Hippoglossus stenolepis (Pacific halibut): 124854861
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Entry
124854861 CDS
T08308
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124854861 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
124854861 (taf6)
03036 Chromosome and associated proteins [BR:
hsp03036
]
124854861 (taf6)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124854861 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
124854861 (taf6)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124854861 (taf6)
STAGA complex
124854861 (taf6)
TFTC complex
124854861 (taf6)
SAGA complex
124854861 (taf6)
SLIK complex
124854861 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
Bromo_TP
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
124854861
NCBI-ProteinID:
XP_047199438
LinkDB
All DBs
Position
15:complement(10282681..10288800)
Genome browser
AA seq
638 aa
AA seq
DB search
MAEERRQKQCTVVVPTESMKAIAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQDFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPSIPENPPPASKEQQKTESTEPLKVVKPGQEDDASIQG
KGQGAMAVDGKGKDKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKT
QWTTRYGCIAGLAELGADVIKTLILPRLTIEGARIKAVMEGPVVSNIDKIGADHVQSLLL
KHCASVIAKIRPQPDNVEQYRVDYGYLGPMLCSHVMKARTQAALQAQQVNRTTLTITQPR
PTLSVSQSGMGGSTGSRTPSIIKVPSSLTLMSPRPGTPSQPSPPATKYIVMATSAGAAST
QQVITLSSSQSASSITSTVPSASSALQPLVKLESGSGPGLTASRPLQKYIVVSLPSSASS
SLEPKSSVLPTSISSTLLDAGMKMERSESPGASTQSPH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaacgacggcagaagcagtgtacggtcgtcgtgcccacagagtctatgaag
gccatagcagagtctgttggggtgggacagttgcaagaggagagctgtgtagcattaagt
gaggaggtcagctacagaataaaagaaattgcacaggatgctctcaaattcatgcatcat
gggaagagacgtaaattaaccaccagtgacatagataatgctctcaaactaaaaaatgta
gagccactgtatgggttccagtcgcaagattttatcccttttcgcttcgcaagcggtggt
ggaagagagcttcatttctatgaggaaaaggaagtcgacctcagtgacattataaacaca
ccactccccagagttccactagatgtgtctctcaaagcgcattggttaagtattgagggg
gtgcagccttctattccagaaaatccaccaccagcatcaaaagaacaacaaaagactgaa
tcgacagaacctctcaaagtcgtcaaacctggccaggaggatgatgcttcgattcaaggc
aaaggtcagggagcaatggctgttgatggcaaaggaaaagataagggtctaataaggttg
aagccacgcagcactcatgaactgtctgtggagcagcagctctactacaaggagatcaca
gaagcatgtgttggctcctgtgaagctaaaagagcggaagctcttcagagtattgctaca
gatcctggactgtatcagatgcttccaagattcagcacattcatttctgaaggagttcgt
gtaaacgttgtgcaaaacaacttggctctgctgatttatctaatgcggatggtcaaagct
ctaatggacaaccccaccctttatttggagaaatacctgcacgagctcatcccagctgtg
gtgacctgtattgtgagtaagcagctgtgtttgcgaccagatgttgacaaccactgggct
ttacgagactttgccgctcgtctcatggcccaaagctgtaaaaccttcagcactacgacc
aacaacatccagtcccgcatcaccaagacttttactaagagttggttggatgaaaaaact
cagtggacaacacgttatggctgcatcgctggacttgcagaactgggagctgatgtgata
aagacgttgattcttcctcggcttactatagagggggctcgcatcaaagcggtgatggaa
ggaccagtggtctccaacattgataagatcggagctgaccatgttcaaagccttttactg
aaacactgtgcaagtgttattgccaagatcagacctcagcccgacaatgtggagcagtat
cgggtggactacggttacctcggaccaatgctttgctcccatgtgatgaaagccaggact
caagcagcacttcaagctcaacaagtcaacagaaccacattaacaatcacacagcctcga
cccactctgtctgtctcacaaagcgggatgggtggctcgactggatctcgcactcccagc
atcatcaaggttcccagctccctcaccctgatgtcccctcggccggggaccccatcgcag
ccatcaccgccggcaacaaagtatatcgtcatggcaaccagtgcaggcgccgcctcaact
cagcaggtcatcaccctcagctcttcccagtcagcctcatcaataaccagcactgttccc
agtgcctcctcagccttgcagcctttagtaaaactggagtctggcagcggccctggactg
acagcttcacgacctctgcagaagtacatagtggtatctctgccctcatctgcctcttcc
tctttggagcccaagagctccgtgctcccaacctcaatttcctcaaccctgctagacgct
gggatgaagatggagcggtccgagtctcccggagcgagcacacagtcgccacactga
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integrated database retrieval system
