcctcaagatcccaatcacaca
gcttctgagaaggcccatatgagaagagaggtggtcatggccaaaaagaaatacagtgag
atgcacagcctgcgtatggatgccctctataaactctccatcgccaaccacatgcgggat
gagactttctggttccctcacaacatggacttcaggggtcgtacctacccctgtcctcca
tactttaatcacctagggagtgatgtgactcgggccatccttttgtttgcggaggggaag
cccctcggtcccaagggccttgactggctaaagatccactttgtcaatctgacagggtta
aagaagaggagctcactacagggacggctggagtacgccaacacaatcatggaggacata
ctggactctgccgacaaccctctcaatggtaagaagtggtggatgaatgcggatgagcct
tggcaggctctggcatgctgcatggaaatagccacggctgtgagatctcccgatccaaca
cagttcatctccaactttcctgttcatcaggacggctcctgtaatgggctccagcactac
gccgctttaggcagggatgtgattggtgccacctcagtcaacctcttgccctgtgacgtg
ccccaggatgtgtacagcggagtagcacagcaggtggaggagttccgagctgaggatgca
gagagtggcgtgaagatcgccaaggtcctggagggcttcatcagcaggaaggtggtcaaa
cagacggtgatgactgtggtgtacggggtgacacgttacgggggacgcctccagatagag
aagagactgaaggagattgatgagttccccaaggagcatgtctgggatgcgtcccattac
ctggtacgactggtgttcactggcctaaaagagatgtttacagggaccagagagatccag
gattggctgacagagagcgccaggctcatctccaagtctggccacactgtggagtgggtg
acacccctgggtttacccatcattcagccttaccatcgcacacgcaaccaaatgatgaag
agtatcatgcaacatatcaacctcaaaatcaaccatgacatcaaagagcggccggacacg
gtcaaacagaagaacgccttcccgccaaacttcatccactccctggactccacccacatg
atgctgacttctctccactgctacagcgctggtctgacattcgtctcggttcacgactgt
ttctggacccacgccctcaccgtggacaccatgaacaaggtctgtagggagcagtttgtc
gccctgcacagccagccaatcctggaggacctgtccaacttcctgctacagaaatactgc
aatcggctccagactgaggccaagaacaagaagtaccaggagtacaggaggctgctgctg
cttctggccaaagtgccccagacaggtgattttgacctcgagcaggtgaaagaatccact
tatttcttcagctga
DBGET
integrated database retrieval system
