Hippoglossus stenolepis (Pacific halibut): 124854804
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Entry
124854804 CDS
T08308
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
124854804 (lingo3a)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124854804 (lingo3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_6
LRR_9
Ig_2
LRR_LRWD1
LRRNT
Cupin_1
V-set
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
124854804
NCBI-ProteinID:
XP_047199173
LinkDB
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Position
14:17716927..17752674
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AA seq
608 aa
AA seq
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MGLNLNQDWLLPFLFLLLMITVSPIHSQGCPQRCDCIPKLKTVSCFGKRLSALPEGIPQD
SKILDLSGNKLRWVEHGDLLSYPRLEKLDLSDNMISALEPNAFSTLQNLQSLSLRGNQLK
LVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGLVG
LKELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISALEDQNFRKLGNLRGLEINHWPFL
EHISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDLVR
LKELHMVNTNLVVVQPYALGGLRQIRLLNLSTNSLVTLEEGAFQSVNTLETLRLDGNPLA
CDCRLLWILQRRKTLNFDGASPVCMTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRKLQ
QITAREGQVVSFICRAEGEPIPVVFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVTDS
GTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTLDL
KTILISTAMGCIMFLGVVLFCFILLFVWSRGKGQHKNNFSVEYSFRKVEGPAASGGQGGA
RKFNMKMI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggggctgaacctgaaccaggactggctcctgcctttcctattcttgctgctgatgatc
actgtgtcaccgattcacagccagggatgtccacaacgttgcgactgcatcccgaagctc
aagaccgtgtcgtgtttcggcaaacgcctgtccgcactgccagaaggcatcccacaggac
tccaagatcctggatctaagtggaaacaaactccgctgggtggagcacggagacctgctt
tcgtatccccgccttgaaaagctggacttgagtgacaacatgattagtgccctagaaccg
aatgctttttctactctccagaacctgcagtcgctgtcgctgaggggcaaccagctgaaa
ctggtcccaatgggggctttctcacgtctctccaacctgacgtcactggacctcagtggg
aataagatcgtgattcttttggactttactttccaggacctgaaaagcctaaaaaactta
gaagttggagacaatgatctggtttatatctccaacaaggccttcctgggtctcgtgggg
ctgaaggagctgaccatcgagaggtgcaacctgacgtctgtgtccagccagtctctctct
tatctgcataacctggtgactctgcggctccgctacctcagcatctctgccttagaagac
cagaacttccgcaagctgggaaacctgagggggctcgagatcaaccactggccctttctg
gagcacatttcccctcacagcctgcaggggcttaacttgtcctggttgtctatcacacac
actaacatcacgtctgtgccgacctccgccctgcgcagtctggcccacctcaccagcctc
aacctctcctacaaccccatctctgtgttggagtcctgggcgctgcgggaccttgtcagg
ctgaaggagctgcatatggtcaacacgaacctggtagtagtgcagccatacgcactgggc
ggtctaaggcagatccgccttcttaacctctccactaacagcctggtgaccctggaggag
ggagcgtttcaatctgtcaacactctggagacactgcgtctggatggaaaccctctcgcc
tgtgactgccgcctgctctggatcctccagcgcaggaagacccttaattttgacggtgcc
tccccggtgtgtatgacgcctgtcgaggtgcaaggacgggcactcaacgccttctctgac
tcggccctctttgaccacttcacttgccagaagcccaaaatccgcaacaggaaactgcag
cagataactgcccgcgagggacaggtggtgtcgttcatatgcagagctgaaggcgagcct
ataccagtggtattctggatctcccctcagcgccgccgcatcaccacaaagagcagcggg
cgcttaactgtgttaccagaaggcacgctagaaatacggtacgcccaggtgacagacagt
ggaacctacatctgcatagccagtaacgctggtggaaatgacacctattttgccactctg
acagtgagcgggctgccgctagacgcagccctcatggccaaccgcacttactatgccggg
gatcttaatgacactaatctaaacgacaccagagtcttcttgaagtttaccctggacctc
aagaccatcctcatatccacagctatgggctgcatcatgttcctgggtgtggtcctgttc
tgcttcatcctgctgtttgtgtggagtcgagggaaggggcagcacaagaacaatttctcg
gtggaatactccttcaggaaagtggagggacctgctgcgagcggaggacagggcggggcg
cgcaagttcaacatgaagatgatttga
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